| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0063818.1 RNA polymerase sigma factor sigF [Cucumis melo var. makuwa] | 1.3e-225 | 79.42 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
SS EK+ N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E
Subjt: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
Query: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
KTSE FDPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVH
Subjt: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
Query: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
IAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGI
Subjt: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
Query: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
TVERLDKL+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQ
Subjt: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGA
LENRALYKLKRCCNSQGLGA
Subjt: LENRALYKLKRCCNSQGLGA
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| XP_016902883.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Cucumis melo] | 1.3e-225 | 79.42 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
SS EK+ N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E
Subjt: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
Query: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
KTSE FDPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVH
Subjt: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
Query: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
IAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGI
Subjt: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
Query: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
TVERLDKL+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQ
Subjt: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGA
LENRALYKLKRCCNSQGLGA
Subjt: LENRALYKLKRCCNSQGLGA
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| XP_016902885.1 PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Cucumis melo] | 1.3e-225 | 79.42 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
SS EK+ N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E
Subjt: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
Query: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
KTSE FDPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVH
Subjt: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
Query: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
IAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGI
Subjt: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
Query: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
TVERLDKL+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQ
Subjt: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGA
LENRALYKLKRCCNSQGLGA
Subjt: LENRALYKLKRCCNSQGLGA
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| XP_022143971.1 RNA polymerase sigma factor sigF, chloroplastic [Momordica charantia] | 1.3e-238 | 83.02 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + M H+QATPARYFSTSF+PQEQHHE RPQSQILKDDKTSQMTLDRRLIER VSIDEG++ GHDHLVWELKHQ EWPGL+SSWPS QMGEYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTG-REMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYT-------------------------------------
SSVEKQPNNT RE+LVEDEPE++IA AKKALSASKQAASLVEESELVGTN+DSSS + +
Subjt: SSVEKQPNNTG-REMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYT-------------------------------------
Query: -----EKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLR
KT+ENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILE+VKARLQSQFG EPTLVEWAEA+G+TCQ LQSQLH R REKLINANLR
Subjt: -----EKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLR
Query: MVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAA
MVVHIAK+YQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFF+R GNYKPSKEELAA
Subjt: MVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAA
Query: HVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKE
HVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLRYGIEDGKEKTLLEIGNMFGLSKE
Subjt: HVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKE
Query: RVRQLENRALYKLKRCCNSQGLGA
RVRQLENRALYKLKRCCNSQGLGA
Subjt: RVRQLENRALYKLKRCCNSQGLGA
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| XP_038882876.1 RNA polymerase sigma factor sigF, chloroplastic [Benincasa hispida] | 4.1e-232 | 82.56 | Show/hide |
Query: SILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKISSVE
