CuGenDBv2

Gene ID	Sgr017554
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	Transducin/WD40 repeat-like superfamily protein, putative isoform 2
Genome location	tig00153049:659966..674357
RNA-Seq Expression	Sgr017554
Synteny	Sgr017554
Gene Ontology terms	GO:0030687 - preribosome, large subunit precursor (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052839.1 Transducin/WD40 repeat-like superfamily protein, putative isoform 2 [Cucumis melo var. makuwa]

1.2e-70

91.18

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Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

TYK18832.1 Transducin/WD40 repeat-like superfamily protein, putative isoform 2 [Cucumis melo var. makuwa]

1.2e-70

91.18

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Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

XP_016900864.1 PREDICTED: uncharacterized protein LOC103492074 isoform X1 [Cucumis melo]

1.2e-70

91.18

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

XP_016900865.1 PREDICTED: uncharacterized protein LOC103492074 isoform X2 [Cucumis melo]

1.2e-70

91.18

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

XP_022154069.1 uncharacterized protein LOC111021413 isoform X5 [Momordica charantia]

1.3e-72

94.85

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Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMS+D LFLRKPSWLPTDSI+AVGSSSDEGIHLLDFHPDSRSPSHV YNDDL  
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        AGGENKKRQNRFVKLSEGVTSCAAHPLNGTI+AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DXZ9 uncharacterized protein LOC103492074 isoform X1

5.8e-71

91.18

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

A0A1S4DYR9 uncharacterized protein LOC103492074 isoform X2

5.8e-71

91.18

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

A0A5A7UH29 Transducin/WD40 repeat-like superfamily protein, putative isoform 2

5.8e-71

91.18

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Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

A0A5D3D5N4 Transducin/WD40 repeat-like superfamily protein, putative isoform 2

5.8e-71

91.18

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Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID NPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAW+NDSN+ TD LFLRKPSWLPTDSIY VGSSSDEGIHLLDFHPDSRSPSHV YND+LCG
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        +G E+KKRQNRFVKLSEGVTSCAAHPLNGTI AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

A0A6J1DKZ0 uncharacterized protein LOC111021413 isoform X5

6.2e-73

94.85

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Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMS+D LFLRKPSWLPTDSI+AVGSSSDEGIHLLDFHPDSRSPSHV YNDDL  
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK
        AGGENKKRQNRFVKLSEGVTSCAAHPLNGTI+AGTK
Subjt:  AGGENKKRQNRFVKLSEGVTSCAAHPLNGTIVAGTK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G12920.1 Transducin/WD40 repeat-like superfamily protein

3.5e-52

66.67

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID+NP+ P+QLAFHLDDGWSG+LD+Y  +VTH+HCPPPAWL+ SN S DL+ LRKPSWLPT SIY VGS S++GIH+LDFHP SRSP HV Y++D   
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKR-----QNRFVKLSEGVTSCAAHPLNGTIVAGTK
            N+KR     +N+FV LSE VT CAAHPLNG IVAGT+
Subjt:  AGGENKKR-----QNRFVKLSEGVTSCAAHPLNGTIVAGTK

AT5G12920.2 Transducin/WD40 repeat-like superfamily protein

3.5e-52

66.67

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID+NP+ P+QLAFHLDDGWSG+LD+Y  +VTH+HCPPPAWL+ SN S DL+ LRKPSWLPT SIY VGS S++GIH+LDFHP SRSP HV Y++D   
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKR-----QNRFVKLSEGVTSCAAHPLNGTIVAGTK
            N+KR     +N+FV LSE VT CAAHPLNG IVAGT+
Subjt:  AGGENKKR-----QNRFVKLSEGVTSCAAHPLNGTIVAGTK

AT5G12920.3 Transducin/WD40 repeat-like superfamily protein

3.5e-52

66.67

Show/hide

Query:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG
        HSID+NP+ P+QLAFHLDDGWSG+LD+Y  +VTH+HCPPPAWL+ SN S DL+ LRKPSWLPT SIY VGS S++GIH+LDFHP SRSP HV Y++D   
Subjt:  HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCG

Query:  AGGENKKR-----QNRFVKLSEGVTSCAAHPLNGTIVAGTK
            N+KR     +N+FV LSE VT CAAHPLNG IVAGT+
Subjt:  AGGENKKR-----QNRFVKLSEGVTSCAAHPLNGTIVAGTK

Sequences

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CDS sequence

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TACACTCAATTGATCTCAACCCAGCTTGTCCTTATCAGTTGGCCTTCCATCTTGATGACGGTTGGTCAGGTATTTTGGATGTTTATAATTTTCAGGTCACACATATTCAC
TGCCCACCCCCAGCTTGGTTAAATGATTCCAACATGTCCACAGATCTATTATTTTTGAGGAAACCATCATGGCTGCCGACAGATTCTATCTATGCGGTTGGATCGTCTTC
TGATGAGGGCATTCATCTCTTGGATTTTCATCCTGACTCCCGCTCTCCCAGCCATGTGGGCTACAATGATGATTTATGTGGTGCTGGAGGAGAAAACAAAAAACGACAGA
ACAGGTTTGTTAAGTTGTCTGAAGGAGTTACTTCTTGCGCTGCTCACCCCCTCAATGGTACCATCGTAGCTGGAACGAAGGGGTGGAAGACCACCGAAGGGGTTGAGGGA
CTAAGAGCGCAGAGGCTAGATGACAGTGAGGAGGTGAGGAAGGGGCGGTTCTCATGCAAGTCCGAGTCCCTTTCTCAAAATCTCTCTGTTGTGGATGATGCTATTCTTTC
AGGTTCGAGTAAGCAAAATGGAACCTCGCCATGTAGAGGCAGGCCATCGAGTACGCATCGCGCCAGATTGGGAGGACAGAGTGCCAAGGCCCGGAATGAAGCTGCTCCCA
AGCCATCTCGCAGGCGGCCTCGGCGGCGCGTAAATCACCGGCAGCAGCTAGTGGAGAAGAGACGGCGACTCGGCGTCGAGAAGTGGGGCATCGAAGTCGTAAGAGGCGGA
AGGGGCGCCGTTGGCTTCCGACGAAGACATGGCCGGCGGCGAGAGAGAGAAGGGTCAGCTGGAGAAGCCAAGGTCAAGGAGGAAGAAAGTGCAAATGGAGTGATTGAGCA
GTTGAGTGCTTTTGCAATTGGAAAGTGGTTAAATAAATATTTTAGTTGA

mRNA sequence

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Protein sequence

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HSIDLNPACPYQLAFHLDDGWSGILDVYNFQVTHIHCPPPAWLNDSNMSTDLLFLRKPSWLPTDSIYAVGSSSDEGIHLLDFHPDSRSPSHVGYNDDLCGAGGENKKRQN
RFVKLSEGVTSCAAHPLNGTIVAGTKGWKTTEGVEGLRAQRLDDSEEVRKGRFSCKSESLSQNLSVVDDAILSGSSKQNGTSPCRGRPSSTHRARLGGQSAKARNEAAPK
PSRRRPRRRVNHRQQLVEKRRRLGVEKWGIEVVRGGRGAVGFRRRHGRRREREGSAGEAKVKEEESANGVIEQLSAFAIGKWLNKYFS

Sgr017554 (gene) of Monk fruit (Qingpiguo) v1 genome