; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr017931 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr017931
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationtig00153057:627340..627798
RNA-Seq ExpressionSgr017931
SyntenySgr017931
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19448.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]8.4e-3357.38Show/hide
Query:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS
        M  +R+VW HNL QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE   Y DLKFN+N + ILQ GLT+ DE+ +VG++W F FSDFDE T   S TS
Subjt:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS

Query:  VEFLKNT-GLDFEKLRTEGIAS
        ++FLKN  G +F+K + +GI S
Subjt:  VEFLKNT-GLDFEKLRTEGIAS

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]4.9e-3356.59Show/hide
Query:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS
        M  VR+VW HN  QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE  FY DLKFN+N + ILQLGLT+ DE+ +VG++W F FSDFDE T   S TS
Subjt:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS

Query:  VEFLKN-TGLDFEKLRTEGIASGSSGGSF
        +++LKN  G +F+K R +GI S     +F
Subjt:  VEFLKN-TGLDFEKLRTEGIASGSSGGSF

XP_022146113.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]2.4e-3257.76Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEF
        +REVWS N   ELA L+ CL+ +P++ IDTEFPGFIR +P GA E + YDD +FNVN+  ++QLGLT +DE GN+G TW+FNFSDFD     H+ +SV F
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEF

Query:  LKNTGLDFEKLRTEGI
        LK  GLDF+KL+  GI
Subjt:  LKNTGLDFEKLRTEGI

XP_022975238.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]1.1e-3255.56Show/hide
Query:  REVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE-F
        R+VWSHNL +E+ ++  CLS+FP+VA+DTEFPGF+RC+P+G  + +FY  L+FNVNQ++ILQLGLT+ DE+G +GMTW+FNF DFD+ + +    S++ F
Subjt:  REVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE-F

Query:  LKNTGLDFEKLRTEGIA
        LKN G +F  LR+ GI+
Subjt:  LKNTGLDFEKLRTEGIA

XP_038890962.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]5.4e-4066.12Show/hide
Query:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS
        M LVR+VWSHNL +ELA+ +  LS FPV+ IDTEFPGFIR +PRGAP+   Y DLKFN+N + ILQLGLT+ DE+GNVGMTW+F FSDFDE T + + TS
Subjt:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS

Query:  VEFLKNTGLDFEKLRTEGIAS
        ++FLKN GLDF+K R EGI S
Subjt:  VEFLKNTGLDFEKLRTEGIAS

TrEMBL top hitse value%identityAlignment
A0A1S3BY95 Poly(A)-specific ribonuclease2.4e-3356.59Show/hide
Query:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS
        M  VR+VW HN  QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE  FY DLKFN+N + ILQLGLT+ DE+ +VG++W F FSDFDE T   S TS
Subjt:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS

Query:  VEFLKN-TGLDFEKLRTEGIASGSSGGSF
        +++LKN  G +F+K R +GI S     +F
Subjt:  VEFLKN-TGLDFEKLRTEGIASGSSGGSF

A0A5D3D333 Poly(A)-specific ribonuclease2.4e-3356.59Show/hide
Query:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS
        M  VR+VW HN  QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE  FY DLKFN+N + ILQLGLT+ DE+ +VG++W F FSDFDE T   S TS
Subjt:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS

Query:  VEFLKN-TGLDFEKLRTEGIASGSSGGSF
        +++LKN  G +F+K R +GI S     +F
Subjt:  VEFLKN-TGLDFEKLRTEGIASGSSGGSF

A0A5D3D792 Poly(A)-specific ribonuclease4.1e-3357.38Show/hide
Query:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS
        M  +R+VW HNL QELA+L+  L  FPV+A+DTEFPGF+R +PRGAPE   Y DLKFN+N + ILQ GLT+ DE+ +VG++W F FSDFDE T   S TS
Subjt:  MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTS

Query:  VEFLKNT-GLDFEKLRTEGIAS
        ++FLKN  G +F+K + +GI S
Subjt:  VEFLKNT-GLDFEKLRTEGIAS

A0A6J1CXP9 Poly(A)-specific ribonuclease1.2e-3257.76Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEF
        +REVWS N   ELA L+ CL+ +P++ IDTEFPGFIR +P GA E + YDD +FNVN+  ++QLGLT +DE GN+G TW+FNFSDFD     H+ +SV F
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEF

