; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr017236 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr017236
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionGlycine rich RNA binding protein
Genome locationtig00153033:830312..831612
RNA-Seq ExpressionSgr017236
SyntenySgr017236
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143719.1 organelle RRM domain-containing protein 2, mitochondrial [Momordica charantia]9.4e-6389.73Show/hide
Query:  MAFFSSVRRVLNGS-----SSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGM
        MAF SSVRRVLNGS     SSIL+SQWTT+RLSSTLTSPKLFISGLSRLTTDEKL+EAF+SFGQLVEAKVITDRAT RSKGFGFVTY TIE+AEKAREGM
Subjt:  MAFFSSVRRVLNGS-----SSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGM

Query:  NAKFLDGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG
        NAKFLDGWVIFVDPAKPREPR PPPQPQSETSEFGIRTNKTIGW G
Subjt:  NAKFLDGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG

XP_022962832.1 organelle RRM domain-containing protein 2, mitochondrial [Cucurbita moschata]2.9e-6491.72Show/hide
Query:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA
        MAFFS+VRRVLNG   SSS+LRSQWT  RLSSTLTSPKLFISGLSRLTTDEKL+EAFTSFGQLVEAKVITDRAT RSKGFGFVTY+TIEEAEKAREGMNA
Subjt:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA

Query:  KFLDGWVIFVDPAKPREPRPPPPQPQS-ETSEFGIRTNKTIGWSG
        KFLDGWVIFVDPAKPREPRPPPPQPQS ETSEFGIRTNKTIGW G
Subjt:  KFLDGWVIFVDPAKPREPRPPPPQPQS-ETSEFGIRTNKTIGWSG

XP_022972736.1 organelle RRM domain-containing protein 2, mitochondrial [Cucurbita maxima]4.2e-6391.1Show/hide
Query:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA
        MAFFS+VRRVLNG   SSS+LRSQWT+ RLSSTLTSPKLFISGLSRLTTDEKL+EAFTSFGQLVEAKVITDRAT RSKGFGFVTY+TIEEAEKAREGMNA
Subjt:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA

Query:  KFLDGWVIFVDPAKPREPR-PPPPQPQS-ETSEFGIRTNKTIGWSG
        KFLDGWVIFVDPAKPREPR PPPPQPQS ETSEFGIRTNKTIGW G
Subjt:  KFLDGWVIFVDPAKPREPR-PPPPQPQS-ETSEFGIRTNKTIGWSG

XP_023517167.1 organelle RRM domain-containing protein 2, mitochondrial [Cucurbita pepo subsp. pepo]1.7e-6491.72Show/hide
Query:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA
        MAFFS+VRRVLNG   SSS+LRSQWT+ RLSSTLTSPKLFISGLSRLTTDEKL+EAFTSFGQLVEAKVITDRAT RSKGFGFVTY+TIEEAEKAREGMNA
Subjt:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA

Query:  KFLDGWVIFVDPAKPREPRPPPPQPQS-ETSEFGIRTNKTIGWSG
        KFLDGWVIFVDPAKPREPRPPPPQPQS ETSEFGIRTNKTIGW G
Subjt:  KFLDGWVIFVDPAKPREPRPPPPQPQS-ETSEFGIRTNKTIGWSG

XP_038881167.1 organelle RRM domain-containing protein 2, mitochondrial [Benincasa hispida]1.5e-6087.59Show/hide
Query:  MAFFSSVRRVLNG--SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAK
        MAFFS+VRRVLNG  SSSILRSQWT +RLSSTLTSP+LFISGLSRLTTDEKL+EAF+SFGQLVEAKVITDR T RSKGFGFV+Y TIEEAEKARE MNAK
Subjt:  MAFFSSVRRVLNG--SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAK

Query:  FLDGWVIFVDPAKPREPRP--PPPQPQSETSEFGIRTNKTIGWSG
        FLDGWVIFVDPAKPREPR   PPPQPQ ETSEFGIRTNKTIGW G
Subjt:  FLDGWVIFVDPAKPREPRP--PPPQPQSETSEFGIRTNKTIGWSG

TrEMBL top hitse value%identityAlignment
A0A1S3BHV3 glycine-rich RNA-binding protein 4, mitochondrial6.2e-6084.93Show/hide
Query:  MAFFSSVRRVLNG-----SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGM
        MAFFS+VRRVL+G     SSSILRSQW  +RLSSTLTSPKLFISGLSRLTTDEKL+EAF+SFGQLV+AKV+TDRAT RSKGF FVTY+TIEEAE+AR+ M
Subjt:  MAFFSSVRRVLNG-----SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGM

