CuGenDBv2

Gene ID	Sgr018216
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	mediator of RNA polymerase II transcription subunit 27
Genome location	tig00153145:274995..278059
RNA-Seq Expression	Sgr018216
Synteny	Sgr018216
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0016592 - mediator complex (cellular component) GO:0003713 - transcription coactivator activity (molecular function)
InterPro domains	IPR021627 - Mediator complex, subunit Med27

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022151438.1 mediator of RNA polymerase II transcription subunit 27 [Momordica charantia]

1.0e-221

92.42

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQQPAQG TATVSPNTAAPHSGGSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTA PHQSTKPLHLFQKED SMRQHL+DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP LKKPCFSHGVTEIKQ+EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        E RTL DILTCMEKEVPDLKIFTYERLDWLKQA AL SQAN+NS+GALKEHNYHSPRM PGSL A++KDKV+VIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FF+PDERGSYVHARGFS HHLFRHVTEHAATVLQYFLGIQ KAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTS++ SAVP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSE
        ISSLK+QR DPVQAFHIGCFSE
Subjt:  ISSLKNQRLDPVQAFHIGCFSE

XP_022940393.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita moschata]

3.1e-218

91.02

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT++KQEEL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +S +L DILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENS+GALKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISS VP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSEL
        ++SLK+Q+LD VQAFHIGCF+EL
Subjt:  ISSLKNQRLDPVQAFHIGCFSEL

XP_023005694.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita maxima]

9.0e-218

90.78

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT++KQEEL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +S +L DILTCMEKEVPDLKIFTYERLDWLKQAS LPSQANENS+G LKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSEL
        ++SLK+Q+LD VQAFHIGCF+EL
Subjt:  ISSLKNQRLDPVQAFHIGCFSEL

XP_023539656.1 mediator of RNA polymerase II transcription subunit 27 [Cucurbita pepo subsp. pepo]

3.1e-218

91.25

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEP  KKPCFSHGVT++KQEEL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +S +L DILTC+EKEVPDLKIFTYERLDWLKQASAL SQANENS+GALKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSEL
        ++SLK+Q+LD VQAFHIGCF+EL
Subjt:  ISSLKNQRLDPVQAFHIGCFSEL

XP_038904949.1 mediator of RNA polymerase II transcription subunit 27 [Benincasa hispida]

1.3e-216

90.5

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Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQQPAQG TATVSPNTA PHS  SAD+APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DENGSN EP LKKPCFSHGVT++KQ EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +SR+L +ILTCMEKEVP+LKIFTYERLDWLKQASALPSQANENS+G LKEH+YHSPRMSPGSLGAT  DK  VIEL+IPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYFLG QAKAALYPLLLWICSYQNLFSKACSKCG+LLSVNKQSDLLLPPA+RPYKQFC SK SS+VP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFS
        I+SLK+Q+LD VQAFHI CFS
Subjt:  ISSLKNQRLDPVQAFHIGCFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGT1 Uncharacterized protein

2.8e-209

87.91

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MR  QQP+QG TATVSP+T   HS  S D+APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQS+KPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP LKKPCFSHGVT++KQ EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +SR+L DIL+CMEKEVP+LKIFTYERLDWLKQASALPSQANENS+GALKEH+YHSPRMSPG+LGAT  DK  VIELIIPSVFRAVVSLHPVGSVEPDA+A
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS +HLFRHVTEHAATVLQYFLG Q KAALYPLLLWICSYQNLFSKACSKCGR LSVNKQSDLLLPPA+RPYKQFC SK SS VP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSE
        I+SLK+Q+LD VQAFHI CFSE
Subjt:  ISSLKNQRLDPVQAFHIGCFSE

A0A1S3B7L6 mediator of RNA polymerase II transcription subunit 27

9.7e-210

87.68

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MR  QQP+QG TATVSPNT   HS  SAD+APPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQS+KPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHL+DEN SN EP LKKPCFSHGVT++KQ EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +SR+L DIL+C+EKEVP+LKIFTYERLDWLKQASALPSQANENS+GALKEH+YHSPRMSPG+LGAT  DK  VIELIIPSVFRAVVSLHP+GSVEPDA+A
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS +H+FRHVTEHAATVLQYFLG Q KAALYPLLLWICSYQNLFSKACSKCGR LSVNKQSDLLLPP +RPYKQFC SK SSAVP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSE
        I+SLK+Q+LD VQAFHI CFSE
Subjt:  ISSLKNQRLDPVQAFHIGCFSE