Query:  LKNTGLDFEKLRTEGI
        LK  GLDF+KL+  GI
Subjt:  LKNTGLDFEKLRTEGI

A0A6J1IIN1 Poly(A)-specific ribonuclease5.3e-3355.56Show/hide
Query:  REVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE-F
        R+VWSHNL +E+ ++  CLS+FP+VA+DTEFPGF+RC+P+G  + +FY  L+FNVNQ++ILQLGLT+ DE+G +GMTW+FNF DFD+ + +    S++ F
Subjt:  REVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE-F

Query:  LKNTGLDFEKLRTEGIA
        LKN G +F  LR+ GI+
Subjt:  LKNTGLDFEKLRTEGIA

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 52.9e-2042.11Show/hide
Query:  EVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLK
        EVW  N + E+  +  CL     +AIDTEFPG ++ +P  A +   Y D+KFNV+   ++QLGLT+  +   +  TW+ N SDF+E+ ++ +  S+ FLK
Subjt:  EVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLK

Query:  NTGLDFEKLRTEGI
        N GLD +K+R EGI
Subjt:  NTGLDFEKLRTEGI

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.9e-2036.43Show/hide
Query:  LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFI-RCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNV---------GMTWQFNFSDFDET
        + REVW+ NL  E  ++   + D+P +++DTEFPG I +   R       Y  LK NV+ ++++Q+GLT++D +GN+         G  W+FNF DFD  
Subjt:  LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFI-RCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNV---------GMTWQFNFSDFDET

Query:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS
           H+  S+E L+  G+DFE+   +G+ S
Subjt:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS

Q9S9P2 Probable CCR4-associated factor 1 homolog 21.2e-2139.69Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDLKFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSD
        +REVW+HNL QE+A+++  + DFP VA+DTEFPG     +  +P   P        YD LK NVN + ++QLGLT++DE GN+          WQFNF +
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDLKFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSD

Query:  FDETTAVHSRTSVEFLKNTGLDFEKLRTEGI
        F+  + + +  S+E L+ + +D EK    G+
Subjt:  FDETTAVHSRTSVEFLKNTGLDFEKLRTEGI

Q9SHJ0 Probable CCR4-associated factor 1 homolog 13.8e-2036.75Show/hide
Query:  LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE
        L R VW  N+ +E+A +  CL  FP++A DTE+PG I  +   +   + Y  +K NV    ++Q G T+ +  G +G  W+ NFS+F + +   +  S+E
Subjt:  LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVE

Query:  FLKNTGLDFEKLRTEGI
        FL+  GLD +K+R EG+
Subjt:  FLKNTGLDFEKLRTEGI

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.2e-2141.86Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQ---FYDDLKFNVNQMTILQLGLTVADESGNVG--------MTWQFNFSDFDET
        +REVW+ NL  E+A++   + DFP VA+DTEFPG + C P G  +      Y+ LK NVN + ++QLGLT +DE GN+           WQFNF +FD  
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQ---FYDDLKFNVNQMTILQLGLTVADESGNVG--------MTWQFNFSDFDET

Query:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS
        + +++  S+E L+ +G+DF K    GI S
Subjt:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.4e-2339.69Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDLKFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSD
        +REVW+HNL QE+A+++  + DFP VA+DTEFPG     +  +P   P        YD LK NVN + ++QLGLT++DE GN+          WQFNF +
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDLKFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSD

Query:  FDETTAVHSRTSVEFLKNTGLDFEKLRTEGI
        F+  + + +  S+E L+ + +D EK    G+
Subjt:  FDETTAVHSRTSVEFLKNTGLDFEKLRTEGI

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.4e-2339.69Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDLKFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSD
        +REVW+HNL QE+A+++  + DFP VA+DTEFPG     +  +P   P        YD LK NVN + ++QLGLT++DE GN+          WQFNF +
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGF----IRCSPRGAPEG----QFYDDLKFNVNQMTILQLGLTVADESGNV-------GMTWQFNFSD

