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Sgr018498 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr018498
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationtig00153204:658711..659976
RNA-Seq ExpressionSgr018498
SyntenySgr018498
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037088.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-1050Show/hide
Query:  KVGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM
        +V  +V+LS+N  VGL+  GT K+KGK+ + EV+V+I+CG  HNF+S +L+ +LK+  T T+NYGV+M
Subjt:  KVGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM

KAA0054240.1 disease resistance protein [Cucumis melo var. makuwa]2.0e-1056.72Show/hide
Query:  VVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTYE
        VVELS+N  VGLS  GTMK+KGKI++  V+VLI+CG MHNF+S++L+  L L    T+NYGV +  E
Subjt:  VVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTYE

KAA0060465.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.6e-1052.17Show/hide
Query:  VGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTY
        V  VVELS+N  VGL+  GTMK++GK+   EV+VLI+CG +HNF+S++L+N++KL    TS+YGV++ +
Subjt:  VGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTY

KAA0062156.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-1053.97Show/hide
Query:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM
        +ELS+N  VGL+  GTMK+KGKI + EV++LI+CG  HNF++++L++KLKL    T NYGV++
Subjt:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM

TYK28130.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.4e-1052.38Show/hide
Query:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM
        +ELS+N  VGL+  GTMK+KG++ + EV+VLI+CG  HNF++++L++KL+LL   T NYGV++
Subjt:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM

TrEMBL top hitse value%identityAlignment
A0A5A7UG48 Disease resistance protein9.5e-1156.72Show/hide
Query:  VVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTYE
        VVELS+N  VGLS  GTMK+KGKI++  V+VLI+CG MHNF+S++L+  L L    T+NYGV +  E
Subjt:  VVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTYE

A0A5A7V3M8 Ty3-gypsy retrotransposon protein1.2e-1052.17Show/hide
Query:  VGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTY
        V  VVELS+N  VGL+  GTMK++GK+   EV+VLI+CG +HNF+S++L+N++KL    TS+YGV++ +
Subjt:  VGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTY

A0A5A7V6V6 Ty3/gypsy retrotransposon protein2.1e-1053.97Show/hide
Query:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM
        +ELS+N  VGL+  GTMK+KGKI + EV++LI+CG  HNF++++L++KLKL    T NYGV++
Subjt:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM

A0A5D3C895 Ty3-gypsy retrotransposon protein2.1e-1050Show/hide
Query:  KVGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM
        +V  +V+LS+N  VGL+  GT K+KGK+ + EV+V+I+CG  HNF+S +L+ +LK+  T T+NYGV+M
Subjt:  KVGNVVELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM

A0A5D3DY10 Ty3/gypsy retrotransposon protein2.1e-1052.38Show/hide
Query:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM
        +ELS+N  VGL+  GTMK+KG++ + EV+VLI+CG  HNF++++L++KL+LL   T NYGV++
Subjt:  VELSMNLTVGLSTLGTMKLKGKINQIEVLVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTCACATTGTCACTACTGCATGATACCCAATGGACGATTGCCACCATCATGTCTGAACAAACCATTGGGATGCATAAGGTGATATCTGCTTTGGAGTTGGAAGA
ATTAGTTCAAAAGAGGGAACTTTTGAGGAAGAGGAACAATCATTGGGAGGAAAAACGACAAGCTAGACGATGGGGAGAAAGAGGAGGACTCTTTTGTGGATTCACAAAGA
GCCATGCAACCAAAGTAGGGAATGTCGTTGAACTTTCAATGAATTTGACGGTGGGTCTATCCACGTTGGGAACGATGAAGTTAAAGGGGAAGATTAATCAAATTGAGGTC
CTCGTGCTCATTAACTGTGGGACGATGCATAATTTTGTTTCCCAACAGCTAATTAATAAGTTGAAGCTTCTTTGGACAAATACATCCAACTATGGTGTTGTTATGACTTA
TGAGTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTCACATTGTCACTACTGCATGATACCCAATGGACGATTGCCACCATCATGTCTGAACAAACCATTGGGATGCATAAGGTGATATCTGCTTTGGAGTTGGAAGA
ATTAGTTCAAAAGAGGGAACTTTTGAGGAAGAGGAACAATCATTGGGAGGAAAAACGACAAGCTAGACGATGGGGAGAAAGAGGAGGACTCTTTTGTGGATTCACAAAGA
GCCATGCAACCAAAGTAGGGAATGTCGTTGAACTTTCAATGAATTTGACGGTGGGTCTATCCACGTTGGGAACGATGAAGTTAAAGGGGAAGATTAATCAAATTGAGGTC
CTCGTGCTCATTAACTGTGGGACGATGCATAATTTTGTTTCCCAACAGCTAATTAATAAGTTGAAGCTTCTTTGGACAAATACATCCAACTATGGTGTTGTTATGACTTA
TGAGTGCTAG
Protein sequenceShow/hide protein sequence
MLLTLSLLHDTQWTIATIMSEQTIGMHKVISALELEELVQKRELLRKRNNHWEEKRQARRWGERGGLFCGFTKSHATKVGNVVELSMNLTVGLSTLGTMKLKGKINQIEV
LVLINCGTMHNFVSQQLINKLKLLWTNTSNYGVVMTYEC