CuGenDBv2

Gene ID	Sgr016760
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	DNA excision repair protein ERCC-1
Genome location	tig00153002:988673..992515
RNA-Seq Expression	Sgr016760
Synteny	Sgr016760
Gene Ontology terms	GO:0000710 - meiotic mismatch repair (biological process) GO:0006296 - nucleotide-excision repair, DNA incision, 5'-to lesion (biological process) GO:0006312 - mitotic recombination (biological process) GO:0070914 - UV-damage excision repair (biological process) GO:0000110 - nucleotide-excision repair factor 1 complex (cellular component) GO:0070522 - ERCC4-ERCC1 complex (cellular component) GO:0003684 - damaged DNA binding (molecular function) GO:0003697 - single-stranded DNA binding (molecular function) GO:0004518 - nuclease activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035007.1 DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa]

1.9e-29

83.49

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR
        QT HKKSKTIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPP      S SSSQSLPAS  TN RKNDQLDTSSSSTSAS A P NSLS SSS SR
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR

Query:  NAILVSNRQ
        NAILVSNRQ
Subjt:  NAILVSNRQ

TYK02347.1 DNA excision repair protein ERCC-1 [Cucumis melo var. makuwa]

1.9e-29

83.49

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR
        QT HKKSKTIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPP      S SSSQSLPAS  TN RKNDQLDTSSSSTSAS A P NSLS SSS SR
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR

Query:  NAILVSNRQ
        NAILVSNRQ
Subjt:  NAILVSNRQ

XP_008463078.1 PREDICTED: DNA excision repair protein ERCC-1 [Cucumis melo]

1.9e-29

83.49

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR
        QT HKKSKTIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPP      S SSSQSLPAS  TN RKNDQLDTSSSSTSAS A P NSLS SSS SR
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR

Query:  NAILVSNRQ
        NAILVSNRQ
Subjt:  NAILVSNRQ

XP_022159707.1 DNA excision repair protein ERCC-1 isoform X1 [Momordica charantia]

1.1e-29

82.88

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS
        QT HKKSKTIIKIPSYQEV E SQPK QSFSQAF+FLKSSEFYSPP N   ASASSSQ LP S+ TN RKNDQL+TSSSST  SASAAAPTNSLSGSSS+
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS

Query:  SRNAILVSNRQ
        +RNAILVSNRQ
Subjt:  SRNAILVSNRQ

XP_022159708.1 DNA excision repair protein ERCC-1 isoform X2 [Momordica charantia]

1.1e-29

82.88

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS
        QT HKKSKTIIKIPSYQEV E SQPK QSFSQAF+FLKSSEFYSPP N   ASASSSQ LP S+ TN RKNDQL+TSSSST  SASAAAPTNSLSGSSS+
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS

Query:  SRNAILVSNRQ
        +RNAILVSNRQ
Subjt:  SRNAILVSNRQ

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIE0 DNA excision repair protein ERCC-1

9.2e-30

83.49

Show/hide

Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR
        QT HKKSKTIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPP      S SSSQSLPAS  TN RKNDQLDTSSSSTSAS A P NSLS SSS SR
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR

Query:  NAILVSNRQ
        NAILVSNRQ
Subjt:  NAILVSNRQ

A0A5A7T0A2 DNA excision repair protein ERCC-1

9.2e-30

83.49

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR
        QT HKKSKTIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPP      S SSSQSLPAS  TN RKNDQLDTSSSSTSAS A P NSLS SSS SR
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR

Query:  NAILVSNRQ
        NAILVSNRQ
Subjt:  NAILVSNRQ

A0A5D3BSF5 DNA excision repair protein ERCC-1

9.2e-30

83.49

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR
        QT HKKSKTIIKIPSYQEV +SSQPKSQSFSQAFAFLKSSEFYSPP      S SSSQSLPAS  TN RKNDQLDTSSSSTSAS A P NSLS SSS SR
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSR

Query:  NAILVSNRQ
        NAILVSNRQ
Subjt:  NAILVSNRQ

A0A6J1DZL1 DNA excision repair protein ERCC-1 isoform X2

5.4e-30

82.88

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS
        QT HKKSKTIIKIPSYQEV E SQPK QSFSQAF+FLKSSEFYSPP N   ASASSSQ LP S+ TN RKNDQL+TSSSST  SASAAAPTNSLSGSSS+
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS

Query:  SRNAILVSNRQ
        +RNAILVSNRQ
Subjt:  SRNAILVSNRQ

A0A6J1E0J7 DNA excision repair protein ERCC-1 isoform X1

5.4e-30

82.88

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Query:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS
        QT HKKSKTIIKIPSYQEV E SQPK QSFSQAF+FLKSSEFYSPP N   ASASSSQ LP S+ TN RKNDQL+TSSSST  SASAAAPTNSLSGSSS+
Subjt:  QTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSST--SASAAAPTNSLSGSSSS

Query:  SRNAILVSNRQ
        +RNAILVSNRQ
Subjt:  SRNAILVSNRQ

SwissProt top hits

e value

%identity

Alignment

Q9MA98 DNA excision repair protein ERCC-1

5.0e-09

47.9

Show/hide

Query:  QTAHK-KSKTIIKIPSYQEVHESSQPK---------SQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTN
        Q A K K++ +I +PSYQEV ESSQ K         SQSFSQAFAF+KSS+ YSPP  S SA+ASSSQ   AS+  +   + Q   +  ++S+S    T 
Subjt:  QTAHK-KSKTIIKIPSYQEVHESSQPK---------SQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTN

Query:  SLSGSSSSSRNAILVSNRQ
        S+  +++ +RNAILVS+RQ
Subjt:  SLSGSSSSSRNAILVSNRQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G05210.1 nucleotide repair protein, putative

3.6e-10

47.9

Show/hide

Query:  QTAHK-KSKTIIKIPSYQEVHESSQPK---------SQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTN
        Q A K K++ +I +PSYQEV ESSQ K         SQSFSQAFAF+KSS+ YSPP  S SA+ASSSQ   AS+  +   + Q   +  ++S+S    T 
Subjt:  QTAHK-KSKTIIKIPSYQEVHESSQPK---------SQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTN

Query:  SLSGSSSSSRNAILVSNRQ
        S+  +++ +RNAILVS+RQ
Subjt:  SLSGSSSSSRNAILVSNRQ

Sequences

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CDS sequence

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ATGAAAAAGAGATTGCAGACTGCCCACAAAAAGAGCAAGACCATTATCAAGATACCATCTTATCAAGAAGTCCACGAGAGCTCACAGCCCAAATCACAATCCTTCTCCCA
AGCCTTTGCTTTCCTCAAATCCTCTGAATTTTACTCTCCTCCACTGAACTCAGCTTCTGCCTCTGCCTCCTCCTCTCAGTCCTTGCCGGCGTCTGAAACAACAAACCTAA
GAAAAAATGATCAATTGGATACTTCATCTTCTTCAACATCAGCTTCTGCAGCTGCTCCAACTAACAGCTTGTCGGGGTCGAGCTCCTCTAGTCGCAATGCTATTCTTGTG
AGCAATAGACAG

mRNA sequence

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Protein sequence

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MKKRLQTAHKKSKTIIKIPSYQEVHESSQPKSQSFSQAFAFLKSSEFYSPPLNSASASASSSQSLPASETTNLRKNDQLDTSSSSTSASAAAPTNSLSGSSSSSRNAILV
SNRQ

Sgr016760 (gene) of Monk fruit (Qingpiguo) v1 genome