Query:  NAKFLDGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG
        NAKFLDGWVIFVDPAKPREPR PPPQPQSETSEFGIRTNKTIGW G
Subjt:  NAKFLDGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG

A0A6J1CQ59 organelle RRM domain-containing protein 2, mitochondrial4.6e-6389.73Show/hide
Query:  MAFFSSVRRVLNGS-----SSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGM
        MAF SSVRRVLNGS     SSIL+SQWTT+RLSSTLTSPKLFISGLSRLTTDEKL+EAF+SFGQLVEAKVITDRAT RSKGFGFVTY TIE+AEKAREGM
Subjt:  MAFFSSVRRVLNGS-----SSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGM

Query:  NAKFLDGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG
        NAKFLDGWVIFVDPAKPREPR PPPQPQSETSEFGIRTNKTIGW G
Subjt:  NAKFLDGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG

A0A6J1HDN1 organelle RRM domain-containing protein 2, mitochondrial1.4e-6491.72Show/hide
Query:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA
        MAFFS+VRRVLNG   SSS+LRSQWT  RLSSTLTSPKLFISGLSRLTTDEKL+EAFTSFGQLVEAKVITDRAT RSKGFGFVTY+TIEEAEKAREGMNA
Subjt:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA

Query:  KFLDGWVIFVDPAKPREPRPPPPQPQS-ETSEFGIRTNKTIGWSG
        KFLDGWVIFVDPAKPREPRPPPPQPQS ETSEFGIRTNKTIGW G
Subjt:  KFLDGWVIFVDPAKPREPRPPPPQPQS-ETSEFGIRTNKTIGWSG

A0A6J1I6S8 organelle RRM domain-containing protein 2, mitochondrial2.0e-6391.1Show/hide
Query:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA
        MAFFS+VRRVLNG   SSS+LRSQWT+ RLSSTLTSPKLFISGLSRLTTDEKL+EAFTSFGQLVEAKVITDRAT RSKGFGFVTY+TIEEAEKAREGMNA
Subjt:  MAFFSSVRRVLNG---SSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNA

Query:  KFLDGWVIFVDPAKPREPR-PPPPQPQS-ETSEFGIRTNKTIGWSG
        KFLDGWVIFVDPAKPREPR PPPPQPQS ETSEFGIRTNKTIGW G
Subjt:  KFLDGWVIFVDPAKPREPR-PPPPQPQS-ETSEFGIRTNKTIGWSG

D7TQ88 RRM domain-containing protein1.3e-5480.14Show/hide
Query:  MAFFSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFL
        MAF SS RRVL GSS+IL+SQ++  R +ST+TSPKLF+SGLSRLTTDEKLKEAF+ FGQL+EAKVITDR + RSKGFGFVTYTT+EEAEKAREGMNAKFL
Subjt:  MAFFSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFL

Query:  DGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG
        DGWVIFVDPAKPREPR PPPQ + E+SE G RTNKTIGW G
Subjt:  DGWVIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIGWSG

SwissProt top hitse value%identityAlignment
Q6YWP9 Organelle RRM domain-containing protein 1, chloroplastic6.9e-1636.3Show/hide
Query:  FSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGW
        F S  +   G  S   S+ T     + + + +LF++GLS  T+++ L+ AF  FG+LVE K+I D+ ++RSKG+ F+ YTT E    A + MN + ++GW
Subjt:  FSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGW

Query:  VIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIG
        +I VD AK R     PP   S  S   +R+    G
Subjt:  VIFVDPAKPREPRPPPPQPQSETSEFGIRTNKTIG

Q8L440 Organelle RRM domain-containing protein 1, chloroplastic1.2e-1546.32Show/hide
Query:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQP
        S  + + KLFI+GLS  T+++ L+ AF  FG+LVE K+I D+ ++RSKG+ F+ YTT E A  A + MN K ++GW+I VD AK +  R    QP
Subjt:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQP

Q9FFZ6 Small RNA-binding protein 11, chloroplastic1.2e-1552.5Show/hide
Query:  KLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE
        KLFI GLS  TT++ L EAF+  GQ+VEA+++ DR + RSKGFGFVT+ + +EA+KA    N + L+G  IFVD AK ++
Subjt:  KLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE

Q9FIU6 Organelle RRM domain-containing protein 2, mitochondrial7.1e-2153.68Show/hide
Query:  SPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQPQSETS
        S  LF+SGLS+ TT E L+ AF  FG++ +AKV+TDR +  SKGFGFV Y T+E++ K   GM+ KFLDGWVIF + A+PRE +    QPQ+  S
Subjt:  SPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQPQSETS

Q9FX45 Organelle RRM domain-containing protein 6, chloroplastic4.8e-1745.37Show/hide
Query:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPR------EPRPPPPQ
        SS+    KL++SGLS  TT++ L++ F  FG L+   ++ D+   R KGF F+ Y T EEA KA +GM+ KFLDG VIFV+ AK R      +PR   P+
Subjt:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPR------EPRPPPPQ

Query:  PQSETSEF
        PQS+   F
Subjt:  PQSETSEF

Arabidopsis top hitse value%identityAlignment
AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-1845.37Show/hide
Query:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPR------EPRPPPPQ
        SS+    KL++SGLS  TT++ L++ F  FG L+   ++ D+   R KGF F+ Y T EEA KA +GM+ KFLDG VIFV+ AK R      +PR   P+
Subjt:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPR------EPRPPPPQ

Query:  PQSETSEF
        PQS+   F
Subjt:  PQSETSEF

AT2G37510.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-4770Show/hide
Query:  MAFFSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFL
        MAF SS RR++ GSSS+L S    +R  STLTSP+LF+SGLSRLTT+EKL++AF SFGQLV+A+VITDR + RSKGFGFVTY TIE+AEKA+  MNAKFL
Subjt:  MAFFSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFL

Query:  DGWVIFVDPAKPREPRPPPPQ-PQSETSEFGIRTNKTIGW
        DGWVIFVDPA+PREPR P  Q P   +SE G  TNKTIGW
Subjt:  DGWVIFVDPAKPREPRPPPPQ-PQSETSEFGIRTNKTIGW

AT3G20930.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.3e-1746.32Show/hide
Query:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQP
        S  + + KLFI+GLS  T+++ L+ AF  FG+LVE K+I D+ ++RSKG+ F+ YTT E A  A + MN K ++GW+I VD AK +  R    QP
Subjt:  SSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQP

AT5G06210.1 RNA binding (RRM/RBD/RNP motifs) family protein8.3e-1752.5Show/hide
Query:  KLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE
        KLFI GLS  TT++ L EAF+  GQ+VEA+++ DR + RSKGFGFVT+ + +EA+KA    N + L+G  IFVD AK ++
Subjt:  KLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPRE

AT5G54580.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-2253.68Show/hide
Query:  SPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQPQSETS
        S  LF+SGLS+ TT E L+ AF  FG++ +AKV+TDR +  SKGFGFV Y T+E++ K   GM+ KFLDGWVIF + A+PRE +    QPQ+  S
Subjt:  SPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPPQPQSETS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCTTCTCCAGTGTAAGGCGCGTTCTTAATGGATCTTCCTCCATTCTCCGATCTCAGTGGACTACGATTCGTCTCAGCTCAACTCTCACCTCCCCTAAGCTCTT
CATAAGTGGTCTTTCAAGATTAACAACAGATGAGAAGCTCAAGGAAGCCTTTACTTCCTTCGGTCAGCTTGTAGAAGCGAAAGTCATAACTGATCGGGCGACAAGAAGAT
CAAAGGGATTCGGTTTTGTAACCTACACTACTATAGAAGAGGCTGAGAAAGCTAGAGAAGGAATGAATGCCAAGTTTCTGGATGGATGGGTTATTTTTGTTGATCCTGCC
AAACCCAGGGAGCCTAGGCCTCCTCCTCCACAGCCTCAATCTGAGACCTCTGAATTTGGTATCAGAACAAACAAGACAATTGGTTGGAGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCTTCTCCAGTGTAAGGCGCGTTCTTAATGGATCTTCCTCCATTCTCCGATCTCAGTGGACTACGATTCGTCTCAGCTCAACTCTCACCTCCCCTAAGCTCTT
CATAAGTGGTCTTTCAAGATTAACAACAGATGAGAAGCTCAAGGAAGCCTTTACTTCCTTCGGTCAGCTTGTAGAAGCGAAAGTCATAACTGATCGGGCGACAAGAAGAT
CAAAGGGATTCGGTTTTGTAACCTACACTACTATAGAAGAGGCTGAGAAAGCTAGAGAAGGAATGAATGCCAAGTTTCTGGATGGATGGGTTATTTTTGTTGATCCTGCC
AAACCCAGGGAGCCTAGGCCTCCTCCTCCACAGCCTCAATCTGAGACCTCTGAATTTGGTATCAGAACAAACAAGACAATTGGTTGGAGTGGTTGA
Protein sequenceShow/hide protein sequence
MAFFSSVRRVLNGSSSILRSQWTTIRLSSTLTSPKLFISGLSRLTTDEKLKEAFTSFGQLVEAKVITDRATRRSKGFGFVTYTTIEEAEKAREGMNAKFLDGWVIFVDPA
KPREPRPPPPQPQSETSEFGIRTNKTIGWSG