CuGenDBv2

Gene ID	Sgr017054
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Dynein light chain
Genome location	tig00153017:1169625..1170513
RNA-Seq Expression	Sgr017054
Synteny	Sgr017054
Gene Ontology terms	GO:0007017 - microtubule-based process (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005874 - microtubule (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0030286 - dynein complex (cellular component) GO:0045505 - dynein intermediate chain binding (molecular function) GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domains	IPR001372 - Dynein light chain, type 1/2 IPR037177 - Dynein light chain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0046340.1 dynein light chain 1 [Cucumis melo var. makuwa]

8.9e-30

80.95

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKKYSFVCISF-SDFWLVKV-FGDGY
        M+ AEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQ+RAFSCARELLDSMPGKLDSKRLALALKK    C  F  DF LVKV F  GY
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKKYSFVCISF-SDFWLVKV-FGDGY

Query:  WTVLT
         T L+
Subjt:  WTVLT

XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]

6.4e-28

93.51

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        M+ AEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQ+RAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

XP_022146325.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]

2.2e-28

92.21

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        ME AEMELERRSKFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQ+RAFSCARELLDSMPGKLDSKR ALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]

4.9e-28

93.51

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        ME AEMELERRSKFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQ+RAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]

2.9e-28

93.51

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        M+ AEMELERRSKFL+GLILKKKA EQQEQRDRLNVRVRASDMPFPLQ+RAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPF8 Dynein light chain

3.1e-28

93.51

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        M+ AEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQ+RAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

A0A1S3CSY6 Dynein light chain

3.1e-28

93.51

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        M+ AEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQ+RAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

A0A5A7TT68 Dynein light chain

4.3e-30

80.95

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKKYSFVCISF-SDFWLVKV-FGDGY
        M+ AEMELERRSKFLNGLILKKKA EQQEQRDRLNVRVRASDM FPLQ+RAFSCARELLDSMPGKLDSKRLALALKK    C  F  DF LVKV F  GY
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKKYSFVCISF-SDFWLVKV-FGDGY

Query:  WTVLT
         T L+
Subjt:  WTVLT

A0A6J1CWZ8 Dynein light chain

1.1e-28

92.21

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        ME AEMELERRSKFLNGLI KKKAVEQQE+RDRLN+RVRASDMPFPLQ+RAFSCARELLDSMPGKLDSKR ALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

A0A6J1FHG9 Dynein light chain

5.3e-28

92.21

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        ME AEMELERR+KFLNGLILKKKA E QE RDRLNVRVRASDMPFPLQ+RAFSCARELLDSMPGKLDSKRLALALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G23220.1 Dynein light chain type 1 family protein

6.6e-23

71.43

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Query:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        ME  E+ELERRSKFLN LI KKKA EQQ+Q+D  NVRVRASDMP P Q+RAFS +RE+L++ PGK D+KRLA ALKK
Subjt:  MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

AT5G20110.1 Dynein light chain type 1 family protein

6.8e-04

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Query:  DRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK
        + L VR+ A+DMP  +Q+ AF CAR  LDS+  K  SK +A  LKK
Subjt:  DRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKK

Sequences

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CDS sequence

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ATGGAGGAAGCGGAGATGGAGCTGGAGCGGCGGAGCAAGTTTCTCAACGGGCTTATCTTGAAGAAGAAAGCGGTGGAGCAGCAAGAGCAGCGCGATCGTCTCAACGTTCG
CGTCAGGGCCTCCGACATGCCGTTTCCTCTGCAGAGTCGCGCTTTTAGCTGCGCTCGTGAACTGCTCGACTCGATGCCCGGCAAGCTCGATAGCAAACGCCTCGCTCTCG
CCCTTAAAAAGTACAGCTTCGTCTGCATTTCCTTTTCAGATTTTTGGTTAGTGAAAGTTTTTGGGGATGGTTATTGGACTGTTTTGACTAGAGAGTCTTCTATAGACTTG
TACTTCTGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGATGGGTTGCCATGGAAGATGTGGACATGGCAATTCCAGTGGGCATTTGCTGCCCGCCATTAATACCAT
AGAGCTAGGAGCTCTAACTTGTGATAGCTGA

mRNA sequence

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Protein sequence

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MEEAEMELERRSKFLNGLILKKKAVEQQEQRDRLNVRVRASDMPFPLQSRAFSCARELLDSMPGKLDSKRLALALKKYSFVCISFSDFWLVKVFGDGYWTVLTRESSIDL
YFCGERERERERERMGCHGRCGHGNSSGHLLPAINTIELGALTCDS

Sgr017054 (gene) of Monk fruit (Qingpiguo) v1 genome