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Sgr017193 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr017193
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA-directed RNA polymerase subunit omega
Genome locationtig00153033:391060..391461
RNA-Seq ExpressionSgr017193
SyntenySgr017193
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER48727.1 DNA-directed RNA polymerase subunit omega, partial [Striga asiatica]3.7e-0843.18Show/hide
Query:  LPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEV
        L P +A PG L E   PR PL+RV+ EG+  L AV PPEL  +EL+++RY+SK  +L  G   A G  E      ++ P ++LL  EV
Subjt:  LPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEV

KAB8097195.1 hypothetical protein EE612_025880 [Oryza sativa]4.9e-0543.24Show/hide
Query:  FFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSAS
        FFL  L   LP +IA P RL E   P PP++ ++PE V  L  V+PPEL  ++ Q+L  + K  NL   FH  S
Subjt:  FFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSAS

KAB8116704.1 hypothetical protein EE612_057968, partial [Oryza sativa]1.3e-0539.34Show/hide
Query:  ATAAPNPPAVHRILRKRRFNNFFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWED
        A A   P AV   L         L +L   L  L+A P  L+EA +P PPL+ V PE V Q LAVQP EL  + L+VL  E +  +LG   H      E 
Subjt:  ATAAPNPPAVHRILRKRRFNNFFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWED

Query:  DARPRIQSPWKQLLAAEVTRPE
        +A    + P ++LLAAEV   E
Subjt:  DARPRIQSPWKQLLAAEVTRPE

PON69312.1 hypothetical protein PanWU01x14_090350 [Parasponia andersonii]7.6e-0643.06Show/hide
Query:  MRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP
        M V+P+ V+ LLA++PPEL  +EL++L  + +  +L         RWED A  R+Q P +QLLAAE+ R +P
Subjt:  MRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP

POO01680.1 hypothetical protein TorRG33x02_024570, partial [Trema orientale]2.6e-1450Show/hide
Query:  PPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP
        PPL+ EP RLYEA  PRPPLM V+P+ V+ LLAV+PPEL  +EL++L  + +  +L         R ED A  R+Q P +QLLAAE+ R +P
Subjt:  PPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP

TrEMBL top hitse value%identityAlignment
A0A0P0WFK4 Os04g0643550 protein2.4e-0543.24Show/hide
Query:  FFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSAS
        FFL  L   LP +IA P RL E   P PP++ ++PE V  L  V+PPEL  ++ Q+L  + K  NL   FH  S
Subjt:  FFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSAS

A0A0P0Y7C7 Os12g0163050 protein (Fragment)6.3e-0639.34Show/hide
Query:  ATAAPNPPAVHRILRKRRFNNFFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWED
        A A   P AV   L         L +L   L  L+A P  L+EA +P PPL+ V PE V Q LAVQP EL  + L+VL  E +  +LG   H      E 
Subjt:  ATAAPNPPAVHRILRKRRFNNFFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWED

Query:  DARPRIQSPWKQLLAAEVTRPE
        +A    + P ++LLAAEV   E
Subjt:  DARPRIQSPWKQLLAAEVTRPE

A0A2P5D7P0 Uncharacterized protein3.7e-0643.06Show/hide
Query:  MRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP
        M V+P+ V+ LLA++PPEL  +EL++L  + +  +L         RWED A  R+Q P +QLLAAE+ R +P
Subjt:  MRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP

A0A2P5FV57 Uncharacterized protein (Fragment)1.3e-1450Show/hide
Query:  PPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP
        PPL+ EP RLYEA  PRPPLM V+P+ V+ LLAV+PPEL  +EL++L  + +  +L         R ED A  R+Q P +QLLAAE+ R +P
Subjt:  PPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEVTRPEP

A0A5A7QWG3 DNA-directed RNA polymerase subunit omega (Fragment)1.8e-0843.18Show/hide
Query:  LPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEV
        L P +A PG L E   PR PL+RV+ EG+  L AV PPEL  +EL+++RY+SK  +L  G   A G  E      ++ P ++LL  EV
Subjt:  LPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDDARPRIQSPWKQLLAAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTTCATCATCTCACCAATATTGCAACGGCTGCTCCCAACCCTCCTGCAGTTCACCGCATACTTCGTAAACGACGCTTTAATAATTTCTTTCTTCTTCAACTCAG
ACGCTTCCTTCCGCCTCTTATAGCTGAACCAGGCCGCCTGTATGAAGCATGCAGCCCACGTCCGCCATTGATGCGAGTGAAACCTGAAGGTGTATCTCAGTTGCTTGCTG
TGCAGCCTCCGGAACTGCGCTGCAACGAACTTCAAGTCCTCCGCTATGAGAGCAAAAGCTTCAACCTCGGTTATGGCTTTCACAGTGCGAGTGGAAGATGGGAGGACGAC
GCCAGGCCGAGGATCCAGAGCCCATGGAAGCAACTCCTCGCCGCAGAAGTCACTCGGCCCGAGCCGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGTTCATCATCTCACCAATATTGCAACGGCTGCTCCCAACCCTCCTGCAGTTCACCGCATACTTCGTAAACGACGCTTTAATAATTTCTTTCTTCTTCAACTCAG
ACGCTTCCTTCCGCCTCTTATAGCTGAACCAGGCCGCCTGTATGAAGCATGCAGCCCACGTCCGCCATTGATGCGAGTGAAACCTGAAGGTGTATCTCAGTTGCTTGCTG
TGCAGCCTCCGGAACTGCGCTGCAACGAACTTCAAGTCCTCCGCTATGAGAGCAAAAGCTTCAACCTCGGTTATGGCTTTCACAGTGCGAGTGGAAGATGGGAGGACGAC
GCCAGGCCGAGGATCCAGAGCCCATGGAAGCAACTCCTCGCCGCAGAAGTCACTCGGCCCGAGCCGACTTGA
Protein sequenceShow/hide protein sequence
MNVHHLTNIATAAPNPPAVHRILRKRRFNNFFLLQLRRFLPPLIAEPGRLYEACSPRPPLMRVKPEGVSQLLAVQPPELRCNELQVLRYESKSFNLGYGFHSASGRWEDD
ARPRIQSPWKQLLAAEVTRPEPT