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Sgr018356 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr018356
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA repair protein XRCC2 homolog
Genome locationtig00153197:408383..410205
RNA-Seq ExpressionSgr018356
SyntenySgr018356
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0005657 - replication fork (cellular component)
GO:0033063 - Rad51B-Rad51C-Rad51D-XRCC2 complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013632 - DNA recombination and repair protein Rad51-like, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR030547 - DNA repair protein XRCC2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155175.1 DNA repair protein XRCC2 homolog [Momordica charantia]2.0e-5080.15Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MALS+WI GDE+AAEMLARV+K+RPSLFVPPLHR+PLR GNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVF+DLDCRLD+SRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGNEQQRKRNL----ALIQICLWR
        KLRILEANGN     ++     AL   C+ R
Subjt:  KLRILEANGNEQQRKRNL----ALIQICLWR

XP_022998310.1 DNA repair protein XRCC2 homolog isoform X1 [Cucurbita maxima]3.8e-4990.91Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDESAAEML RV+KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NGN
Subjt:  KLRILEANGN

XP_022998340.1 DNA repair protein XRCC2 homolog isoform X3 [Cucurbita maxima]3.8e-4990.91Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDESAAEML RV+KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NGN
Subjt:  KLRILEANGN

XP_023550059.1 DNA repair protein XRCC2 homolog isoform X1 [Cucurbita pepo subsp. pepo]8.5e-4990Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDE+AAEML RV+KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NGN
Subjt:  KLRILEANGN

XP_023550300.1 DNA repair protein XRCC2 homolog isoform X3 [Cucurbita pepo subsp. pepo]8.5e-4990Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDE+AAEML RV+KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NGN
Subjt:  KLRILEANGN

TrEMBL top hitse value%identityAlignment
A0A6J1DLP4 DNA repair protein XRCC2 homolog9.8e-5180.15Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MALS+WI GDE+AAEMLARV+K+RPSLFVPPLHR+PLR GNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVF+DLDCRLD+SRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGNEQQRKRNL----ALIQICLWR
        KLRILEANGN     ++     AL   C+ R
Subjt:  KLRILEANGNEQQRKRNL----ALIQICLWR

A0A6J1GYJ6 DNA repair protein XRCC2 homolog isoform X34.5e-4889.09Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDE+AAEML RV KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NG+
Subjt:  KLRILEANGN

A0A6J1GZX5 DNA repair protein XRCC2 homolog isoform X14.5e-4889.09Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDE+AAEML RV KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NG+
Subjt:  KLRILEANGN

A0A6J1KC54 DNA repair protein XRCC2 homolog isoform X11.8e-4990.91Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDESAAEML RV+KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NGN
Subjt:  KLRILEANGN

A0A6J1KC81 DNA repair protein XRCC2 homolog isoform X31.8e-4990.91Show/hide
Query:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL
        MAL +WIDGDESAAEML RV+KER SL VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNG+RYGGLECSVVF+DLDCRLDISRLSQVL
Subjt:  MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVL

Query:  KLRILEANGN
        KLRILE NGN
Subjt:  KLRILEANGN

SwissProt top hitse value%identityAlignment
O43543 DNA repair protein XRCC24.4e-0836.45Show/hide
Query:  ESAAEMLARV-----MKE-RPSLFV---PPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLK
        ES  E+LAR+     +KE  P+LF     P+H      G+++E  GP G+ KT++L      CILPK       GGLE  V+F+D D   D+ RL  +L+
Subjt:  ESAAEMLARV-----MKE-RPSLFV---PPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLK

Query:  LRILEAN
         R+ +++
Subjt:  LRILEAN

Q682D3 DNA repair protein XRCC2 homolog6.5e-3668.93Show/hide
Query:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL
        WI GDE+A +ML+RV+K+R  L +PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNG+ YGGL   V+FLDLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL

Query:  EAN
        +AN
Subjt:  EAN

Q9CX47 DNA repair protein XRCC21.3e-0736.45Show/hide
Query:  ESAAEMLARV-----MKE-RPSLFV---PPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLK
        ES  E+LAR+     +KE  P+LF     P+H      G++ E  GP G+ KT++L      CILPK       GGL+  V+F+D D   D+ RL  VL+
Subjt:  ESAAEMLARV-----MKE-RPSLFV---PPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLK

Query:  LRILEAN
         R+ +++
Subjt:  LRILEAN

Arabidopsis top hitse value%identityAlignment
AT5G64520.1 homolog of X-ray repair cross complementing 2 (XRCC2)4.6e-3768.93Show/hide
Query:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL
        WI GDE+A +ML+RV+K+R  L +PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNG+ YGGL   V+FLDLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL

Query:  EAN
        +AN
Subjt:  EAN

AT5G64520.2 homolog of X-ray repair cross complementing 2 (XRCC2)4.6e-3768.93Show/hide
Query:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL
        WI GDE+A +ML+RV+K+R  L +PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNG+ YGGL   V+FLDLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL

Query:  EAN
        +AN
Subjt:  EAN

AT5G64520.3 homolog of X-ray repair cross complementing 2 (XRCC2)4.6e-3768.93Show/hide
Query:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL
        WI GDE+A +ML+RV+K+R  L +PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNG+ YGGL   V+FLDLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRIL

Query:  EAN
        +AN
Subjt:  EAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAGCAAGTGGATCGACGGAGATGAGAGCGCGGCGGAGATGCTTGCCAGAGTTATGAAAGAGCGGCCCTCCTTGTTTGTTCCGCCTCTCCACAGGGTTCCTCT
CCGGGTCGGGAACGTGGTCGAACTTGTTGGACCCTCTGGTTCTGCCAAGACCCAGATCTTAATACAGGCTGCAGTTAATTGCATTCTTCCCAAGGAGTGGAATGGGGTGC
GCTATGGAGGCTTGGAGTGTTCAGTGGTGTTCCTCGACTTGGATTGTCGTCTTGACATCTCAAGGCTTTCCCAAGTTCTGAAGCTTCGAATTTTGGAAGCCAATGGCAAT
GAGCAGCAAAGGAAAAGGAACCTTGCTTTGATTCAGATATGCCTATGGAGAATTCCCAAGAAAGGTCGGCAATCTGGCGTTCCATCGTCATTAGAAAGTACGGTTCTGAA
GGCAATGGTCGGAAATGGGGAGAGATTCAGTTTTTTGGCAAGGGGTATGGACAAGAACGTCTTTCCCGACGGGTTTTTTTCTCTCCTCTATTCTTTATCAACTGTTCGAA
GTTCAAATGTTGCAGATGTTTTCCGTTGCAACGTTGGGTCTTGGTCCCTTGATTTTAGGAAGACCTTCAACGAGACAGAAGAAGAGGAGAGATCTTTCGTCGATTTCTTG
CTGGTGGAAGAAAGTGTGCTGCCGACCAATACAGTGAAGTTCATCTGGAAGTCAAAGGCACGCAATGAAATCCATTCTTTGCTTGGTCCATTATTACTTGGAAGATCAAC
ATCAATGGGAGGACCAAGCTTCCCTTCCATGGTTCTCCACTCAGAAAGACATGTGATGAGTGGAAGTGCCGAGGAAGATCTAGATCATTTGTTTGTTCACTGTTCCTTCA
AGTTTATGGGGTTCCTTATTTTTGAAGGTTGGACATGCCTATGGGTCCCCTCCCCTGTTTTGTGCATCCTTTTGGGAACTTGGAAAGAGAGAAGTAGAATGATTTTTAAG
GATAGGGACAGGGGAGTTAAGAAAGTATTGAATTACATCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCAGCAAGTGGATCGACGGAGATGAGAGCGCGGCGGAGATGCTTGCCAGAGTTATGAAAGAGCGGCCCTCCTTGTTTGTTCCGCCTCTCCACAGGGTTCCTCT
CCGGGTCGGGAACGTGGTCGAACTTGTTGGACCCTCTGGTTCTGCCAAGACCCAGATCTTAATACAGGCTGCAGTTAATTGCATTCTTCCCAAGGAGTGGAATGGGGTGC
GCTATGGAGGCTTGGAGTGTTCAGTGGTGTTCCTCGACTTGGATTGTCGTCTTGACATCTCAAGGCTTTCCCAAGTTCTGAAGCTTCGAATTTTGGAAGCCAATGGCAAT
GAGCAGCAAAGGAAAAGGAACCTTGCTTTGATTCAGATATGCCTATGGAGAATTCCCAAGAAAGGTCGGCAATCTGGCGTTCCATCGTCATTAGAAAGTACGGTTCTGAA
GGCAATGGTCGGAAATGGGGAGAGATTCAGTTTTTTGGCAAGGGGTATGGACAAGAACGTCTTTCCCGACGGGTTTTTTTCTCTCCTCTATTCTTTATCAACTGTTCGAA
GTTCAAATGTTGCAGATGTTTTCCGTTGCAACGTTGGGTCTTGGTCCCTTGATTTTAGGAAGACCTTCAACGAGACAGAAGAAGAGGAGAGATCTTTCGTCGATTTCTTG
CTGGTGGAAGAAAGTGTGCTGCCGACCAATACAGTGAAGTTCATCTGGAAGTCAAAGGCACGCAATGAAATCCATTCTTTGCTTGGTCCATTATTACTTGGAAGATCAAC
ATCAATGGGAGGACCAAGCTTCCCTTCCATGGTTCTCCACTCAGAAAGACATGTGATGAGTGGAAGTGCCGAGGAAGATCTAGATCATTTGTTTGTTCACTGTTCCTTCA
AGTTTATGGGGTTCCTTATTTTTGAAGGTTGGACATGCCTATGGGTCCCCTCCCCTGTTTTGTGCATCCTTTTGGGAACTTGGAAAGAGAGAAGTAGAATGATTTTTAAG
GATAGGGACAGGGGAGTTAAGAAAGTATTGAATTACATCTTTTGA
Protein sequenceShow/hide protein sequence
MALSKWIDGDESAAEMLARVMKERPSLFVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGVRYGGLECSVVFLDLDCRLDISRLSQVLKLRILEANGN
EQQRKRNLALIQICLWRIPKKGRQSGVPSSLESTVLKAMVGNGERFSFLARGMDKNVFPDGFFSLLYSLSTVRSSNVADVFRCNVGSWSLDFRKTFNETEEEERSFVDFL
LVEESVLPTNTVKFIWKSKARNEIHSLLGPLLLGRSTSMGGPSFPSMVLHSERHVMSGSAEEDLDHLFVHCSFKFMGFLIFEGWTCLWVPSPVLCILLGTWKERSRMIFK
DRDRGVKKVLNYIF