S +SMFHEQA PARYFSTSFL QEQHHE RPQSQILKDD+TSQ TLDRRLIER VSIDEGN+S HDHL+WE KHQ VEWPGL+SSWPS QM EYKISSVE
Subjt: SILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKISSVE
Query: KQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE---------------------------------------KT
KQ N G EMLV+DEPEN+IA AKKALSASKQAASLV+ESELVGTNLD +S +++ E KT
Subjt: KQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE---------------------------------------KT
Query: SENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQ
ENFDPNDPLRLFLWGPETKKLLTV+EESELIVQIQDLMIL++VKARLQSQFG EPTLVEWAEALGLTCQRLQSQL S R REKLINANLRMVVHIAKQ
Subjt: SENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQ
Query: YQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVER
YQGRGLSL DLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKN+F+RAGNYKPSKEELAA VGITVER
Subjt: YQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVER
Query: LDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENR
LDKLLFMSRIPRSLQQPVW DQDTTFQEITADSE+DTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQLENR
Subjt: LDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENR
Query: ALYKLKRCCNSQGLGA
ALYKLKRC NSQGLGA
Subjt: ALYKLKRCCNSQGLGA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E3S8 RNA polymerase sigma factor sigF, chloroplastic isoform X1 | 6.1e-226 | 79.42 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
SS EK+ N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E
Subjt: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
Query: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
KTSE FDPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVH
Subjt: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
Query: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
IAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGI
Subjt: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
Query: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
TVERLDKL+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQ
Subjt: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGA
LENRALYKLKRCCNSQGLGA
Subjt: LENRALYKLKRCCNSQGLGA
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| A0A1S4E4I4 RNA polymerase sigma factor sigF, chloroplastic isoform X2 | 6.1e-226 | 79.42 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
SS EK+ N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E
Subjt: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
Query: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
KTSE FDPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVH
Subjt: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
Query: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
IAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGI
Subjt: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
Query: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
TVERLDKL+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQ
Subjt: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGA
LENRALYKLKRCCNSQGLGA
Subjt: LENRALYKLKRCCNSQGLGA
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| A0A5A7V893 RNA polymerase sigma factor sigF | 6.1e-226 | 79.42 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
SS EK+ N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E
Subjt: SSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE-------------------------------------
Query: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
KTSE FDPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVH
Subjt: --KTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVH
Query: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
IAKQY GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGI
Subjt: IAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGI
Query: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
TVERLDKL+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQ
Subjt: TVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGA
LENRALYKLKRCCNSQGLGA
Subjt: LENRALYKLKRCCNSQGLGA
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| A0A5D3CAF4 RNA polymerase sigma factor | 1.4e-225 | 80.27 | Show/hide |
Query: MFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKISSVEKQPN
MF EQA+PARYFSTSFL QEQHHE RPQSQILKDD+TSQMTLDRRLIER V IDEG++S HDHL+WELKHQ VEWP L+SSWPS QM EYKISS EK+
Subjt: MFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKISSVEKQPN
Query: NTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE---------------------------------------KTSENF
