CuGenDBv2

Gene ID	Sgr017209
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Mediator of RNA polymerase II transcription subunit 4
Genome location	tig00153033:583868..587119
RNA-Seq Expression	Sgr017209
Synteny	Sgr017209
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019258 - Mediator complex, subunit Med4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142109.1 mediator of RNA polymerase II transcription subunit 4 [Cucumis sativus]

1.5e-186

90.15

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPSI NPTPPKLPP+QQSH Q+QSNLSS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQS S ST 
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KT+ D EN+ LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPK  ES EKTIE M EPPAP+  DANP   LAAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RV+EPQLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

XP_008449288.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis melo]

2.4e-189

90.4

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPSI NPTPPKLPP+QQSH Q+QSN+SS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQS S ST 
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKT+   EN+ LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPK  ES EKTIE M EPPAP+  DANPL+N+AAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RV+EPQLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

XP_022143910.1 mediator of RNA polymerase II transcription subunit 4 [Momordica charantia]

1.3e-198

94.21

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GL NPNSPSI NPTPPKLPP+QQSH Q+Q NLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFL SQTQS S STP
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY+RP+RVKTKDDVEND LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPK  ES EKTIE M EPPAP+PTDANPLANLAAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEP-QLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPVPLPPLDSLPVPRV+EP QLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEP-QLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

XP_023518528.1 mediator of RNA polymerase II transcription subunit 4 [Cucurbita pepo subsp. pepo]

4.3e-186

89.92

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPSI NPTPPKLPP+QQSH Q+QSNLSSPTPSSTLLPLLPPLPRAQALLLQMA+LASKLFEV PNR+LWLTAFRGSLPTFL SQTQS + STP
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLC-STTV
        LD TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANKLKDAEQVLDVLFDDYADYQ  +RVKT DDVEN+ LC STTV
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLC-STTV

Query:  ASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLP
        ASQLKLSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLY+FADLDVGLPK  ES EKTIE M EPPAP+PTDANPLA LA IQGLLP
Subjt:  ASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLP

Query:  PNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        PNITVPSGWKPGMPVELP DLPMPPPGWKPGDPVPLPPLDSLPV RV+EPQLR NALPGLH+P EPIQVR VQLDILDQDDDSSDY S+EGSSEDDD
Subjt:  PNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

XP_038882754.1 mediator of RNA polymerase II transcription subunit 4 [Benincasa hispida]

3.6e-193

91.16

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Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GL NPNSPSI NPTPPKLPP+QQSH Q+Q N+SSPTPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQS S ST 
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVK KDD EN+ LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LD+GLPK  ES EKTIE M EPPAP+PTDANPL+N+A+IQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPVPLPP+DSLPV RV+EPQLRPNA PGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXB7 Mediator of RNA polymerase II transcription subunit 4

7.2e-187

90.15

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPSI NPTPPKLPP+QQSH Q+QSNLSS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQS S ST 
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KT+ D EN+ LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPK  ES EKTIE M EPPAP+  DANP   LAAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RV+EPQLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

A0A1S3BLP6 Mediator of RNA polymerase II transcription subunit 4

1.2e-189

90.4

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPSI NPTPPKLPP+QQSH Q+QSN+SS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQS S ST 
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKT+   EN+ LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPK  ES EKTIE M EPPAP+  DANPL+N+AAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RV+EPQLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

A0A5A7TZC1 Mediator of RNA polymerase II transcription subunit 4

1.2e-189

90.4

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPSI NPTPPKLPP+QQSH Q+QSN+SS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQS S ST 
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKT+   EN+ LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPK  ES EKTIE M EPPAP+  DANPL+N+AAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RV+EPQLRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

A0A6J1CQ51 Mediator of RNA polymerase II transcription subunit 4

6.3e-199

94.21

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GL NPNSPSI NPTPPKLPP+QQSH Q+Q NLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFL SQTQS S STP
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA
        LD TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY+RP+RVKTKDDVEND LCSTTVA
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCSTTVA

Query:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP
        SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPK  ES EKTIE M EPPAP+PTDANPLANLAAIQGLLPP
Subjt:  SQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLPP

Query:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEP-QLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        NITVPSGWKPGMPVELP DLPMPPPGWKPGDPVPLPPLDSLPVPRV+EP QLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
Subjt:  NITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEP-QLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

A0A6J1I9F9 Mediator of RNA polymerase II transcription subunit 4

3.0e-185

89.42

Show/hide

Query:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP
        +GLTNPNSPS  NPTPPKLPP+QQSH Q+QSNLSSPTPSSTLLPLLPPLPRAQALLLQMA+LASKLFEV PNR+LWLTAFRGSLPTFL SQTQS + STP
Subjt:  IGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTP

