; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr017706 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr017706
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionsplicing factor U2af small subunit B-like
Genome locationtig00153055:177193..178026
RNA-Seq ExpressionSgr017706
SyntenySgr017706
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0089701 - U2AF (cellular component)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR003954 - RNA recognition motif domain, eukaryote
IPR009145 - U2 auxiliary factor small subunit
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142994.1 splicing factor U2af small subunit B-like [Momordica charantia]8.1e-15198.19Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEK
        LSPRNRKDYDRRERD+RDRD+RGNGRSKER+DRYDRDGGRRRHGSPRRSRSP  VREGSEERRARIEQWNREREEK
Subjt:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEK

XP_022941119.1 splicing factor U2af small subunit B-like [Cucurbita moschata]9.9e-14997.48Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRD+RGNGRSKER DRYDRDGGRRRHGSPRRSRSP  VREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

XP_023521110.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]9.2e-14796.39Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIE LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGR+RGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        LSPRNRK+ DRRERDYRDR+ RGNGRSKER DRYDRDGGRRRHGSPRRSRSP  VREGS ERRARIEQWNREREEKQ
Subjt:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

XP_023525325.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]2.9e-14897.12Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRD+RGNGRSKER DR+DRDGGRRRHGSPRRSRSP  VREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

XP_038900064.1 splicing factor U2af small subunit B-like [Benincasa hispida]6.8e-15097.83Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        LSPRNRK++DRRERDYRDRDYRGNGRSKE   R DRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
Subjt:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L4P8 Uncharacterized protein1.0e-14696.06Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR SRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPR--RSRSPVTVREGSEERRARIEQWNREREEKQ
        LSPRNRK++DRRERDYRDRDYRGNGRSKE   R+DRDGGRRR GSPR  RSRSPV VREGSEERRARIEQWNREREEKQ
Subjt:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPR--RSRSPVTVREGSEERRARIEQWNREREEKQ

A0A5A7VFL1 Splicing factor U2af small subunit B-like1.0e-14695.7Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYR SRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPR--RSRSPVTVREGSEERRARIEQWNREREEKQ
        LSPRNRK+YDRRERDYR+R+YRGNGRSKE   R+DRDGGRRRHGSPR  RSRSPV  REGSEERRARIEQWNREREEKQ
Subjt:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPR--RSRSPVTVREGSEERRARIEQWNREREEKQ

A0A6J1CN17 splicing factor U2af small subunit B-like3.9e-15198.19Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEK
        LSPRNRKDYDRRERD+RDRD+RGNGRSKER+DRYDRDGGRRRHGSPRRSRSP  VREGSEERRARIEQWNREREEK
Subjt:  LSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEK

A0A6J1FSM7 splicing factor U2af small subunit B-like4.8e-14997.48Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRD+RGNGRSKER DRYDRDGGRRRHGSPRRSRSP  VREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

A0A6J1IV82 splicing factor U2af small subunit B-like4.8e-14997.48Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR
        CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG R+RGYRRSRSRSR
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFG-RYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        SLSPRNRKDYDRRERDYRDRD+RGNGRSKER DRYDRDGGRRRHGSPRRSRSP  VREGSEERRARIEQWNREREEKQ
Subjt:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

SwissProt top hitse value%identityAlignment
A1A4K8 Splicing factor U2AF 35 kDa subunit2.2e-6652.48Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEEL-GKFGEIESLN
        MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLHN+PT S T+ L N+Y+ P   +   D     +   ++QEH+++F+E+++ E+  K+GE+E +N
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEEL-GKFGEIESLN

Query:  VCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSR
        VCDNL DH++GNVYV+FR E+ A  A+  L  R+++G+PI A+ SPVTDFREA CRQYE   C RGG+CNFMH+K I ++LRR+L+GR R   RSRSRSR
Subjt:  VCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSR

Query:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRR
            R+      R+R        G GR ++R    DR+   R
Subjt:  SLSPRNRKDYDRRERDYRDRDYRGNGRSKERFDRYDRDGGRR

Q6AUG0 Splicing factor U2af small subunit B3.0e-11674.03Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPT+SPT++L+NMYQRPDMITPGVDAQGQPIDP K+QEHFEDFYEDIYEEL KFGE+E+LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDNLADHMIGNVYVQFREE+QA AA  ALQGRFYSGRPII ++SPVTDFREATCRQ+EEN+CNRGGYCNFMHVK IG++LRRKL+G     RRS  RSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSPRNR-----KDYDRRERD--------------------YRDRD-YRGNG-----RSKERFDRYDRDGGRRRHGS-PRRSRSPVTVREGSEERRARIEQ
         SPR+R     +D  RRERD                    YR  D YRG G         R+DRYD DGGRRRHGS PRR+RSP  VRE SEERRA+IEQ
Subjt:  LSPRNR-----KDYDRRERD--------------------YRDRD-YRGNG-----RSKERFDRYDRDGGRRRHGS-PRRSRSPVTVREGSEERRARIEQ

