CuGenDBv2

Gene ID	Sgr016460
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Helicase ATP-binding domain-containing protein
Genome location	tig00152936:194220..194516
RNA-Seq Expression	Sgr016460
Synteny	Sgr016460
Gene Ontology terms	GO:0005681 - spliceosomal complex (cellular component) GO:0004386 - helicase activity (molecular function)
InterPro domains	IPR045055 - DNA2/NAM7-like helicase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593882.1 putative RNA helicase SDE3, partial [Cucurbita argyrosperma subsp. sororia]

7.5e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

KAG7026229.1 putative RNA helicase SDE3 [Cucurbita argyrosperma subsp. argyrosperma]

7.5e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

XP_022930285.1 probable RNA helicase SDE3 isoform X1 [Cucurbita moschata]

7.5e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

XP_023514523.1 probable RNA helicase SDE3 isoform X1 [Cucurbita pepo subsp. pepo]

7.5e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

XP_023514524.1 probable RNA helicase SDE3 isoform X2 [Cucurbita pepo subsp. pepo]

7.5e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K8W3 Uncharacterized protein

1.4e-42

90.22

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+DKGEISYIDYEDD+SVCSYNPIEEGPI++SVPFAFVNGKP+SVFVGETVAD+ITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

A0A6J1EPZ6 probable RNA helicase SDE3 isoform X2

3.6e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

A0A6J1EUN8 probable RNA helicase SDE3 isoform X3

3.6e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

A0A6J1EWJ1 probable RNA helicase SDE3 isoform X1

3.6e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

A0A6J1KGL5 probable RNA helicase SDE3

3.6e-43

92.39

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        MGT+GD WGDDCSVI+D+GEISYIDYEDDKSVCSYNPIEEGPI+ISVPFAFVNGKPQSVFVGE+VADAITIKNTT+ESVDLWAVNIYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

SwissProt top hits

e value

%identity

Alignment

Q8GYD9 Probable RNA helicase SDE3

5.3e-23

59.78

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Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        M   G K  D+ SVI DKGEI +IDY++D S   YNP +EGP+V+SVPF F   KPQSV VGET  D+ T+KNT +E VDLW   IYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

Arabidopsis top hits

e value

%identity

Alignment

AT1G05460.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

3.7e-24

59.78

Show/hide

Query:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE
        M   G K  D+ SVI DKGEI +IDY++D S   YNP +EGP+V+SVPF F   KPQSV VGET  D+ T+KNT +E VDLW   IYASNPE
Subjt:  MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPE

Sequences

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CDS sequence

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ATGGGTACGGTTGGTGATAAGTGGGGCGACGATTGCTCTGTCATTAGAGATAAAGGAGAGATTTCCTATATCGACTATGAAGATGATAAATCTGTTTGCAGTTATAATCC
TATTGAGGAAGGTCCAATTGTTATTTCAGTCCCATTTGCTTTTGTGAATGGCAAACCCCAATCAGTTTTCGTCGGAGAAACGGTGGCAGATGCAATTACCATCAAGAACA
CCACTGAGGAATCGGTGGACCTATGGGCTGTTAATATTTATGCATCCAATCCTGAAACTCTTTTACACTCTCTCTAA

mRNA sequence

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Protein sequence

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MGTVGDKWGDDCSVIRDKGEISYIDYEDDKSVCSYNPIEEGPIVISVPFAFVNGKPQSVFVGETVADAITIKNTTEESVDLWAVNIYASNPETLLHSL

Sgr016460 (gene) of Monk fruit (Qingpiguo) v1 genome