N EMLV+DEPEN+IA AKKALSASKQAA LV+ESELVGT+LD SS +++ E KTSE F
Subjt: NTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYTE---------------------------------------KTSENF
Query: DPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGR
DPNDPLRLFLWGPETKKLLT QEES+LIVQIQDLMIL++VKA+LQSQFG EPTLVEWAEALG+TCQ+LQSQLHS R REKLINANLRMVVHIAKQY GR
Subjt: DPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGR
Query: GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKL
GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFA+YAYWWIR SI KAIF+HSRTIRLPENVY LLGKVTEAKN+ +RAGNYKPSKEELAAHVGITVERLDKL
Subjt: GLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKL
Query: LFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
+FMSRIPRSLQQPVWADQDTT+QEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLR+GIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
Subjt: LFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYK
Query: LKRCCNSQGLGA
LKRCCNSQGLGA
Subjt: LKRCCNSQGLGA
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| A0A6J1CRW8 RNA polymerase sigma factor sigF, chloroplastic | 6.3e-239 | 83.02 | Show/hide |
Query: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
S P + M H+QATPARYFSTSF+PQEQHHE RPQSQILKDDKTSQMTLDRRLIER VSIDEG++ GHDHLVWELKHQ EWPGL+SSWPS QMGEYKI
Subjt: SYIPSILSMFHEQATPARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELKHQVVEWPGLISSWPSSQMGEYKI
Query: SSVEKQPNNTG-REMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYT-------------------------------------
SSVEKQPNNT RE+LVEDEPE++IA AKKALSASKQAASLVEESELVGTN+DSSS + +
Subjt: SSVEKQPNNTG-REMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDSSSEEEARYT-------------------------------------
Query: -----EKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLR
KT+ENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILE+VKARLQSQFG EPTLVEWAEA+G+TCQ LQSQLH R REKLINANLR
Subjt: -----EKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLR
Query: MVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAA
MVVHIAK+YQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFF+R GNYKPSKEELAA
Subjt: MVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAA
Query: HVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKE
HVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILS KERRIIRLRYGIEDGKEKTLLEIGNMFGLSKE
Subjt: HVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKE
Query: RVRQLENRALYKLKRCCNSQGLGA
RVRQLENRALYKLKRCCNSQGLGA
Subjt: RVRQLENRALYKLKRCCNSQGLGA
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 4.9e-63 | 35.43 | Show/hide |
Query: LKHQVVEWPGLIS-SWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDS-SSEEEARYTEKTSENFDPND
L H V G++S +S + I +E + L+E++P ++ A ++ +++ A + E + + S + + ++ D ND
Subjt: LKHQVVEWPGLIS-SWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDS-SSEEEARYTEKTSENFDPND
Query: PLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSL
PLR + KLLTV+EE EL IQDL+ LE ++ L + G +PT +WA A G+ + L+ ++H ++K+I +N+R+V+ IAK YQG G++L
Subjt: PLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSL
Query: HDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMS
DL+QEG GL++ EKF G +F+TYA+WWI+Q++RK++ + SR IRLP ++ +V EA+ P EE+A G++++RL +L
Subjt: HDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMS
Query: RIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
+ PRSL Q + +Q+ E+ AD E T + + +E MR+ + +L L T+E+++IR R+G+EDG+ KTL EIG M G+S+ERVRQ+E+ A KLK
Subjt: RIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
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| P26683 RNA polymerase sigma factor SigA | 2.7e-61 | 38.87 | Show/hide |
Query: SSSEEEARYTEKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLI
S ++R ++ + D +RL+L +LL EE EL +I DL+ LE V+ RL + +P EWAEA+ L + +LH R ++K++
Subjt: SSSEEEARYTEKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLI
Query: NANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSK
+NLR+VV IAK+Y RGLS DL+QEGSLGL+++ EKF + G +F+TYA WWIRQ+I +AI + SRTIRLP ++Y + ++ + + KP++
Subjt: NANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSK
Query: EELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMF
EE+A + +T+E+L + +++P SL+ P+ ++D+ + +S+ +TP+ V + L+R + +L LS +ER ++RLRYG++DG+ KTL EIG +F
Subjt: EELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMF
Query: GLSKERVRQLENRALYKLK
+++ER+RQ+E +AL KL+
Subjt: GLSKERVRQLENRALYKLK
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| P38023 RNA polymerase sigma factor SigA1 | 2.7e-61 | 38.55 | Show/hide |