Query:  WNREREEK
        WNREREEK
Subjt:  WNREREEK

Q9FMY5 Splicing factor U2af small subunit B8.2e-13085.41Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS
        CDNLADHMIGNVYV F+EED AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++LRRKLFGRY R YRR SRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS

Query:  RSLSPRNRKDYDR-RER-DYRDRDYRGNG-RSKERFDRYDRD-GGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREE
        RS+SPR ++++ R RER D RDRD  GNG RS +R +R+DRD GGRRRHGSP+RSRSP  VREGSEERRARIEQWNRER+E
Subjt:  RSLSPRNRKDYDR-RER-DYRDRDYRGNG-RSKERFDRYDRD-GGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREE

Q9S709 Splicing factor U2af small subunit A4.5e-12882.88Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS
        CDNLADHMIGNVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVK++ ++LRRKLFGRY R YR   RSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS

Query:  RSRSLSPRNRKDYDR-----RERDYRDRD---YR-GNG-RSKERFDRYDRDGGR-RRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        RSRS+SPRN++D DR     RE  +RDRD   YR G+G RS ER +R +RDG R RR  SP+R  SP   REGSEERRARIEQWNREREEK+
Subjt:  RSRSLSPRNRKDYDR-----RERDYRDRD---YR-GNG-RSKERFDRYDRDGGR-RRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

Q9ZQW8 Splicing factor U2af small subunit A6.5e-11174.06Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHN+P++SPTLLLSNMY RPDMITPG+DAQG PIDP KIQ  FEDFYEDI+EEL K+GEIESL+V
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS
        CDN ADHMIGNVYVQFREEDQAA ALQAL GR+YSGRPII +FSPV+DFREATCRQYEEN+CNRGGYCNFMHVK IG+DLR++LFG     RRS S  RS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRS

Query:  LSP---RNRKDYDR----RERDYRD------RDY--RGNGRSKERF-DRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
         SP     R+DYDR    R RD+ D       DY   G+ RS ER    YD DG RRRH S  R+RSP  VR+GSEERRA+IEQWNRERE  Q
Subjt:  LSP---RNRKDYDR----RERDYRD------RDY--RGNGRSKERF-DRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein8.4e-2932.24Show/hide
Query:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHM
        FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P  IT   D +G      + +  +E+FYED++ E  K+GE+ +  VC N + H+
Subjt:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHM

Query:  IGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN---NCNRGGYCNFMH-VKMIGKDLR----------------RKLFG--
         GNVYV +R  + A  A Q++ GR+++G+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H  +  G D                    LFG  
Subjt:  IGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN---NCNRGGYCNFMH-VKMIGKDLR----------------RKLFG--

Query:  --RYRGYRRSRSRSRS---LSPRNRKDYDRRER-------------DYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQ
          ++  +  S S + S   LS  + +   RR R              YR R Y G+ +   R D+  R       G    SR     RE  +ERR   + 
Subjt:  --RYRGYRRSRSRSRS---LSPRNRKDYDRRER-------------DYRDRDYRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQ

Query:  WNRE
         +R+
Subjt:  WNRE

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative3.2e-12982.88Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS
        CDNLADHMIGNVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVK++ ++LRRKLFGRY R YR   RSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRS

Query:  RSRSLSPRNRKDYDR-----RERDYRDRD---YR-GNG-RSKERFDRYDRDGGR-RRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        RSRS+SPRN++D DR     RE  +RDRD   YR G+G RS ER +R +RDG R RR  SP+R  SP   REGSEERRARIEQWNREREEK+
Subjt:  RSRSLSPRNRKDYDR-----RERDYRDRD---YR-GNG-RSKERFDRYDRDGGR-RRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

AT1G27650.2 U2 snRNP auxiliary factor small subunit, putative1.6e-9679.34Show/hide
Query:  MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFR
        MYQRPDMITPGVDAQGQP+DPRKIQEHFEDF+ED++EELGKFGEIESLN+CDNLADHMIGNVYVQF+EEDQAAAALQALQGRFYSGRPIIADFSPVTDFR
Subjt:  MYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFR

Query:  EATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRSRSRSLSPRNRKDYDR-----RERDYRDRD---YR-GNG-RSKERFDRYDR
        EATCRQYEENNCNRGGYCNFMHVK++ ++LRRKLFGRY R YR   RSRSRSRS+SPRN++D DR     RE  +RDRD   YR G+G RS ER +R +R
Subjt:  EATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYR---RSRSRSRSLSPRNRKDYDR-----RERDYRDRD---YR-GNG-RSKERFDRYDR

Query:  DGGR-RRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ
        DG R RR  SP+R  SP   REGSEERRARIEQWNREREEK+
Subjt:  DGGR-RRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein5.8e-13185.41Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS
        CDNLADHMIGNVYV F+EED AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++LRRKLFGRY R YRR SRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS

