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Sgr017445 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr017445
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionSmall nuclear ribonucleoprotein E
Genome locationtig00153048:154621..158622
RNA-Seq ExpressionSgr017445
SyntenySgr017445
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
InterPro domainsIPR001163 - LSM domain, eukaryotic/archaea-type
IPR010920 - LSM domain superfamily
IPR027078 - Small nuclear ribonucleoprotein E


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063999.1 small nuclear ribonucleoprotein E-like [Cucumis melo var. makuwa]1.3e-1535.5Show/hide
Query:  FCICPSFF------VPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNRLAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFF
        F +C +F       V  ASLE ELD QKARIQIWLFEQ+DLRIEGRII                                                    
Subjt:  FCICPSFF------VPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNRLAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFF

Query:  FTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDDHPAEHIIGIELALPL
                                                              GFDEYMNLVLDDAEEVN+KKKSKK LGENDDHPAEHII I+ +L L
Subjt:  FTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDDHPAEHIIGIELALPL

KAB5514425.1 hypothetical protein DKX38_028331 [Salix brachista]3.3e-1435.19Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        M STKVQRIMTQPI                  NL  RF                        KARIQ WLFEQ+DLRIEGRII    C            
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
        L +L+  +F +   H+ C      ++   +   F+F     + +     +H S+E+           HG           +  +G   +GFDEYMNLVLD
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        DAEEVNIKKKSKK+LG
Subjt:  DAEEVNIKKKSKKTLG

KAG6739774.1 hypothetical protein POTOM_057389 [Populus tomentosa]6.4e-1032.87Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        MASTKVQRIMTQPI                  NL  RF                        KARIQIWLFEQ+DLRIEGRI                  
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
            I N+++      P                 F  +L L P       H+++                     V+   E+     + GFDEYMNLVL+
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        DAEEVNIKKKS+K+LG
Subjt:  DAEEVNIKKKSKKTLG

KAG6770106.1 hypothetical protein POTOM_025774 [Populus tomentosa]6.4e-1034.26Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        MASTKVQRIMTQPI                  NL  RF                        KARIQIWLFEQ+DLRIEGRII+                
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
            +L+             K+  ++    C    F        SF  D    M   DN                    +E   G    GFDEYMNLVL+
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        DAEEVNIKKKS+K+LG
Subjt:  DAEEVNIKKKSKKTLG

KAG7023407.1 Small nuclear ribonucleoprotein E [Cucurbita argyrosperma subsp. argyrosperma]1.7e-1079.17Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDDHPAEHIIGI
        R+ G I+ GFDEYMNLVLDDAEEVN+KKKSKK LG NDDHPA+HII I
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDDHPAEHIIGI

TrEMBL top hitse value%identityAlignment
A0A0D3F050 Small nuclear ribonucleoprotein E3.0e-1334.26Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        MASTKVQRIMTQPI  I        A        FL F    C+C         L  E   QKARIQIWLFEQ+DLRIEGRII+     +S +     + 
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
        ++W                        T+D T+     L+   + F                            ++I +   +H +  +GFDEYMNLVLD
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        +AEE+NIKK ++K+LG
Subjt:  DAEEVNIKKKSKKTLG

A0A0D9YLN7 Small nuclear ribonucleoprotein E3.0e-1334.26Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        MASTKVQRIMTQPI  I        A        FL F    C+C         L  E   QKARIQIWLFEQ+DLRIEGRII+     +S +     + 
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
        ++W                        T+D T+     L+   + F                            ++I +   +H +  +GFDEYMNLVLD
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        +AEE+NIKK ++K+LG
Subjt:  DAEEVNIKKKSKKTLG

A0A0E0CEU5 Small nuclear ribonucleoprotein E9.6e-1232.41Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        MASTKVQRIMTQPI                  NL  RF                        KARIQIWLFEQ+DLRIEGRII+              N 
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
        + ++   +F+  +     + K           L FFT + +VP++                                     VH    +GFDEYMNLVLD
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        +AEE+NIKK ++K+LG
Subjt:  DAEEVNIKKKSKKTLG

A0A5A7VEN8 Small nuclear ribonucleoprotein E6.4e-1635.5Show/hide
Query:  FCICPSFF------VPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNRLAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFF
        F +C +F       V  ASLE ELD QKARIQIWLFEQ+DLRIEGRII                                                    
Subjt:  FCICPSFF------VPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNRLAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFF

