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Sgr019069 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr019069
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionIntegrase core domain containing protein
Genome locationtig00153284:436433..436723
RNA-Seq ExpressionSgr019069
SyntenySgr019069
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060208.1 Integrase, catalytic core [Cucumis melo var. makuwa]4.5e-2461.54Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNP
        MT+++A Q+MGF T+K+L + +QDLFGVQSR +ED+LRH FQ TRKG+  M +YL++MKT+ +NL  A SPI LRSL+SQ+L GLDE YNP
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNP

XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]4.3e-2761.46Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        MT ++ATQVMG++ + +LW  +Q+LFGVQS+A+EDYLR VFQQTRKGS+ MT++L+VMK+H DNL  A SP+  RSL+SQ+L GLDEEYNP+   +
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]5.1e-2867.71Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        M +D+A QVMGF TS+ELW  VQ+LFGVQSRA+ DYL+ VFQQT KGS+ M EYLK+MK+H DNLA+A S +++R LVSQ+L GLDEEYNPI V V
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

XP_038896600.1 uncharacterized protein LOC120084860 [Benincasa hispida]1.4e-2561.7Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITV
        M  D+A Q+MG++T+KELW  +Q+LFGVQSRA+EDYLR +FQQTRKG   M+ YLK+MK H DNLA   SP++ R+L+SQ+L GLDEEYN + V
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITV

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]1.2e-2460.42Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        MT+++A QVMG++  K LW  +Q+LFG+QSRA EDYLR VFQQT KG+M M EYL+VMKTH DNL +  SP+  R+LVSQ+L GLDEE+NP    +
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

TrEMBL top hitse value%identityAlignment
A0A0A0K3F9 Uncharacterized protein3.7e-2458.33Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        MT ++A Q+MGF T+K+LW+ +QDLFGVQ RA+ED+LRH FQ T+KG+  M +YL  MKT+VDNL  A S + L SL+SQ++ GLDE YNP+T V+
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

A0A5A7UY76 Integrase, catalytic core2.2e-2461.54Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNP
        MT+++A Q+MGF T+K+L + +QDLFGVQSR +ED+LRH FQ TRKG+  M +YL++MKT+ +NL  A SPI LRSL+SQ+L GLDE YNP
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNP

A0A5D3E3L7 Uncharacterized protein4.1e-2354.17Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        M  D+A Q+MGF T+K+LW+ +Q+LFG++SRA+E +LRH FQ TR+G+  M +YL++MK + DNL  A SP+  R L+SQ+L GLDE YNP+T V+
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

A0A6J1D5J0 uncharacterized protein LOC1110175012.1e-2761.46Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        MT ++ATQVMG++ + +LW  +Q+LFGVQS+A+EDYLR VFQQTRKGS+ MT++L+VMK+H DNL  A SP+  RSL+SQ+L GLDEEYNP+   +
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

A0A6J1DCW4 uncharacterized protein LOC1110195982.5e-2867.71Show/hide
Query:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        M +D+A QVMGF TS+ELW  VQ+LFGVQSRA+ DYL+ VFQQT KGS+ M EYLK+MK+H DNLA+A S +++R LVSQ+L GLDEEYNPI V V
Subjt:  MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.5e-0431.33Show/hide
Query:  TSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV
        T+++LW  +++LF     A+     +  + T    +++ EY + +K+  D L   DSPI+ R LV  +L GL E+Y+ I  V+
Subjt:  TSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCCGACATAGCTACACAAGTGATGGGTTTTCAGACATCAAAAGAGTTGTGGGATGTTGTGCAAGATCTGTTTGGAGTGCAGTCACGAGCCCAAGAAGACTACTT
GCGCCACGTATTTCAACAAACTAGAAAAGGATCCATGACAATGACTGAATATTTAAAAGTTATGAAAACTCATGTTGATAATCTGGCGGTAGCCGATAGTCCTATTACTC
TTCGTAGTTTGGTATCACAAATCTTGGCAGGACTAGATGAGGAATACAACCCCATCACTGTTGTAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTCCGACATAGCTACACAAGTGATGGGTTTTCAGACATCAAAAGAGTTGTGGGATGTTGTGCAAGATCTGTTTGGAGTGCAGTCACGAGCCCAAGAAGACTACTT
GCGCCACGTATTTCAACAAACTAGAAAAGGATCCATGACAATGACTGAATATTTAAAAGTTATGAAAACTCATGTTGATAATCTGGCGGTAGCCGATAGTCCTATTACTC
TTCGTAGTTTGGTATCACAAATCTTGGCAGGACTAGATGAGGAATACAACCCCATCACTGTTGTAGTTTAG
Protein sequenceShow/hide protein sequence
MTSDIATQVMGFQTSKELWDVVQDLFGVQSRAQEDYLRHVFQQTRKGSMTMTEYLKVMKTHVDNLAVADSPITLRSLVSQILAGLDEEYNPITVVV