Query:  RSLSPRNRKDYDR-RER-DYRDRDYRGNG-RSKERFDRYDRD-GGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREE
        RS+SPR ++++ R RER D RDRD  GNG RS +R +R+DRD GGRRRHGSP+RSRSP  VREGSEERRARIEQWNRER+E
Subjt:  RSLSPRNRKDYDR-RER-DYRDRDYRGNG-RSKERFDRYDRD-GGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREE

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein5.8e-13185.41Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVD QGQP+DP KIQ+HFEDFYEDI+EEL KFGE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNV

Query:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS
        CDNLADHMIGNVYV F+EED AAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK I ++LRRKLFGRY R YRR SRSRS
Subjt:  CDNLADHMIGNVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY-RGYRR-SRSRS

Query:  RSLSPRNRKDYDR-RER-DYRDRDYRGNG-RSKERFDRYDRD-GGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREE
        RS+SPR ++++ R RER D RDRD  GNG RS +R +R+DRD GGRRRHGSP+RSRSP  VREGSEERRARIEQWNRER+E
Subjt:  RSLSPRNRKDYDR-RER-DYRDRDYRGNG-RSKERFDRYDRD-GGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAACACTTGGCCTCAATTTTTGGCACCGAGAAGGACCGCGTCAACTGCCCCTTCTATTTCAAGATCGGCGCCTGCCGTCATGGAGATCGCTGCTCTCGCCTCCA
CAACCGCCCCACTATTTCCCCGACTCTTCTCTTATCGAACATGTACCAGCGTCCGGACATGATCACCCCTGGTGTCGATGCTCAGGGTCAGCCCATAGATCCCCGCAAGA
TTCAGGAACACTTTGAGGATTTCTACGAAGACATTTACGAGGAACTCGGTAAGTTCGGTGAGATCGAGAGTCTCAACGTCTGTGATAATCTCGCCGACCACATGATTGGC
AATGTCTACGTTCAGTTTAGGGAGGAGGACCAGGCTGCTGCCGCACTCCAAGCGTTGCAAGGCCGGTTCTACTCTGGTCGACCCATTATCGCTGATTTCTCTCCGGTGAC
TGATTTTCGCGAGGCCACGTGCCGCCAATACGAGGAGAATAATTGTAATCGAGGCGGATATTGTAATTTTATGCATGTTAAGATGATTGGGAAGGATTTGAGGAGGAAGC
TGTTCGGCAGGTACCGTGGATATAGACGGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGCAACCGTAAGGACTACGATAGGCGTGAGAGGGATTATAGAGATCGTGAC
TATCGCGGAAACGGACGGAGCAAGGAGCGGTTCGATAGGTATGATAGGGATGGGGGAAGGAGAAGGCATGGTAGCCCGAGACGAAGCAGAAGCCCTGTGACTGTGAGAGA
AGGGAGCGAAGAGCGCCGAGCCCGGATTGAACAGTGGAACCGAGAAAGGGAGGAGAAGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAACACTTGGCCTCAATTTTTGGCACCGAGAAGGACCGCGTCAACTGCCCCTTCTATTTCAAGATCGGCGCCTGCCGTCATGGAGATCGCTGCTCTCGCCTCCA
CAACCGCCCCACTATTTCCCCGACTCTTCTCTTATCGAACATGTACCAGCGTCCGGACATGATCACCCCTGGTGTCGATGCTCAGGGTCAGCCCATAGATCCCCGCAAGA
TTCAGGAACACTTTGAGGATTTCTACGAAGACATTTACGAGGAACTCGGTAAGTTCGGTGAGATCGAGAGTCTCAACGTCTGTGATAATCTCGCCGACCACATGATTGGC
AATGTCTACGTTCAGTTTAGGGAGGAGGACCAGGCTGCTGCCGCACTCCAAGCGTTGCAAGGCCGGTTCTACTCTGGTCGACCCATTATCGCTGATTTCTCTCCGGTGAC
TGATTTTCGCGAGGCCACGTGCCGCCAATACGAGGAGAATAATTGTAATCGAGGCGGATATTGTAATTTTATGCATGTTAAGATGATTGGGAAGGATTTGAGGAGGAAGC
TGTTCGGCAGGTACCGTGGATATAGACGGAGCCGGAGCAGGAGTAGAAGTTTGAGTCCGCGCAACCGTAAGGACTACGATAGGCGTGAGAGGGATTATAGAGATCGTGAC
TATCGCGGAAACGGACGGAGCAAGGAGCGGTTCGATAGGTATGATAGGGATGGGGGAAGGAGAAGGCATGGTAGCCCGAGACGAAGCAGAAGCCCTGTGACTGTGAGAGA
AGGGAGCGAAGAGCGCCGAGCCCGGATTGAACAGTGGAACCGAGAAAGGGAGGAGAAGCAGTGA
Protein sequenceShow/hide protein sequence
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITPGVDAQGQPIDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIG
NVYVQFREEDQAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRYRGYRRSRSRSRSLSPRNRKDYDRRERDYRDRD
YRGNGRSKERFDRYDRDGGRRRHGSPRRSRSPVTVREGSEERRARIEQWNREREEKQ