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Sgr018375 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr018375
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRNase H domain-containing protein
Genome locationtig00153197:807047..807382
RNA-Seq ExpressionSgr018375
SyntenySgr018375
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO69928.1 reverse transcriptase [Corchorus capsularis]2.8e-0942.68Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS
        D FAAE  A ++ I   R  GF D++VE D + +I+KVN + E L P+G + EE+K  +  F    F H+GRDGN VA  ++
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS

OMO77333.1 hypothetical protein CCACVL1_15074 [Corchorus capsularis]1.0e-0839.29Show/hide
Query:  MLDPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS
        +LD FAAE  A L+ I+  ++ GF+D+++E D + +I+K++   + L P+G +IEEIK     F    F H+GRDGN  A  ++
Subjt:  MLDPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS

OMO89542.1 hypothetical protein COLO4_19706 [Corchorus olitorius]7.3e-1034.31Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQS
        D FA EC A L+ I+  R  GFR +++E D + +I+K+N +     P+GA+I ++K  +  F    F+H+GR GNQ A  ++   K  V  +   VW++ 
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQS

Query:  FV
        ++
Subjt:  FV

OMO99660.1 hypothetical protein COLO4_13164 [Corchorus olitorius]6.8e-0834.34Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQ
        D F AEC A L+ I   ++ GF ++++E D +++IRKV  S     P+G +I EIK L   F    F H+ RDGN +A  ++       +T+   +W++
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQ

OMP01552.1 hypothetical protein COLO4_11797 [Corchorus olitorius]6.8e-0837.21Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSK
        D +AAEC A L+  K  R+ GF  +++E D + +I+K N SE  L P+ A+I ++K  ++ F    F H+GR GN+ A  ++   K
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSK

TrEMBL top hitse value%identityAlignment
A0A1R3HHY9 Reverse transcriptase1.3e-0942.68Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS
        D FAAE  A ++ I   R  GF D++VE D + +I+KVN + E L P+G + EE+K  +  F    F H+GRDGN VA  ++
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS

A0A1R3I426 Uncharacterized protein5.1e-0939.29Show/hide
Query:  MLDPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS
        +LD FAAE  A L+ I+  ++ GF+D+++E D + +I+K++   + L P+G +IEEIK     F    F H+GRDGN  A  ++
Subjt:  MLDPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMS

A0A1R3IHV8 RNase H domain-containing protein3.3e-0833.33Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQ
        D F+AEC A ++ +   ++ GFR + +E D +++IRKVN       P+G +I ++K L   F    FLH+ RDGN VA  ++      ++ K   +W++
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQ

A0A1R3J3Y3 RNase H domain-containing protein3.5e-1034.31Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQS
        D FA EC A L+ I+  R  GFR +++E D + +I+K+N +     P+GA+I ++K  +  F    F+H+GR GNQ A  ++   K  V  +   VW++ 
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQS

Query:  FV
        ++
Subjt:  FV

A0A1R3K390 RNase H domain-containing protein3.3e-0837.21Show/hide
Query:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSK
        D +AAEC A L+  K  R+ GF  +++E D + +I+K N SE  L P+ A+I ++K  ++ F    F H+GR GN+ A  ++   K
Subjt:  DPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGATCCATTCGCAGCAGAATGCTCAGCGATATTGGAAGATATTAAAGCTATAAGAAATAAAGGCTTTAGGGATTTGTTGGTTGAATCAGACTGTGTGGCTCTAAT
TAGAAAAGTGAATAGAAGTGAAGAAACTCTCTTCCCCTTGGGAGCTTGGATTGAAGAAATCAAATGCCTTAAAGATGAGTTTTGTGTGAAAGGGTTTCTGCATCTGGGCA
GAGATGGTAATCAAGTAGCTCAGCTCATGAGTTGGCAATCCAAGTTGTGTGTTCAAACAAAGTTTCCATCGGTCTGGTTGCAGAGTTTTGTTTTTGCTGATGTGTCTTTG
TGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGATCCATTCGCAGCAGAATGCTCAGCGATATTGGAAGATATTAAAGCTATAAGAAATAAAGGCTTTAGGGATTTGTTGGTTGAATCAGACTGTGTGGCTCTAAT
TAGAAAAGTGAATAGAAGTGAAGAAACTCTCTTCCCCTTGGGAGCTTGGATTGAAGAAATCAAATGCCTTAAAGATGAGTTTTGTGTGAAAGGGTTTCTGCATCTGGGCA
GAGATGGTAATCAAGTAGCTCAGCTCATGAGTTGGCAATCCAAGTTGTGTGTTCAAACAAAGTTTCCATCGGTCTGGTTGCAGAGTTTTGTTTTTGCTGATGTGTCTTTG
TGTTAG
Protein sequenceShow/hide protein sequence
MLDPFAAECSAILEDIKAIRNKGFRDLLVESDCVALIRKVNRSEETLFPLGAWIEEIKCLKDEFCVKGFLHLGRDGNQVAQLMSWQSKLCVQTKFPSVWLQSFVFADVSL
C