Query:  FTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDDHPAEHIIGIELALPL
                                                              GFDEYMNLVLDDAEEVN+KKKSKK LGENDDHPAEHII I+ +L L
Subjt:  FTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDDHPAEHIIGIELALPL

A0A5N5JA39 Small nuclear ribonucleoprotein E1.6e-1435.19Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR
        M STKVQRIMTQPI                  NL  RF                        KARIQ WLFEQ+DLRIEGRII    C            
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNR

Query:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD
        L +L+  +F +   H+ C      ++   +   F+F     + +     +H S+E+           HG           +  +G   +GFDEYMNLVLD
Subjt:  LAWLILNIFLDFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLD

Query:  DAEEVNIKKKSKKTLG
        DAEEVNIKKKSKK+LG
Subjt:  DAEEVNIKKKSKKTLG

SwissProt top hitse value%identityAlignment
A4FUI2 Small nuclear ribonucleoprotein E8.4e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I+ GFDEYMNLVLDDAEE++ K KS+K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

P62303 Small nuclear ribonucleoprotein E8.4e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I+ GFDEYMNLVLDDAEE++ K KS+K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

P62304 Small nuclear ribonucleoprotein E8.4e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I+ GFDEYMNLVLDDAEE++ K KS+K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

P62305 Small nuclear ribonucleoprotein E8.4e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I+ GFDEYMNLVLDDAEE++ K KS+K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

Q7ZUG0 Small nuclear ribonucleoprotein E6.4e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I+ GFDEYMNLVLDDAEEV++K K++K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

Arabidopsis top hitse value%identityAlignment
AT2G18740.1 Small nuclear ribonucleoprotein family protein5.4e-0745.12Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRI
        MASTKVQRIMTQPI                  NL  RF                        KARIQIWLFEQ+DLRIEGRI
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRI

AT2G18740.1 Small nuclear ribonucleoprotein family protein2.3e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I  GFDEYMNLVLD+AEEV+IKK ++K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

AT2G18740.2 Small nuclear ribonucleoprotein family protein5.4e-0745.12Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRI
        MASTKVQRIMTQPI                  NL  RF                        KARIQIWLFEQ+DLRIEGRI
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRI

AT2G18740.2 Small nuclear ribonucleoprotein family protein2.3e-0568.57Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I  GFDEYMNLVLD+AEEV+IKK ++K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG

AT4G30330.1 Small nuclear ribonucleoprotein family protein5.4e-0745.12Show/hide
Query:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRI
        MASTKVQRIMTQPI                  NL  RF                        KARIQIWLFEQ+DLRIEGRI
Subjt:  MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRI

