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Sgr018870 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr018870
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRibonuclease H
Genome locationtig00153226:1013416..1016706
RNA-Seq ExpressionSgr018870
SyntenySgr018870
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]7.6e-4650.21Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKL--VKFFTAMTSRVNND---------------------------------------------DSK
        +KV+AK+KE RSA L G E K+ ++ +P+L ET KL  + F T    R N D                                             +++
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKL--VKFFTAMTSRVNND---------------------------------------------DSK

Query:  DKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGL
         + D+D  VDFEV + NLEQ++ E E D+S  LLRLIEQEEK TMSYQE L VIN G  E+VKE+RIGTL +  +++ L+ LLHE+KD+FAWSYQDM GL
Subjt:  DKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGL

Query:  DTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        DTEIVTHRLPLK ECKP+RQKLRK+KPEMLIK+K+EVKK
Subjt:  DTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

KAA0046609.1 hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa]7.9e-4360.87Show/hide
Query:  ETLKLVKFFTAMTSRVNNDDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRAN
        +TLK+ K     + +++N +++ + D+D  VDFEV + NLEQ++ E E D+S  LLRLIEQEEK TM YQE L+VIN G  E+VKE+RIGTL +  +++ 
Subjt:  ETLKLVKFFTAMTSRVNNDDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRAN

Query:  LIALLHEYKDMFAWSYQDMPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        L+ALLHE+KD+FAWSYQDMPGLDTEIVTH+LPLK ECK +RQKLRK+KP+ LIK+K+EVKK
Subjt:  LIALLHEYKDMFAWSYQDMPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

KAA0052108.1 uncharacterized protein E6C27_scaffold578G00960 [Cucumis melo var. makuwa]1.2e-4348.1Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLK--LVKFFTAMTSRVNND-------------------------------------------DSKDK
        +KV+ K+KE RSA L GRE K+ ++ +P+L ET K   + F T    R   D                                            ++ +
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLK--LVKFFTAMTSRVNND-------------------------------------------DSKDK

Query:  SDIDLRVDFEVSVYNLEQSVEE-EYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDT
         D+D  VDFEV + NLEQ++EE E D+S  L RLIEQEEK TM YQE L+VIN G  E+VKE++IGTL +  ++ +L+ LLH++ D+FAWSYQDMPGLDT
Subjt:  SDIDLRVDFEVSVYNLEQSVEE-EYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDT

Query:  EIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        EIVTH+LPLK ECKP+RQKLRK+KPEMLIK+K+EVKK
Subjt:  EIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]1.5e-4648.15Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVKFF---------------------------------------------------TAMTSRVNN
        +KV+AK KE RSA L G E K+ ++ +P+L ET KL +                                                     T  + +++N
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVKFF---------------------------------------------------TAMTSRVNN

Query:  DDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQD
         +++ + D+D  VDFEV + NLEQ++ E E D+S  LLRLIEQEEK TM YQE L+VIN G  E+VKE+RIGTL +  +++ L+ LLHE+KD+FAWSYQD
Subjt:  DDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQD

Query:  MPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        MPGLDTEIVTHRLPLK ECKP+RQKLRK+KPEMLIK+K+EVKK
Subjt:  MPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

TYK00092.1 protein NYNRIN-like [Cucumis melo var. makuwa]1.4e-4450Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVK-FFTAMTSRVNNDDSK-----DKSDIDL----------------------------------
        +KV+AK+KE R+A L G E K+ ++ +P+L ET KL +  F     + +N+DS+        +I L                                  
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVK-FFTAMTSRVNNDDSK-----DKSDIDL----------------------------------

Query:  ----RVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDTE
             VDFEV +YNLEQ++ E E D+S  LLRLIEQEEK TM YQE L+VIN G  E+VKE+RIGTL +  +++ L+ALLHE+KD+FAWSYQDMP LDTE
Subjt:  ----RVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDTE

Query:  IVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        IVTHRLPLK ECKP+RQKLRK+KP MLIK+K+EVKK
Subjt:  IVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase3.7e-4650.21Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKL--VKFFTAMTSRVNND---------------------------------------------DSK
        +KV+AK+KE RSA L G E K+ ++ +P+L ET KL  + F T    R N D                                             +++
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKL--VKFFTAMTSRVNND---------------------------------------------DSK

Query:  DKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGL
         + D+D  VDFEV + NLEQ++ E E D+S  LLRLIEQEEK TMSYQE L VIN G  E+VKE+RIGTL +  +++ L+ LLHE+KD+FAWSYQDM GL
Subjt:  DKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGL

Query:  DTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        DTEIVTHRLPLK ECKP+RQKLRK+KPEMLIK+K+EVKK
Subjt:  DTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

A0A5A7TZF3 Ribonuclease H3.8e-4360.87Show/hide
Query:  ETLKLVKFFTAMTSRVNNDDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRAN
        +TLK+ K     + +++N +++ + D+D  VDFEV + NLEQ++ E E D+S  LLRLIEQEEK TM YQE L+VIN G  E+VKE+RIGTL +  +++ 
Subjt:  ETLKLVKFFTAMTSRVNNDDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRAN

Query:  LIALLHEYKDMFAWSYQDMPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        L+ALLHE+KD+FAWSYQDMPGLDTEIVTH+LPLK ECK +RQKLRK+KP+ LIK+K+EVKK
Subjt:  LIALLHEYKDMFAWSYQDMPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

A0A5A7UA36 Reverse transcriptase domain-containing protein5.9e-4448.1Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLK--LVKFFTAMTSRVNND-------------------------------------------DSKDK
        +KV+ K+KE RSA L GRE K+ ++ +P+L ET K   + F T    R   D                                            ++ +
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLK--LVKFFTAMTSRVNND-------------------------------------------DSKDK

Query:  SDIDLRVDFEVSVYNLEQSVEE-EYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDT
         D+D  VDFEV + NLEQ++EE E D+S  L RLIEQEEK TM YQE L+VIN G  E+VKE++IGTL +  ++ +L+ LLH++ D+FAWSYQDMPGLDT
Subjt:  SDIDLRVDFEVSVYNLEQSVEE-EYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDT

Query:  EIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        EIVTH+LPLK ECKP+RQKLRK+KPEMLIK+K+EVKK
Subjt:  EIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

A0A5A7VAU5 Uncharacterized protein7.5e-4748.15Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVKFF---------------------------------------------------TAMTSRVNN
        +KV+AK KE RSA L G E K+ ++ +P+L ET KL +                                                     T  + +++N
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVKFF---------------------------------------------------TAMTSRVNN

Query:  DDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQD
         +++ + D+D  VDFEV + NLEQ++ E E D+S  LLRLIEQEEK TM YQE L+VIN G  E+VKE+RIGTL +  +++ L+ LLHE+KD+FAWSYQD
Subjt:  DDSKDKSDIDLRVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQD

Query:  MPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        MPGLDTEIVTHRLPLK ECKP+RQKLRK+KPEMLIK+K+EVKK
Subjt:  MPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

A0A5D3BMZ2 Protein NYNRIN-like7.0e-4550Show/hide
Query:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVK-FFTAMTSRVNNDDSK-----DKSDIDL----------------------------------
        +KV+AK+KE R+A L G E K+ ++ +P+L ET KL +  F     + +N+DS+        +I L                                  
Subjt:  KKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVK-FFTAMTSRVNNDDSK-----DKSDIDL----------------------------------

Query:  ----RVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDTE
             VDFEV +YNLEQ++ E E D+S  LLRLIEQEEK TM YQE L+VIN G  E+VKE+RIGTL +  +++ L+ALLHE+KD+FAWSYQDMP LDTE
Subjt:  ----RVDFEVSVYNLEQSV-EEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDTE

Query:  IVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK
        IVTHRLPLK ECKP+RQKLRK+KP MLIK+K+EVKK
Subjt:  IVTHRLPLKIECKPVRQKLRKMKPEMLIKVKKEVKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTGCTTGTTCAAGTTCTCAGTGATGCTGGATACATCTTAAAGGGACCTCAAAACAGTGGTGTCAATAAGTTAGAATATGATTCTGAAGCAAGATGTTGTGAAGA
GTTTAAAAAAAAGGTTCAAGCAAAAGAGAAAGAAGTGAGAAGTGCACGTTTGGAGGGACGGGAAGCCAAGCAAGGAAAGATGATTGTGCCCTATTTATTTGAGACTTTAA
AGCTGGTGAAATTCTTTACAGCAATGACCAGCAGGGTCAATAATGATGACTCTAAAGATAAAAGCGACATTGATTTAAGAGTTGATTTCGAAGTTTCAGTCTATAACCTT
GAGCAAAGCGTAGAAGAGGAGTATGATGTATCATCTTCACTGTTAAGATTAATAGAACAAGAGGAAAAGACAACCATGTCATACCAGGAACCTTTGGAAGTAATTAATTT
TGGGCACACGGAGCAAGTTAAAGAATTACGAATCGGTACTTTACCCGCAAGACACAATCGTGCAAACCTTATAGCTCTACTGCATGAGTATAAGGACATGTTTGCATGGT
CTTACCAGGATATGCCTGGCTTGGATACAGAAATTGTGACACATCGATTACCACTTAAAATTGAGTGCAAACCTGTAAGGCAAAAGCTGCGTAAAATGAAGCCTGAAATG
CTTATCAAAGTTAAGAAAGAGGTTAAAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTGCTTGTTCAAGTTCTCAGTGATGCTGGATACATCTTAAAGGGACCTCAAAACAGTGGTGTCAATAAGTTAGAATATGATTCTGAAGCAAGATGTTGTGAAGA
GTTTAAAAAAAAGGTTCAAGCAAAAGAGAAAGAAGTGAGAAGTGCACGTTTGGAGGGACGGGAAGCCAAGCAAGGAAAGATGATTGTGCCCTATTTATTTGAGACTTTAA
AGCTGGTGAAATTCTTTACAGCAATGACCAGCAGGGTCAATAATGATGACTCTAAAGATAAAAGCGACATTGATTTAAGAGTTGATTTCGAAGTTTCAGTCTATAACCTT
GAGCAAAGCGTAGAAGAGGAGTATGATGTATCATCTTCACTGTTAAGATTAATAGAACAAGAGGAAAAGACAACCATGTCATACCAGGAACCTTTGGAAGTAATTAATTT
TGGGCACACGGAGCAAGTTAAAGAATTACGAATCGGTACTTTACCCGCAAGACACAATCGTGCAAACCTTATAGCTCTACTGCATGAGTATAAGGACATGTTTGCATGGT
CTTACCAGGATATGCCTGGCTTGGATACAGAAATTGTGACACATCGATTACCACTTAAAATTGAGTGCAAACCTGTAAGGCAAAAGCTGCGTAAAATGAAGCCTGAAATG
CTTATCAAAGTTAAGAAAGAGGTTAAAAAGTAA
Protein sequenceShow/hide protein sequence
MKLLVQVLSDAGYILKGPQNSGVNKLEYDSEARCCEEFKKKVQAKEKEVRSARLEGREAKQGKMIVPYLFETLKLVKFFTAMTSRVNNDDSKDKSDIDLRVDFEVSVYNL
EQSVEEEYDVSSSLLRLIEQEEKTTMSYQEPLEVINFGHTEQVKELRIGTLPARHNRANLIALLHEYKDMFAWSYQDMPGLDTEIVTHRLPLKIECKPVRQKLRKMKPEM
LIKVKKEVKK