Query: VEESELVGTNLDSSSEEEARYTEKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQ
+++ + VG + D++++ +A+ + +E D +RL+L +LL EE EL QI DL+ LE ++ L Q P+ EWA A+ + +
Subjt: VEESELVGTNLDSSSEEEARYTEKTSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQ
Query: LHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKN
L R ++K++ +NLR+VV IAK+Y RGLS DL+QEGSLGL+++ EKF + G +F+TYA WWIRQ+I +AI + SRTIRLP ++Y + ++ +
Subjt: LHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKN
Query: FFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQE-ITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIED
+ KP++EE+A + +T+E+L + +++P SL+ P+ ++D+ + I AD E TP+ V + L+R + +LS LS +ER ++RLRYG++D
Subjt: FFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQE-ITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIED
Query: GKEKTLLEIGNMFGLSKERVRQLENRALYKLK
G+ KTL EIG +F +++ER+RQ+E +AL KL+
Subjt: GKEKTLLEIGNMFGLSKERVRQLENRALYKLK
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| Q31ME3 RNA polymerase sigma factor SigA2 | 9.9e-56 | 39.94 | Show/hide |
Query: TSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAK
+S + P D +R +L +LLT +EE Q+Q LM+L D + L+ + GHEP+ EWA A+ L + L Q+ + + K+I ANLR+VV IAK
Subjt: TSENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAK
Query: QYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVE
+YQ R + DL+QEG+LGL + VEKF P G +F+TYAYWWIRQ+I +AI + SRTIRLP ++ L K+ + + + + ELA + + +E
Subjt: QYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVE
Query: RLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLEN
++ + + M+R P SL V QDT QE+ D E +P VE+E +RR +RNL++ L+ +++ +I LRYG+++G +L ++G +S+ERVR+LE
Subjt: RLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLEN
Query: RALYKLKR
+A+ L+R
Subjt: RALYKLKR
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 3.1e-134 | 51.01 | Show/hide |
Query: HLSSTFSVFFLCSYIPSILSMFHEQATP-----------ARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELK
HL S++S PS + M H+Q T +R+F S L QE E RP S L+DD+TSQ+TL+RR + VS E + +L
Subjt: HLSSTFSVFFLCSYIPSILSMFHEQATP-----------ARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELK
Query: HQVVEWPGLISSWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESEL-----VGTNLDSSS-----------------
H W LIS S E K+ +V L + E +++A A+KALSASKQAA LV+++E + +L +SS
Subjt: HQVVEWPGLISSWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESEL-----VGTNLDSSS-----------------
Query: ---------------EEEARYTEKTS------ENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTC
++E +KTS + D +D L+LFLWGPETK+LLT +EE+ELI IQ L+ LE VK +L+SQ G EPT+ EWAEA+G++
Subjt: ---------------EEEARYTEKTS------ENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTC
Query: QRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGK
L+S +H R+ REKLI ANLR+VVHIAKQYQ RGL+ DLLQEGS+GLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK+IF++SRTIRLPENVY LLGK
Subjt: QRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGK
Query: VTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLR
V+EA+ ++ GNY+PSKEELA HVG++ E+LDKLL+ +R P S+QQP+W+DQDTTFQEIT DS ++TP +SV ++LMR H+RNLL++LS KERRII+LR
Subjt: VTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLR
Query: YGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA
+GI+ GK+++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL A
Subjt: YGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 3.5e-64 | 35.43 | Show/hide |
Query: LKHQVVEWPGLIS-SWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDS-SSEEEARYTEKTSENFDPND
L H V G++S +S + I +E + L+E++P ++ A ++ +++ A + E + + S + + ++ D ND
Subjt: LKHQVVEWPGLIS-SWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESELVGTNLDS-SSEEEARYTEKTSENFDPND
Query: PLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSL
PLR + KLLTV+EE EL IQDL+ LE ++ L + G +PT +WA A G+ + L+ ++H ++K+I +N+R+V+ IAK YQG G++L
Subjt: PLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSL
Query: HDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMS
DL+QEG GL++ EKF G +F+TYA+WWI+Q++RK++ + SR IRLP ++ +V EA+ P EE+A G++++RL +L
Subjt: HDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMS
Query: RIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
+ PRSL Q + +Q+ E+ AD E T + + +E MR+ + +L L T+E+++IR R+G+EDG+ KTL EIG M G+S+ERVRQ+E+ A KLK
Subjt: RIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLK
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| AT1G64860.1 sigma factor A | 1.7e-31 | 27.08 | Show/hide |