AT4G30330.1 Small nuclear ribonucleoprotein family protein5.9e-0671.43Show/hide
Query:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG
        R+ G I  GFDEYMNLVLD+AEEV+IKKK++K LG
Subjt:  RVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCACCAAAGTGCAGAGGATTATGACCCAGCCGATTGTGCGTATATCTATTCATTGTTCTTACTACGCTGCCTTTATCTGGGGCTGGCTTAATCTATTTCTACG
CTTTACTGATCGTTTCTGTATCTGTCCTTCGTTTTTTGTTCCCGGTGCTTCTTTGGAACCAGAACTTGATATTCAGAAAGCCCGTATTCAGATTTGGCTATTTGAGCAAA
GGGACCTTAGGATCGAAGGCCGAATTATTATAGACCAAGAGTGTAGATCATCTCCCATCGCTGGAGCTGCTTACAACAGGCTAGCTTGGCTAATTCTGAATATATTTTTG
GACTTTCTACCTCATACTCCCTGTAACAAGAAAAAGTCAGCTCATTCATCTACAGAAGATTGCACCTTGTTCTTCTTTACTCAATTAAGCCTGGTTCCTATTTCTTTTGT
GCGGGATTCTCATCAATCTATGGAGTATTGTGACAACGTTGGTTTCAGAATCCCCTCCCCTCACGGGTATAAGTCAGGAGATTCTGTAATTTACATGCAGGAACGTGTTC
ATGGCATTATCTTGGAAGGATTTGATGAGTACATGAATTTAGTTCTTGATGATGCTGAGGAAGTCAATATTAAGAAAAAGAGCAAAAAGACACTCGGGGAAAATGATGAT
CATCCAGCAGAACACATTATTGGGATAGAGTTGGCACTTCCATTGGATATTGGTTGCCCAGAATTTGTTTCACCTGGGCCTCAGCTGATTGTCTTCATCCACGGAGAAAA
AAGCATCACCCTGCCTATGATGCGTTCTAAATTTTACTTTTTAGAGGATTTATTAAGAATCTTTTTAGATAAACTCGCATCTTTGTCCGCAGTCAATTGCTTTGGGTACG
TAGGCAATCCGGAAGTGGGCAAAGAGGAAGCGAAGCGGGTAAGGTGCGGGGGTTGTAGTGGCTGGTGGGACACATATGGGGTCAGGGAATCACGCCCCTCAGCTTTCTTT
GTTTATGGAGACCTCCGTTTCTTCTATCCCGTCTATCTGGCCATTGTTGTATTAATGTGGCCTTTGGTGATAGTAATTGCTCATGAATTGTATGATTCTGTTGCCCTCCC
GATTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCACCAAAGTGCAGAGGATTATGACCCAGCCGATTGTGCGTATATCTATTCATTGTTCTTACTACGCTGCCTTTATCTGGGGCTGGCTTAATCTATTTCTACG
CTTTACTGATCGTTTCTGTATCTGTCCTTCGTTTTTTGTTCCCGGTGCTTCTTTGGAACCAGAACTTGATATTCAGAAAGCCCGTATTCAGATTTGGCTATTTGAGCAAA
GGGACCTTAGGATCGAAGGCCGAATTATTATAGACCAAGAGTGTAGATCATCTCCCATCGCTGGAGCTGCTTACAACAGGCTAGCTTGGCTAATTCTGAATATATTTTTG
GACTTTCTACCTCATACTCCCTGTAACAAGAAAAAGTCAGCTCATTCATCTACAGAAGATTGCACCTTGTTCTTCTTTACTCAATTAAGCCTGGTTCCTATTTCTTTTGT
GCGGGATTCTCATCAATCTATGGAGTATTGTGACAACGTTGGTTTCAGAATCCCCTCCCCTCACGGGTATAAGTCAGGAGATTCTGTAATTTACATGCAGGAACGTGTTC
ATGGCATTATCTTGGAAGGATTTGATGAGTACATGAATTTAGTTCTTGATGATGCTGAGGAAGTCAATATTAAGAAAAAGAGCAAAAAGACACTCGGGGAAAATGATGAT
CATCCAGCAGAACACATTATTGGGATAGAGTTGGCACTTCCATTGGATATTGGTTGCCCAGAATTTGTTTCACCTGGGCCTCAGCTGATTGTCTTCATCCACGGAGAAAA
AAGCATCACCCTGCCTATGATGCGTTCTAAATTTTACTTTTTAGAGGATTTATTAAGAATCTTTTTAGATAAACTCGCATCTTTGTCCGCAGTCAATTGCTTTGGGTACG
TAGGCAATCCGGAAGTGGGCAAAGAGGAAGCGAAGCGGGTAAGGTGCGGGGGTTGTAGTGGCTGGTGGGACACATATGGGGTCAGGGAATCACGCCCCTCAGCTTTCTTT
GTTTATGGAGACCTCCGTTTCTTCTATCCCGTCTATCTGGCCATTGTTGTATTAATGTGGCCTTTGGTGATAGTAATTGCTCATGAATTGTATGATTCTGTTGCCCTCCC
GATTCTTTAG
Protein sequenceShow/hide protein sequence
MASTKVQRIMTQPIVRISIHCSYYAAFIWGWLNLFLRFTDRFCICPSFFVPGASLEPELDIQKARIQIWLFEQRDLRIEGRIIIDQECRSSPIAGAAYNRLAWLILNIFL
DFLPHTPCNKKKSAHSSTEDCTLFFFTQLSLVPISFVRDSHQSMEYCDNVGFRIPSPHGYKSGDSVIYMQERVHGIILEGFDEYMNLVLDDAEEVNIKKKSKKTLGENDD
HPAEHIIGIELALPLDIGCPEFVSPGPQLIVFIHGEKSITLPMMRSKFYFLEDLLRIFLDKLASLSAVNCFGYVGNPEVGKEEAKRVRCGGCSGWWDTYGVRESRPSAFF
VYGDLRFFYPVYLAIVVLMWPLVIVIAHELYDSVALPIL