CuGenDBv2

Gene ID	Sgr017698
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	coiled-coil domain-containing protein 12-like
Genome location	tig00153054:882287..885438
RNA-Seq Expression	Sgr017698
Synteny	Sgr017698
Gene Ontology terms	GO:0005684 - U2-type spliceosomal complex (cellular component) GO:0071014 - post-mRNA release spliceosomal complex (cellular component)
InterPro domains	IPR013169 - mRNA splicing factor Cwf18-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6572999.1 Coiled-coil domain-containing protein 12, partial [Cucurbita argyrosperma subsp. sororia]

4.8e-65

90.26

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +D+ENG     EE NL MKFRNYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

XP_022155130.1 coiled-coil domain-containing protein 12 isoform X1 [Momordica charantia]

2.8e-65

90.26

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAARKERLRALRAAQELLN PDEKTSG +DK+NG     EETNLSMKFRNYVPHDKELQEGKLAPP+LPKFEDPVA EPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLM+EQEKQK+S EGDD QNGTEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

XP_022955111.1 coiled-coil domain-containing protein 12-like [Cucurbita moschata]

4.8e-65

90.26

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +D+ENG     EE NL MKFRNYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

XP_022994277.1 coiled-coil domain-containing protein 12-like isoform X1 [Cucurbita maxima]

4.3e-66

90.91

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSG +D+ENG     EETNL MKFRNYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QNGTEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

XP_023542240.1 coiled-coil domain-containing protein 12-like [Cucurbita pepo subsp. pepo]

3.3e-66

91.56

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +DKENG     EETNL MKFRNYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3ATB1 coiled-coil domain-containing protein 12

2.6e-61

86.27

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDS EQVAAARKERL+ALRAAQELLNA DEK S  +DKENG     +ETNL+MKFRNYVPHDKELQEGKLAPP+LPKFEDPV TEPPQ KEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQ+ EGDD+QNG E
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE

A0A6J1DLK0 coiled-coil domain-containing protein 12 isoform X1

1.4e-65

90.26

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAARKERLRALRAAQELLN PDEKTSG +DK+NG     EETNLSMKFRNYVPHDKELQEGKLAPP+LPKFEDPVA EPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLM+EQEKQK+S EGDD QNGTEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

A0A6J1E719 coiled-coil domain-containing protein 12-like

4.8e-63

88.46

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG--------EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDP
        MATE+DSVEQVAAARKERLRALRAAQELLNA DEK SG +DKENG        EETNLSMKFRNYVPHDKELQEGKL PP LPKFEDPVATEPPQLKEDP
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG--------EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDP

Query:  FVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE
        FVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QN TE
Subjt:  FVNIAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE

A0A6J1GST8 coiled-coil domain-containing protein 12-like

2.3e-65

90.26

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAAR+ERLRALRAAQELLNAPDEKTSG +D+ENG     EE NL MKFRNYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QN TEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

A0A6J1JYP1 coiled-coil domain-containing protein 12-like isoform X1

2.1e-66

90.91

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN
        MATEEDSVEQVAAAR+ERLRALR AQELLNAPDEKTSG +D+ENG     EETNL MKFRNYVPHDKELQEGKLAPP+LPKFEDPVATEPPQLKEDPFVN
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENG-----EETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVN

Query:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG
        IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQS EGDD+QNGTEG
Subjt:  IAPKKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

SwissProt top hits

e value

%identity

Alignment

Q8R344 Coiled-coil domain-containing protein 12

7.5e-13

37.96

Show/hide

Query:  VEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEET--NLSMKFRNYVPHDKELQEGKL--APPIL----PKFEDPVATEPPQLKEDPFVNIAPK
        +E+ A  RKERL+ALR      +  D +      +E GEE   +  ++ RNYVP D++L+  ++  A P+      K +   A   P ++E    N+AP+
Subjt:  VEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEET--NLSMKFRNYVPHDKELQEGKL--APPIL----PKFEDPVATEPPQLKEDPFVNIAPK

Query:  KPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQ
        KP+WDL+RDV KKL+KLE+RTQ+A+ +L+ E+ K ++
Subjt:  KPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQ

Q8WUD4 Coiled-coil domain-containing protein 12

4.1e-11

35.57

Show/hide

Query:  VEQVAAARKERLRALRAAQELLNAPD--EKTSGADDKENGEETNLSMKFRNYVPHDKELQEGKL--APPIL----PKFEDPVATEPPQLKEDPFVNIAPK
        +E+ A  RKERL+ALR      +  D   KT    ++E   E +  ++ RNYVP D++L++ ++  A P+      K +   A   P ++E    N+AP+
Subjt:  VEQVAAARKERLRALRAAQELLNAPD--EKTSGADDKENGEETNLSMKFRNYVPHDKELQEGKL--APPIL----PKFEDPVATEPPQLKEDPFVNIAPK

Query:  KPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE
        KP+WDL+RDV KKL+KL++RTQ+A+ +L+ E+ K ++          TE
Subjt:  KPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G05070.1 CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 292 Blast hits to 292 proteins in 153 species: Archae - 0; Bacteria - 0; Metazoa - 118; Fungi - 83; Plants - 38; Viruses - 11; Other Eukaryotes - 42 (source: NCBI BLink).

9.3e-43

69.23

Show/hide

Query:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPP--QLKEDPFVNIAP
        MA+E++S+EQ AAARKE L+ALRAAQEL    + K  G D  E  EE   +MKFRNYVP  KELQ+GKLAPP LPKFEDP+   PP  + KEDPFVNIAP
Subjt:  MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPP--QLKEDPFVNIAP

Query:  KKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGD
        KKPNWDLRRDVQKKLDKLERRTQKA++KLMEEQEK+++  E D
Subjt:  KKPNWDLRRDVQKKLDKLERRTQKALYKLMEEQEKQKQSDEGD

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTACTGAAGAAGACTCCGTCGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAGAGCTCTCAGAGCTGCTCAGGAATTGTTAAACGCTCCAGATGAGAAGACTTC
TGGTGCCGACGATAAAGAGAATGGCGAAGAAACTAATCTTAGCATGAAATTTCGGAACTATGTTCCTCATGATAAGGAACTTCAGGAGGGTAAGCTTGCCCCACCTATAT
TGCCAAAGTTTGAGGACCCTGTTGCTACCGAGCCTCCACAATTAAAAGAGGACCCGTTTGTAAATATTGCTCCAAAGAAACCAAACTGGGACCTCAGAAGGGATGTGCAG
AAGAAGCTTGATAAGCTTGAAAGACGTACTCAGAAAGCATTATATAAGCTTATGGAGGAACAGGAAAAGCAAAAGCAGTCAGATGAAGGAGACGATGAGCAGAATGGTAC
AGAGGGATAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MATEEDSVEQVAAARKERLRALRAAQELLNAPDEKTSGADDKENGEETNLSMKFRNYVPHDKELQEGKLAPPILPKFEDPVATEPPQLKEDPFVNIAPKKPNWDLRRDVQ
KKLDKLERRTQKALYKLMEEQEKQKQSDEGDDEQNGTEG

Sgr017698 (gene) of Monk fruit (Qingpiguo) v1 genome