CuGenDBv2

Gene ID	Sgr016960
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	protein TIC 40, chloroplastic isoform X1
Genome location	tig00153016:1053931..1067156
RNA-Seq Expression	Sgr016960
Synteny	Sgr016960
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004148914.1 protein TIC 40, chloroplastic [Cucumis sativus]

5.7e-77

84.82

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQNS  SNPT  S SPFPIPP+F  GTT+SPSVSEPA SIDVTATKVE+EPVTNVK+ TEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++KSPFK  EDATD   SKSAQ T+ELPQNGAASKQA+NGS+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

XP_008463124.1 PREDICTED: protein TIC 40, chloroplastic isoform X1 [Cucumis melo]

1.3e-76

85.34

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQNS  SNP   S SPFPIPP+F  GTTV+PSVSEPAASIDVTATKVE+EPVTNVK GTEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++KSPFK  EDATD   SKSAQ TEELPQNGAASKQA+ GS+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

XP_022141408.1 protein TIC 40, chloroplastic isoform X1 [Momordica charantia]

9.7e-77

83.77

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LFSWVASYLKKYAMQQAFKTMM+QMNSQNS  SNP   S   FPIP +FG GTT  PSVSEP ASIDVTATKVEDEPV+NV NG E KE+ KFAFVD+S
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        P+ETN+KSPF+SNED TDTSFSKSAQLTEELPQNGAASKQAF GSEG QF++KPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

XP_038877065.1 protein TIC 40, chloroplastic isoform X1 [Benincasa hispida]

2.0e-77

85.86

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQNS  SNPT  S SPFP+PP+F  GTTVSPSVSEPAASIDVT TKVE+EPV NVK+GTEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++ SPFK  EDATD   SKSAQ TEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

XP_038877066.1 protein TIC 40, chloroplastic isoform X2 [Benincasa hispida]

5.9e-74

84.29

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQNS  SNPT  S SPFP+PP+F  GTTVSPSVSEPAASIDVT TKVE+EPV NVK+GTEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++ SPFK  EDATD   SKSAQ TEE   NGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIG9 protein TIC 40, chloroplastic isoform X1

6.1e-77

85.34

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQNS  SNP   S SPFPIPP+F  GTTV+PSVSEPAASIDVTATKVE+EPVTNVK GTEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++KSPFK  EDATD   SKSAQ TEELPQNGAASKQA+ GS+GSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

A0A6J1CIJ9 protein TIC 40, chloroplastic isoform X2

1.8e-73

82.2

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LFSWVASYLKKYAMQQAFKTMM+QMNSQNS  SNP   S   FPIP +FG GTT  PSVSEP ASIDVTATKVEDEPV+NV NG E KE+ KFAFVD+S
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        P+ETN+KSPF+SNED TDTSFSKSAQLTEE   NGAASKQAF GSEG QF++KPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

A0A6J1CKF2 protein TIC 40, chloroplastic isoform X1

4.7e-77

83.77

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LFSWVASYLKKYAMQQAFKTMM+QMNSQNS  SNP   S   FPIP +FG GTT  PSVSEP ASIDVTATKVEDEPV+NV NG E KE+ KFAFVD+S
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        P+ETN+KSPF+SNED TDTSFSKSAQLTEELPQNGAASKQAF GSEG QF++KPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

A0A6J1FIY5 protein TIC 40, chloroplastic-like isoform X1

4.9e-74

82.72

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQN+Q SN T P  SPF +PP+F  GT VSPSVSE AASIDVTATKVEDEPVTNVK  TEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++KSPFK  E+ATDT  SKSAQ + E PQNGAASKQAFNGSEGSQFSRKPG  LSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

A0A6J1K0V5 protein TIC 40, chloroplastic-like isoform X1

4.9e-74

82.72

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS
        +LF+WVASYLKKYAMQQAFKTMM+QMNSQN+  SN T P  SPFP+PP+F  GT VSPSVSE AASIDVTATKVEDEPVTNVK+ TEN EA KFAFVDVS
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDEPVTNVKNGTENKEANKFAFVDVS

Query:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
        PEET++KSPFK  E+ATDT  SKSAQL  E PQNGAASKQAFNGSEGSQFSRK G  LSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK
Subjt:  PEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFK

SwissProt top hits

e value

%identity

Alignment

Q8GT66 Protein TIC 40, chloroplastic

7.3e-35

50.48

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSAS--PFPIPPSFGPGT-----------TVSPSVSEPAASIDVTATKVE---DEPVTNVKN
        +LFS VAS +KKYAMQQAFK+MM QMN+QN+ F +    S    PFP+P + GP T           T + S S+   ++D+ ATKVE     P  NVK 
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSAS--PFPIPPSFGPGT-----------TVSPSVSEPAASIDVTATKVE---DEPVTNVKN

Query:  GTENK-EANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEE
          E K E  K AFVDVSPEET +K+ F+  +D  ++S  K A+   E  QNG   KQ F  S  S   RK  S LSV+A+EKMMEDPTVQ+M+YP+LPEE
Subjt:  GTENK-EANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEE

Query:  MRNPETFK
        MRNP TFK
Subjt:  MRNPETFK

Q9FMD5 Protein TIC 40, chloroplastic

5.4e-38

49.77

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSAS--PFPIPPSFGPGTTVSPSVSEPA-ASIDVTATKVE-----------------DEPVT
        +LFS+V S LKKYAMQ A KTMM QMN+QNSQF+N   PS S  PFP PP   P ++   S S+ + A++DVTATKVE                 D+P  
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSAS--PFPIPPSFGPGTTVSPSVSEPA-ASIDVTATKVE-----------------DEPVT