Query:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCS-TTV
        LD TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANKLKDAEQVLDVLFDDYADYQ  +RVKT DDVEN+ LCS TTV
Subjt:  LDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTKDDVENDYLCS-TTV

Query:  ASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLP
        ASQLKLSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLY+FADLDVGLPK  ES EKTIE M E PAP+PTDANPLA LA IQGLLP
Subjt:  ASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEPPAPLPTDANPLANLAAIQGLLP

Query:  PNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD
        PNITVPSGWKPGMPVELP DLPMPPPGWKPGDPVPLPPLDSLPV RV+EPQLR NALPGLH+P EPIQVR VQLDILDQDDDSSDY S+EGSSEDDD
Subjt:  PNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTSDEGSSEDDD

SwissProt top hits

e value

%identity

Alignment

Q54D00 Putative mediator of RNA polymerase II transcription subunit 4

3.0e-04

29.25

Show/hide

Query:  SLPTFLTSQTQS-NSASTPLD--GTPSTSKEILSLFNVL--QTQLFE-AVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYAD
        SL T  T  +Q       P+D     +T   +L L N L    ++++  + +L++   +Q    +I  EI  KD  +   A  LKD E  L+       D
Subjt:  SLPTFLTSQTQS-NSASTPLD--GTPSTSKEILSLFNVL--QTQLFE-AVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYAD

Query:  YQRPRRVKTKDDVENDYL-----------CSTTVASQLKLSDILSYAHRISYTTFAPPEFG-AGQAPLRGAL-PPAPQEEQMRASQL-----------YN
                  D + N+ L               V  ++   D++SYAH+IS TT AP  FG    APL     PPAPQ+E MR+S L           Y 
Subjt:  YQRPRRVKTKDDVENDYL-----------CSTTVASQLKLSDILSYAHRISYTTFAPPEFG-AGQAPLRGAL-PPAPQEEQMRASQL-----------YN

Query:  FADLDVGLPKVA
         A++DV  P +A
Subjt:  FADLDVGLPKVA

Q9LZ00 Mediator of RNA polymerase II transcription subunit 4

9.5e-128

62.97

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Query:  IGLTNPNSPSIPNPTPPK------LPPTQQSHQQHQ----------------SNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLT
        +GLT P SPS+ NPTP +         +Q  HQQ Q                ++ S+   SS LL LLPPLPRAQALL QMA L SKLF+VSPNR++WL+
Subjt:  IGLTNPNSPSIPNPTPPK------LPPTQQSHQQHQ----------------SNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLT

Query:  AFRGSLPTFLTSQTQSNSASTPLDG-TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY
        AFRGSLP+FL+S   S     PL+  +PS++KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANKLKDAE+VLD+L DDY+DY
Subjt:  AFRGSLPTFLTSQTQSNSASTPLDG-TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY

Query:  QRPRRVK-TKDDVEND---YLCSTTVASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIEL
        ++P+R K  +DD +ND      STTV+SQLKL DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY FADLD+GLPK  E+ EK +E 
Subjt:  QRPRRVK-TKDDVEND---YLCSTTVASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIEL

Query:  MFEPPAPLPTDANPLANLAAIQGLLPPNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQ-LRPNALPGLHKPPEPIQVRPVQ
        + EPP P         +++AI  LLPPNI VPSGWKPGMPVELP DLP+PPPGWKPGDPV LPPL+S+  PR E+ Q +RP+   GLH+PP+ IQVR VQ
Subjt:  MFEPPAPLPTDANPLANLAAIQGLLPPNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQ-LRPNALPGLHKPPEPIQVRPVQ

Query:  LDILDQDDDSSDYTSDEGSSEDDD
        LDIL +DDDSSDY+SD+ SS+D+D
Subjt:  LDILDQDDDSSDYTSDEGSSEDDD

Arabidopsis top hits

e value

%identity

Alignment

AT5G02850.1 hydroxyproline-rich glycoprotein family protein

6.7e-129

62.97

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Query:  IGLTNPNSPSIPNPTPPK------LPPTQQSHQQHQ----------------SNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLT
        +GLT P SPS+ NPTP +         +Q  HQQ Q                ++ S+   SS LL LLPPLPRAQALL QMA L SKLF+VSPNR++WL+
Subjt:  IGLTNPNSPSIPNPTPPK------LPPTQQSHQQHQ----------------SNLSSPTPSSTLLPLLPPLPRAQALLLQMATLASKLFEVSPNRSLWLT

Query:  AFRGSLPTFLTSQTQSNSASTPLDG-TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY
        AFRGSLP+FL+S   S     PL+  +PS++KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANKLKDAE+VLD+L DDY+DY
Subjt:  AFRGSLPTFLTSQTQSNSASTPLDG-TPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADY

Query:  QRPRRVK-TKDDVEND---YLCSTTVASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIEL
        ++P+R K  +DD +ND      STTV+SQLKL DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY FADLD+GLPK  E+ EK +E 
Subjt:  QRPRRVK-TKDDVEND---YLCSTTVASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIEL

Query:  MFEPPAPLPTDANPLANLAAIQGLLPPNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQ-LRPNALPGLHKPPEPIQVRPVQ
        + EPP P         +++AI  LLPPNI VPSGWKPGMPVELP DLP+PPPGWKPGDPV LPPL+S+  PR E+ Q +RP+   GLH+PP+ IQVR VQ
Subjt:  MFEPPAPLPTDANPLANLAAIQGLLPPNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQ-LRPNALPGLHKPPEPIQVRPVQ

Query:  LDILDQDDDSSDYTSDEGSSEDDD
        LDIL +DDDSSDY+SD+ SS+D+D
Subjt:  LDILDQDDDSSDYTSDEGSSEDDD

Sequences

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CDS sequence

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ATGTGGAAAAAACAGCAGAAGGTTGAAGAAGATGCTGCTGCTGCTGCTGCTGTTTGCAATGAACAATTATTAGCAGATGGGGACCCAGTTGTCAACAATGATACAGTGAT
GAACATGGAGATATGTCTGTTGAAGCTAAACAAAAGTGAAGAAGGCAATATTGGGTTGACGAATCCGAATTCTCCCTCTATTCCAAACCCTACCCCTCCCAAATTGCCTC
CTACTCAACAATCCCACCAGCAACACCAATCCAATCTCTCTTCTCCCACGCCCTCCTCGACCCTTCTCCCTCTCCTTCCACCGCTCCCTAGAGCTCAAGCTCTTCTCCTG
CAAATGGCTACGCTCGCCTCCAAGCTCTTTGAAGTGTCCCCCAATCGTTCCCTCTGGCTCACTGCATTTCGGGGTTCTCTGCCCACTTTTCTTACTTCCCAAACGCAGTC
GAATTCGGCCTCTACGCCTCTTGATGGTACTCCATCTACCTCAAAAGAAATCCTCTCCCTCTTTAATGTTCTGCAAACCCAGCTGTTTGAAGCTGTTGCCGAGCTTCAGG
AAATTCTTGATCTTCAAGACTCTAAGCAGAAGATTGCTTATGAAATTCGGGCCAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAACTCAAAGATGCTGAGCAGGTTCTT
GATGTTCTGTTTGATGATTATGCGGATTATCAACGTCCTCGACGAGTTAAAACAAAGGATGATGTCGAAAATGATTATTTATGTTCGACTACAGTTGCATCCCAGTTGAA
ATTATCTGATATATTGTCGTATGCCCATCGAATAAGCTATACAACTTTTGCACCACCGGAATTTGGTGCTGGACAAGCTCCGCTACGTGGGGCACTTCCCCCTGCCCCAC
AAGAAGAGCAAATGCGTGCCTCTCAGTTGTATAATTTTGCAGACCTTGATGTTGGCTTGCCTAAAGTAGCTGAAAGCAATGAGAAAACTATTGAGCTAATGTTTGAGCCT
CCAGCTCCACTGCCAACAGATGCCAATCCTCTTGCTAATCTGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATCACTGTCCCGTCTGGTTGGAAACCTGGAATGCCAGT
GGAATTACCTACAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCCCCATTGGACTCTCTACCTGTTCCTAGAGTTGAGGAGCCACAAT
TGAGGCCTAATGCTCTTCCAGGATTACATAAACCTCCTGAGCCAATACAAGTTAGGCCTGTTCAATTGGATATTCTTGATCAAGATGATGATAGTAGTGATTACACTAGT
GATGAAGGAAGCTCTGAAGATGATGATTGA

mRNA sequence

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Protein sequence

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MWKKQQKVEEDAAAAAAVCNEQLLADGDPVVNNDTVMNMEICLLKLNKSEEGNIGLTNPNSPSIPNPTPPKLPPTQQSHQQHQSNLSSPTPSSTLLPLLPPLPRAQALLL
QMATLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSNSASTPLDGTPSTSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVL
DVLFDDYADYQRPRRVKTKDDVENDYLCSTTVASQLKLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKVAESNEKTIELMFEP
PAPLPTDANPLANLAAIQGLLPPNITVPSGWKPGMPVELPTDLPMPPPGWKPGDPVPLPPLDSLPVPRVEEPQLRPNALPGLHKPPEPIQVRPVQLDILDQDDDSSDYTS
DEGSSEDDD

Sgr017209 (gene) of Monk fruit (Qingpiguo) v1 genome