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Sgr018146 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr018146
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionnuclear pore complex protein NUP62
Genome locationtig00153113:375713..379056
RNA-Seq ExpressionSgr018146
SyntenySgr018146
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR026010 - Nucleoporin NSP1/NUP62


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459731.1 PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo]5.0e-4273.91Show/hide
Query:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
        + E H++   + LL      ER+Y+ E G   +  A    D +  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
Subjt:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS

Query:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        LMWIDEKAEEFSSR+QKLAAT+GPAADRELLGQKFWMS
Subjt:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

XP_022142426.1 nuclear pore complex protein NUP62-like isoform X1 [Momordica charantia]5.0e-4297.85Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSR+QK+AATQGPAADRELLGQKFWMS
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

XP_022142427.1 nuclear pore complex protein NUP62-like isoform X2 [Momordica charantia]5.0e-4297.85Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSR+QK+AATQGPAADRELLGQKFWMS
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

XP_022156652.1 nuclear pore complex protein NUP62, partial [Momordica charantia]3.8e-4273.91Show/hide
Query:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
        + E H++   + LL      ER+Y+ E G   +  A    D +  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
Subjt:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS

Query:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        LMWIDEKAEEFSSR+QK+AATQGPAADRELLGQKFWMS
Subjt:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

XP_038874708.1 nuclear pore complex protein NUP62 [Benincasa hispida]5.0e-4276.34Show/hide
Query:  EIHKRIRGRILLVERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEK
        E+ K ++      ER+Y+ E G   +  A    D +  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEK
Subjt:  EIHKRIRGRILLVERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEK

Query:  AEEFSSRLQKLAATQGPAADRELLGQKFWMS
        AEEFSSR+QKLAAT+GPAADRELLGQKFWMS
Subjt:  AEEFSSRLQKLAATQGPAADRELLGQKFWMS

TrEMBL top hitse value%identityAlignment
A0A1S3CAD4 nuclear pore complex protein NUP622.4e-4273.91Show/hide
Query:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
        + E H++   + LL      ER+Y+ E G   +  A    D +  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
Subjt:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS

Query:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        LMWIDEKAEEFSSR+QKLAAT+GPAADRELLGQKFWMS
Subjt:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

A0A5D3DMB1 Nuclear pore complex protein NUP622.4e-4273.91Show/hide
Query:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
        + E H++   + LL      ER+Y+ E G   +  A    D +  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
Subjt:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS

Query:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        LMWIDEKAEEFSSR+QKLAAT+GPAADRELLGQKFWMS
Subjt:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

A0A6J1CM51 nuclear pore complex protein NUP62-like isoform X12.4e-4297.85Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSR+QK+AATQGPAADRELLGQKFWMS
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

A0A6J1CMQ9 nuclear pore complex protein NUP62-like isoform X22.4e-4297.85Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSR+QK+AATQGPAADRELLGQKFWMS
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

A0A6J1DSI7 nuclear pore complex protein NUP621.9e-4273.91Show/hide
Query:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
        + E H++   + LL      ER+Y+ E G   +  A    D +  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS
Subjt:  MTEIHKRIRGRILL-----VERLYEIE-GNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSS

Query:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        LMWIDEKAEEFSSR+QK+AATQGPAADRELLGQKFWMS
Subjt:  LMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

SwissProt top hitse value%identityAlignment
P17955 Nuclear pore glycoprotein p622.5e-0434.72Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQK
        Y+ AE I+ +L++M + +K II+ LN   GG  D  D   PL  + +ILN  + SL W+D+ +     R+++
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQK

P37198 Nuclear pore glycoprotein p627.4e-0432.88Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKL
        Y+ AE I+ +L++M + +K II+ LN + G   D  D   PL  + +ILN  + SL WID+ +     +++++
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKL

Q63850 Nuclear pore glycoprotein p622.5e-0434.72Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQK
        Y+ AE I+ +L++M + +K II+ LN   GG  D  D   PL  + +ILN  + SL W+D+ +     R+++
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQK

Q7JXF5 Nuclear pore glycoprotein p621.1e-0429.41Show/hide
Query:  LDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQ
        +D++    Y   E ++ +L+QM+E +K II  LN    G+    D   P+  + +ILN  ++SL WI+ ++   S +L+ +   Q
Subjt:  LDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQ

Q8L7F7 Nuclear pore complex protein NUP624.4e-3376.34Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        YEQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ IDGM+PLD VVRILNNQLSSLMWIDEKAEEFSSR+QK+ A QG   DREL+  K WMS
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS

Arabidopsis top hitse value%identityAlignment
AT2G45000.1 structural constituent of nuclear pore3.1e-3476.34Show/hide
Query:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS
        YEQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ IDGM+PLD VVRILNNQLSSLMWIDEKAEEFSSR+QK+ A QG   DREL+  K WMS
Subjt:  YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQKLAATQGPAADRELLGQKFWMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGATCCATAAGAGAATTCGTGGAAGAATTTTATTGGTTGAACGTCTGTATGAGATCGAAGGCAATAAGTTCAACATTTCAGCACCTTTGGATGTTGATCTGCT
TGACTGGTATGAGCAAGCTGAATATATAGAGCGGGAACTAGAGCAGATGACCGAACAGATCAAATCAATTATCCAGACCCTAAATGCCAACCAGGGAGGAGAACTTGATG
TGATTGATGGGATGACACCGTTAGATGCAGTTGTCCGAATTTTGAACAACCAATTAAGTTCTTTAATGTGGATCGATGAAAAGGCGGAAGAGTTTTCTTCACGTCTTCAG
AAGCTTGCAGCAACGCAGGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTTTGGATGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAGATCCATAAGAGAATTCGTGGAAGAATTTTATTGGTTGAACGTCTGTATGAGATCGAAGGCAATAAGTTCAACATTTCAGCACCTTTGGATGTTGATCTGCT
TGACTGGTATGAGCAAGCTGAATATATAGAGCGGGAACTAGAGCAGATGACCGAACAGATCAAATCAATTATCCAGACCCTAAATGCCAACCAGGGAGGAGAACTTGATG
TGATTGATGGGATGACACCGTTAGATGCAGTTGTCCGAATTTTGAACAACCAATTAAGTTCTTTAATGTGGATCGATGAAAAGGCGGAAGAGTTTTCTTCACGTCTTCAG
AAGCTTGCAGCAACGCAGGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTTTGGATGTCTTGA
Protein sequenceShow/hide protein sequence
MTEIHKRIRGRILLVERLYEIEGNKFNISAPLDVDLLDWYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRLQ
KLAATQGPAADRELLGQKFWMS