Query:  NVKNGTENKEANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQF--SRKPGSVLSVEAVEKMMEDPTVQKMIYP
         ++   E KE   +AF D+SPEET ++SPF +  + ++T+  K  +L E++ QNGA        SE  Q     K G  LSVEA+EKMMEDPTVQKM+YP
Subjt:  NVKNGTENKEANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQF--SRKPGSVLSVEAVEKMMEDPTVQKMIYP

Query:  HLPEEMRNPETFK
        +LPEEMRNPETFK
Subjt:  HLPEEMRNPETFK

Arabidopsis top hits

e value

%identity

Alignment

AT5G16620.1 hydroxyproline-rich glycoprotein family protein

3.8e-39

49.77

Show/hide

Query:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSAS--PFPIPPSFGPGTTVSPSVSEPA-ASIDVTATKVE-----------------DEPVT
        +LFS+V S LKKYAMQ A KTMM QMN+QNSQF+N   PS S  PFP PP   P ++   S S+ + A++DVTATKVE                 D+P  
Subjt:  SLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSAS--PFPIPPSFGPGTTVSPSVSEPA-ASIDVTATKVE-----------------DEPVT

Query:  NVKNGTENKEANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQF--SRKPGSVLSVEAVEKMMEDPTVQKMIYP
         ++   E KE   +AF D+SPEET ++SPF +  + ++T+  K  +L E++ QNGA        SE  Q     K G  LSVEA+EKMMEDPTVQKM+YP
Subjt:  NVKNGTENKEANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQF--SRKPGSVLSVEAVEKMMEDPTVQKMIYP

Query:  HLPEEMRNPETFK
        +LPEEMRNPETFK
Subjt:  HLPEEMRNPETFK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TGGCTGAACGGTTTGCAAGTATTTCTTCTTCGACAACCAGCAATGAATCATCTTCTGTCGGTGTTCCACCATTATCAGTTCCTCCCCCCTCCTCATATGTCATTATTTTC
ATGGGTGGCTTCTTACTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGACTCAAATGAATTCTCAAAACAGCCAGTTTAGTAATCCTACGCCACCTTCTG
CATCACCTTTTCCAATACCTCCATCATTTGGGCCTGGCACGACAGTTTCCCCATCTGTTTCTGAACCTGCTGCTTCAATTGATGTAACTGCTACAAAAGTTGAAGATGAA
CCAGTTACTAATGTCAAAAATGGGACAGAGAACAAGGAGGCAAATAAGTTTGCTTTTGTAGATGTCTCTCCTGAAGAAACTAACGAAAAGAGTCCATTCAAAAGCAACGA
AGATGCCACAGACACAAGTTTTTCGAAGAGTGCTCAGCTTACTGAGGAACTTCCACAGAATGGAGCTGCTTCTAAGCAGGCTTTTAATGGTTCAGAGGGATCCCAGTTCA
GCCGAAAACCTGGCTCGGTCTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCGACAGTGCAGAAGATGATATATCCCCATTTGCCTGAGGAGATGAGAAATCCA
GAAACATTCAAGTCTAATCTAGTGGCAAAACGTCAGATGACCTATTCCTCCAGTAGATGGGTGAGGGTAGTTGATATCCCACCCCATCTAGGAAGATCGGATGTGCTCAT
GAAGCTTGTGAATCTTTTTGGCTCTCTGATCCAATTTGATTACGTTGATGGTCTGGATAATTTTATGGGGTATACAAAGGCAAGGGAGTGCATTGAAGGTTCAAATTTCG
ATCTTGAAGTTGCTGGACGGAGGCTAGAGCTCGAAGGAAAGGTGACGCTAATGTGGTTACTTTTGAAATTTTCAAATCATCTAGTGGAGCCTGTATGTCAGAAGGTTCAG
CACCTAACTCAGAAGGGGTTGGCCATTGCTCCATTAAGTAATGCTAGCAGGCCTACTTTTGTTCAAAGTTGGTTGTTTACTTCTCTTGCCGATGAGTTGAGCCTTGTGTT
GGAGTCATCAAAACATTACAACATCTATGCCAAACAATCCAACCTTGTTCCAACTGCTTCAAATGTGATTCCTAATAGTGGTGGGGACATTCTTGAGGATAGGGGTGTGT
TGGATTTGTCTCTTGATCCCTCTATGACATGCTTGTTTGATGATGCCTCCTTCCTCTTGTTTCCAATTCTTCCGGACATAGCACAATTGACCTTGAAGGGGTTTTCAATC
AAGCATAAGAGCTTGTTACTCTCAATTAATCGATTCTTTGATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

WLNGLQVFLLRQPAMNHLLSVFHHYQFLPPPHMSLFSWVASYLKKYAMQQAFKTMMTQMNSQNSQFSNPTPPSASPFPIPPSFGPGTTVSPSVSEPAASIDVTATKVEDE
PVTNVKNGTENKEANKFAFVDVSPEETNEKSPFKSNEDATDTSFSKSAQLTEELPQNGAASKQAFNGSEGSQFSRKPGSVLSVEAVEKMMEDPTVQKMIYPHLPEEMRNP
ETFKSNLVAKRQMTYSSSRWVRVVDIPPHLGRSDVLMKLVNLFGSLIQFDYVDGLDNFMGYTKARECIEGSNFDLEVAGRRLELEGKVTLMWLLLKFSNHLVEPVCQKVQ
HLTQKGLAIAPLSNASRPTFVQSWLFTSLADELSLVLESSKHYNIYAKQSNLVPTASNVIPNSGGDILEDRGVLDLSLDPSMTCLFDDASFLLFPILPDIAQLTLKGFSI
KHKSLLLSINRFFD

Sgr016960 (gene) of Monk fruit (Qingpiguo) v1 genome