A0A6J1DC62 mediator of RNA polymerase II transcription subunit 27

5.0e-222

92.42

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQQPAQG TATVSPNTAAPHSGGSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTA PHQSTKPLHLFQKED SMRQHL+DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDE+  N+EP LKKPCFSHGVTEIKQ+EL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        E RTL DILTCMEKEVPDLKIFTYERLDWLKQA AL SQAN+NS+GALKEHNYHSPRM PGSL A++KDKV+VIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FF+PDERGSYVHARGFS HHLFRHVTEHAATVLQYFLGIQ KAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTS++ SAVP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSE
        ISSLK+QR DPVQAFHIGCFSE
Subjt:  ISSLKNQRLDPVQAFHIGCFSE

A0A6J1FP59 mediator of RNA polymerase II transcription subunit 27

1.5e-218

91.02

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT++KQEEL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +S +L DILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENS+GALKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISS VP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSEL
        ++SLK+Q+LD VQAFHIGCF+EL
Subjt:  ISSLKNQRLDPVQAFHIGCFSEL

A0A6J1KZZ9 mediator of RNA polymerase II transcription subunit 27

4.3e-218

90.78

Show/hide

Query:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ
        MRQTQ PAQG TATVSP T   HS GSA+EAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHL DLRAVG+Q
Subjt:  MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQ

Query:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY
        LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLD+ENGSN+EP  KKPCFSHGVT++KQEEL 
Subjt:  LEESGVLSESLLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELY

Query:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA
        +S +L DILTCMEKEVPDLKIFTYERLDWLKQAS LPSQANENS+G LKEHNYHSPRMSP SL AT+ DK AVIELIIPSVFRAVVSLHPVGSVEPDAVA
Subjt:  ESRTLPDILTCMEKEVPDLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVA

Query:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
        FFSPDERGS+VHARGFS HHLFRHVTEHAATVLQYF+GIQAKAAL+PLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP
Subjt:  FFSPDERGSYVHARGFSTHHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVP

Query:  ISSLKNQRLDPVQAFHIGCFSEL
        ++SLK+Q+LD VQAFHIGCF+EL
Subjt:  ISSLKNQRLDPVQAFHIGCFSEL

SwissProt top hits

e value

%identity

Alignment

Q8RWM3 Mediator of RNA polymerase II transcription subunit 27

3.1e-128

60.2

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Query:  NTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNS
        N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL LF +EDASMRQHLQDLR +G++LEESGVL+ESL SRSNS
Subjt:  NTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNS

Query:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVP
        WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH + E  +EE  + +TLPDI + +EK VP
Subjt:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVP

Query:  DLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFS
         +K+ TY RL+WLK+A++LP   +++   A K     S ++  G L     DK+AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GSY+HARGFS
Subjt:  DLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFS

Query:  THHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHI
         +H+++H+TEHAAT LQYFLG     ALY LLLWICS++++FSK C+KCGRLL+++K+S L+LPP  R Y++         +P++      LD  +A+H 
Subjt:  THHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHI

Query:  GC
         C
Subjt:  GC

Arabidopsis top hits

e value

%identity

Alignment

AT3G09180.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).

2.2e-129

60.2

Show/hide

Query:  NTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNS
        N A   +  S  +APPKQVA AM+RL  AAR+IADIRLGADR+LEA+ V +QP  +  PL LF +EDASMRQHLQDLR +G++LEESGVL+ESL SRSNS
Subjt:  NTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSESLLSRSNS

Query:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVP
        WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPH+DD  G  +EP  KK   SH + E  +EE  + +TLPDI + +EK VP
Subjt:  WGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVP

Query:  DLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFS
         +K+ TY RL+WLK+A++LP   +++   A K     S ++  G L     DK+AVIEL  PS+FRA+VSL P GSV+PDAVAFFSPDE GSY+HARGFS
Subjt:  DLKIFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFS

Query:  THHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHI
         +H+++H+TEHAAT LQYFLG     ALY LLLWICS++++FSK C+KCGRLL+++K+S L+LPP  R Y++         +P++      LD  +A+H 
Subjt:  THHLFRHVTEHAATVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHI

Query:  GC
         C
Subjt:  GC

Sequences

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CDS sequence

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ATGCGCCAGACGCAGCAGCCAGCGCAGGGCCCGACTGCGACGGTGAGCCCTAATACTGCTGCGCCTCATTCCGGCGGCTCTGCAGACGAGGCGCCGCCGAAGCAGGTAGC
GCTGGCCATGGATAGACTCGGCCACGCCGCACGCCTCATCGCCGATATTAGGCTCGGCGCCGATCGTCTTCTCGAAGCCTTATGCGTCACTGCACAGCCTCATCAAAGCA
CCAAGCCTCTGCACTTGTTTCAGAAAGAGGATGCTTCGATGCGGCAACACCTCCAAGACCTTCGTGCAGTTGGAAGGCAGCTTGAAGAGTCTGGCGTTCTCAGTGAATCT
CTTCTTTCACGAAGTAATTCTTGGGGTCTACATATGCCTTTAGTGTGCCCTGACGGAGCAGTGGTTGCTTATGCTTGGAAACGTCAACTAGCTGGCCAGGCCGGTGCATC
CGCAGTTGACCGGACCAGGTTAGCTCTAAAGGCCTTCACTGACCAGAAAAGACGGTTTTTCCCTCATCTTGACGATGAAAATGGGTCGAATATTGAGCCTGTTCTGAAGA
AGCCTTGTTTTTCTCATGGAGTGACAGAAATTAAACAAGAGGAGCTTTATGAATCTAGAACACTGCCAGATATTCTAACATGTATGGAAAAGGAAGTGCCAGATCTTAAG
ATTTTCACTTACGAGCGATTAGACTGGTTGAAACAAGCTTCAGCACTTCCCTCACAAGCAAATGAGAATTCCATGGGAGCATTGAAAGAACATAACTATCATAGTCCTAG
GATGAGCCCTGGATCGCTTGGTGCTACTGCCAAAGATAAAGTTGCTGTAATTGAGTTGATCATCCCTTCTGTCTTTAGAGCTGTAGTATCACTGCATCCAGTTGGTTCTG
TTGAACCAGATGCTGTAGCTTTCTTTTCTCCTGATGAGAGAGGCAGCTATGTACATGCCAGGGGTTTTTCAACTCATCATTTGTTTAGACACGTGACGGAGCATGCTGCC
ACTGTGCTGCAGTATTTTCTTGGAATTCAAGCAAAAGCAGCTCTATATCCTTTATTGCTTTGGATCTGCAGCTACCAAAATTTATTTTCAAAAGCTTGCAGTAAATGCGG
ACGGCTACTATCAGTAAACAAACAGTCAGATTTACTGTTACCTCCTGCAATTCGCCCTTACAAGCAGTTTTGTACATCAAAAATCTCATCGGCTGTGCCCATATCCTCAT
TGAAAAACCAGCGGTTGGATCCTGTTCAAGCTTTCCACATCGGTTGCTTCTCAGAACTATAG

mRNA sequence

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Protein sequence

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MRQTQQPAQGPTATVSPNTAAPHSGGSADEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALCVTAQPHQSTKPLHLFQKEDASMRQHLQDLRAVGRQLEESGVLSES
LLSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDENGSNIEPVLKKPCFSHGVTEIKQEELYESRTLPDILTCMEKEVPDLK
IFTYERLDWLKQASALPSQANENSMGALKEHNYHSPRMSPGSLGATAKDKVAVIELIIPSVFRAVVSLHPVGSVEPDAVAFFSPDERGSYVHARGFSTHHLFRHVTEHAA
TVLQYFLGIQAKAALYPLLLWICSYQNLFSKACSKCGRLLSVNKQSDLLLPPAIRPYKQFCTSKISSAVPISSLKNQRLDPVQAFHIGCFSEL

Sgr018216 (gene) of Monk fruit (Qingpiguo) v1 genome