Query:  FDETTAVHSRTSVEFLKNTGLDFEKLRTEGI
        F+  + + +  S+E L+ + +D EK    G+
Subjt:  FDETTAVHSRTSVEFLKNTGLDFEKLRTEGI

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-2142.11Show/hide
Query:  EVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLK
        EVW  N + E+  +  CL     +AIDTEFPG ++ +P  A +   Y D+KFNV+   ++QLGLT+  +   +  TW+ N SDF+E+ ++ +  S+ FLK
Subjt:  EVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLK

Query:  NTGLDFEKLRTEGI
        N GLD +K+R EGI
Subjt:  NTGLDFEKLRTEGI

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.4e-2341.86Show/hide
Query:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQ---FYDDLKFNVNQMTILQLGLTVADESGNVG--------MTWQFNFSDFDET
        +REVW+ NL  E+A++   + DFP VA+DTEFPG + C P G  +      Y+ LK NVN + ++QLGLT +DE GN+           WQFNF +FD  
Subjt:  VREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQ---FYDDLKFNVNQMTILQLGLTVADESGNVG--------MTWQFNFSDFDET

Query:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS
        + +++  S+E L+ +G+DF K    GI S
Subjt:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-2136.43Show/hide
Query:  LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFI-RCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNV---------GMTWQFNFSDFDET
        + REVW+ NL  E  ++   + D+P +++DTEFPG I +   R       Y  LK NV+ ++++Q+GLT++D +GN+         G  W+FNF DFD  
Subjt:  LVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFI-RCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNV---------GMTWQFNFSDFDET

Query:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS
           H+  S+E L+  G+DFE+   +G+ S
Subjt:  TAVHSRTSVEFLKNTGLDFEKLRTEGIAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCGTTCGAGAAGTTTGGTCCCATAATCTCCGGCAAGAGCTCGCCGTTCTCGACGCCTGTCTTTCCGACTTTCCGGTGGTCGCCATTGACACCGAGTTCCCGGG
GTTTATCAGATGCAGCCCGAGAGGGGCCCCGGAGGGACAGTTCTACGATGATCTTAAGTTCAATGTGAACCAGATGACGATTCTCCAGTTGGGCCTCACCGTTGCCGACG
AGAGCGGGAACGTCGGCATGACATGGCAGTTCAACTTCAGCGATTTCGATGAAACCACCGCCGTCCACAGCCGAACGTCGGTTGAGTTCTTGAAGAACACAGGCCTGGAT
TTTGAGAAGTTGAGGACAGAAGGAATAGCTTCGGGGAGTTCCGGCGGAAGTTTCTGCCGATCTGTTGCGGCGGTCGGATCGCCAAATGGGTCACCTTCCACGGCTTCTAC
GACGTCGCTTACTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCGTTCGAGAAGTTTGGTCCCATAATCTCCGGCAAGAGCTCGCCGTTCTCGACGCCTGTCTTTCCGACTTTCCGGTGGTCGCCATTGACACCGAGTTCCCGGG
GTTTATCAGATGCAGCCCGAGAGGGGCCCCGGAGGGACAGTTCTACGATGATCTTAAGTTCAATGTGAACCAGATGACGATTCTCCAGTTGGGCCTCACCGTTGCCGACG
AGAGCGGGAACGTCGGCATGACATGGCAGTTCAACTTCAGCGATTTCGATGAAACCACCGCCGTCCACAGCCGAACGTCGGTTGAGTTCTTGAAGAACACAGGCCTGGAT
TTTGAGAAGTTGAGGACAGAAGGAATAGCTTCGGGGAGTTCCGGCGGAAGTTTCTGCCGATCTGTTGCGGCGGTCGGATCGCCAAATGGGTCACCTTCCACGGCTTCTAC
GACGTCGCTTACTTGCTGA
Protein sequenceShow/hide protein sequence
MGLVREVWSHNLRQELAVLDACLSDFPVVAIDTEFPGFIRCSPRGAPEGQFYDDLKFNVNQMTILQLGLTVADESGNVGMTWQFNFSDFDETTAVHSRTSVEFLKNTGLD
FEKLRTEGIASGSSGGSFCRSVAAVGSPNGSPSTASTTSLTC