Query: ISSVEKQ--PNNTGREM---------LVEDEPENIIAFAK------------KALSASKQAASLVEESELVGTNLDSSSEEEARYTEKTSENF-------
++S EK PN T +E+ L+ E I+ K KA+S+ + + ++ S + R K N
Subjt: ISSVEKQ--PNNTGREM---------LVEDEPENIIAFAK------------KALSASKQAASLVEESELVGTNLDSSSEEEARYTEKTSENF-------
Query: --DPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQ
+R ++ G ++ +L+ E L +I+ + L+D K+RL+ + G EP+ + A +L ++ LQ+ L REKL +N+R+V+ IA++Y
Subjt: --DPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQ
Query: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLD
G + DL+Q G +GL++ +EKF G R +TY YWWIRQ + +A+ ++SRT+RLP +++ LG + AK ++ PS + +A + ++ +++
Subjt: GRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLD
Query: KLLFMSRIPRSLQQPVWADQD----TTFQEITADSEVD-TPDVSVERELMRRHIRNLLS-ILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
SL + + + T AD+ ++ P + ++ + L+S L +E+ IIRL YG+ D + T +I GLS+ERVRQ
Subjt: KLLFMSRIPRSLQQPVWADQD----TTFQEITADSEVD-TPDVSVERELMRRHIRNLLS-ILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQ
Query: LENRALYKLKRCCNSQGLGAI
+ AL KLK + + A+
Subjt: LENRALYKLKRCCNSQGLGAI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.2e-135 | 51.01 | Show/hide |
Query: HLSSTFSVFFLCSYIPSILSMFHEQATP-----------ARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELK
HL S++S PS + M H+Q T +R+F S L QE E RP S L+DD+TSQ+TL+RR + VS E + +L
Subjt: HLSSTFSVFFLCSYIPSILSMFHEQATP-----------ARYFSTSFLPQEQHHEYRPQSQILKDDKTSQMTLDRRLIERGVSIDEGNQSGHDHLVWELK
Query: HQVVEWPGLISSWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESEL-----VGTNLDSSS-----------------
H W LIS S E K+ +V L + E +++A A+KALSASKQAA LV+++E + +L +SS
Subjt: HQVVEWPGLISSWPSSQMGEYKISSVEKQPNNTGREMLVEDEPENIIAFAKKALSASKQAASLVEESEL-----VGTNLDSSS-----------------
Query: ---------------EEEARYTEKTS------ENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTC
++E +KTS + D +D L+LFLWGPETK+LLT +EE+ELI IQ L+ LE VK +L+SQ G EPT+ EWAEA+G++
Subjt: ---------------EEEARYTEKTS------ENFDPNDPLRLFLWGPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTC
Query: QRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGK
L+S +H R+ REKLI ANLR+VVHIAKQYQ RGL+ DLLQEGS+GLMKSVEKFKPQ+GCRFATYAYWWIRQSIRK+IF++SRTIRLPENVY LLGK
Subjt: QRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGK
Query: VTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLR
V+EA+ ++ GNY+PSKEELA HVG++ E+LDKLL+ +R P S+QQP+W+DQDTTFQEIT DS ++TP +SV ++LMR H+RNLL++LS KERRII+LR
Subjt: VTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLR
Query: YGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA
+GI+ GK+++L EIG ++GLSKERVRQLE+RALY+LK+ NS GL A
Subjt: YGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGA
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.4e-36 | 28.62 | Show/hide |
Query: QEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEK
+ E+E+ ++ + +E ++ +L+ + G +L WA A G+ + L LH R++L+ + +V+ +A+ Y+G G++ DL+Q G +G+++ E+
Subjt: QEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEGSLGLMKSVEK
Query: FKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYK-PSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDT
F G +F+TY +WIR+S+ + H+R + +P ++ + + +A+ + K + EE+A G +V+++ ++ S+ + V T
Subjt: FKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYK-PSKEELAAHVGITVERLDKLLFMSRIPRSLQQPVWADQDT
Query: TFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGL
F E T D+ +++P+ +V R+ RR I +LL L +E++++ LRYG++D + K+L EIG + +SKE +R++E RA+ KL+ N++ L
Subjt: TFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGL
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| AT5G13730.1 sigma factor 4 | 1.1e-41 | 34.78 | Show/hide |
Query: GPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEG
G L+ EE +L + +++ LE++ ++ +E V A G + L + REK+ R+VV IA YQG+GL+L DL+QEG
Subjt: GPETKKLLTVQEESELIVQIQDLMILEDVKARLQSQFGHEPTLVEWAEALGLTCQRLQSQLHSVRAGREKLINANLRMVVHIAKQYQGRGLSLHDLLQEG
Query: SLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQ
S+GL++ E+F P G + +TY YWWI+Q+I +AI SR ++LP +++ L KV EA N R +PS EE+A H+ + V + + SR P SL
Subjt: SLGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKAIFEHSRTIRLPENVYGLLGKVTEAKNFFIRAGNYKPSKEELAAHVGITVERLDKLLFMSRIPRSLQ
Query: QPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGL
+ + T QEI + P+ V+RE M+ I LL L+ +E R++ L +G+ + EIG LS+ERVRQ+ AL KL+ N L
Subjt: QPVWADQDTTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSTKERRIIRLRYGIEDGKEKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGL
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