CuGenDBv2

Gene ID	Sgr017075
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	rRNA 2'-O-methyltransferase fibrillarin 2
Genome location	tig00153024:758540..759338
RNA-Seq Expression	Sgr017075
Synteny	Sgr017075
Gene Ontology terms	GO:0000494 - box C/D snoRNA 3'-end processing (biological process) GO:1990258 - histone glutamine methylation (biological process) GO:0051321 - meiotic cell cycle (biological process) GO:0051225 - spindle assembly (biological process) GO:0031167 - rRNA methylation (biological process) GO:0031122 - cytoplasmic microtubule organization (biological process) GO:0007020 - microtubule nucleation (biological process) GO:0000278 - mitotic cell cycle (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005874 - microtubule (cellular component) GO:0005730 - nucleolus (cellular component) GO:0000930 - gamma-tubulin complex (cellular component) GO:0031428 - box C/D snoRNP complex (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0000923 - equatorial microtubule organizing center (cellular component) GO:0000922 - spindle pole (cellular component) GO:0008649 - rRNA methyltransferase activity (molecular function) GO:0003723 - RNA binding (molecular function) GO:0043015 - gamma-tubulin binding (molecular function) GO:0051011 - microtubule minus-end binding (molecular function) GO:1990259 - histone-glutamine methyltransferase activity (molecular function)
InterPro domains	IPR000692 - Fibrillarin IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6576706.1 rRNA 2'-O-methyltransferase fibrillarin 2, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-40

82.69

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

XP_022141240.1 mediator of RNA polymerase II transcription subunit 36a-like [Momordica charantia]

1.6e-40

82.69

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

XP_022984980.1 probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima]

2.2e-40

81.73

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

XP_023552409.1 mediator of RNA polymerase II transcription subunit 36a-like [Cucurbita pepo subsp. pepo]

2.2e-40

81.73

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

XP_038875740.1 rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida]

1.6e-40

82.69

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLF9 Uncharacterized protein

1.4e-40

80.77

Show/hide

Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK ++EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

A0A6J1CHH3 mediator of RNA polymerase II transcription subunit 36a-like

8.0e-41

82.69

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK VIEPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

A0A6J1G280 probable mediator of RNA polymerase II transcription subunit 36b

1.4e-40

80.77

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTK+EYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

A0A6J1HX74 probable mediator of RNA polymerase II transcription subunit 36b

1.4e-40

80.77

Show/hide

Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTK+EYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

A0A6J1JA27 probable mediator of RNA polymerase II transcription subunit 36b

1.0e-40

81.73

Show/hide

Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK V+EPHRHEGIFI KGKEDAL+T+N+VSG+SVYNEKRIS  NEDGTKVEYRVWNPFRSKL A +LGGVDDIWI PGARVLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        +VVG
Subjt:  NVVG

SwissProt top hits

e value

%identity

Alignment

P22087 rRNA 2'-O-methyltransferase fibrillarin

5.9e-33

67.71

Show/hide

Query:  VIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDG-TKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG
        ++EPHRHEG+FI +GKEDAL+T+N+V G+SVY EKR+S  +G  K+EYR WNPFRSKL A ILGGVD I I PGA+VLYLGA S TT+SHV ++VG
Subjt:  VIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDG-TKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG

P22232 rRNA 2'-O-methyltransferase fibrillarin

7.0e-34

70.41

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Query:  KDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDG-TKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG
        K ++EPHRHEGIFI +GKEDAL+T+N+V G+SVY EKRIS EDG  K EYR WNPFRSK+ A ILGGVD I I PG +VLYLGA S TT+SHV +VVG
Subjt:  KDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDG-TKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVG

P35551 rRNA 2'-O-methyltransferase fibrillarin

7.4e-36

69.9

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Query:  KGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLN
        KG +K +IEPHRH G+FI +GKED L+T N+V G+SVYNEKRIS  + DGTKVEYRVWNPFRSKL A ILGG+D+I+I PGARVLYLGA + T++SHV +
Subjt:  KGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLN

Query:  VVG
        VVG
Subjt:  VVG

Q94AH9 rRNA 2'-O-methyltransferase fibrillarin 2

6.5e-40

74.04

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTK EYRVWNPFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        ++VG
Subjt:  NVVG

Q9FEF8 rRNA 2'-O-methyltransferase fibrillarin 1

2.2e-40

Show/hide

Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTKVEYRVWNPFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        ++VG
Subjt:  NVVG

Arabidopsis top hits

e value

%identity

Alignment

AT4G25630.1 fibrillarin 2

4.6e-41

74.04

Show/hide

Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTK EYRVWNPFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        ++VG
Subjt:  NVVG

AT5G52470.1 fibrillarin 1

1.6e-41

Show/hide

Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTKVEYRVWNPFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        ++VG
Subjt:  NVVG

AT5G52470.2 fibrillarin 1

1.6e-41

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        MKG SK ++EPHRH G+FI KGKEDAL+T+N+V G++VYNEKRIS  NEDGTKVEYRVWNPFRSKL A ILGGVD+IWI PGA+VLYLGA S TT+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRIS--NEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        ++VG
Subjt:  NVVG

AT5G52490.1 Fibrillarin family protein

1.1e-31

59.62

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Query:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRI--SNEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL
        +KG SK ++ PHRH G+F+ K K DAL+T+N+V G+ +YNEKRI   NED + VEYRVWNP RSKL   I  GVD+IWI PG +VLYLGA+S  T+SHV 
Subjt:  MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRI--SNEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVL

Query:  NVVG
        ++VG
Subjt:  NVVG

Sequences

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CDS sequence

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ATGAAAGGTAGAAGCAAAGATGTCATTGAACCCCACAGACATGAAGGGATTTTCATAGTCAAGGGTAAAGAAGATGCTCTTATCACTGAGAATATAGTCTCTGGTAAATC
TGTCTACAACGAGAAGAGGATATCTAATGAAGATGGAACAAAGGTTGAATACAGAGTTTGGAACCCATTCAGGTCAAAGTTGACTGCTGTTATTCTTGGTGGTGTTGATG
ACATATGGATTAACCCTGGTGCTCGAGTGTTGTATCTTGGTGCTACTTCAGAAACAACTATATCTCATGTCTTAAATGTTGTTGGCCTT

mRNA sequence

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Protein sequence

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MKGRSKDVIEPHRHEGIFIVKGKEDALITENIVSGKSVYNEKRISNEDGTKVEYRVWNPFRSKLTAVILGGVDDIWINPGARVLYLGATSETTISHVLNVVGL

Sgr017075 (gene) of Monk fruit (Qingpiguo) v1 genome