| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6575671.1 30S ribosomal protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 3.9e-103 | 84.96 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAE AV+ QDP+SVAAR+LYIGNIPRNV N+EL RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISSTVSTETLKN
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
Query: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| XP_022153800.1 30S ribosomal protein 2, chloroplastic [Momordica charantia] | 6.9e-108 | 88.71 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSILSPPNLI+SSTK TETP KLSN+FLRPISFHRRP LLRLS L TS AK+ RLFAVAEAAVTAQDP+S AARRLYIGNIPRNVDN++L RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVT---VDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLK
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLNET+V GRTIKVNITEKPLVT VD SLLQAEESQFIDSPYKVYVGNISSTVSTETLK
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVT---VDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLK
Query: NLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
LFS KG VLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
Subjt: NLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| XP_022954328.1 30S ribosomal protein 2, chloroplastic-like isoform X1 [Cucurbita moschata] | 8.4e-106 | 84.31 | Show/hide |
Query: SHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNV
SH KL KMAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV
Subjt: SHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNV
Query: DNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISST
N+EL RIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISST
Subjt: DNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISST
Query: VSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
VSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: VSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| XP_022954329.1 30S ribosomal protein 2, chloroplastic-like isoform X2 [Cucurbita moschata] | 1.8e-103 | 85.37 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISSTVSTETLKN
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
Query: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| XP_022991923.1 30S ribosomal protein 2, chloroplastic-like [Cucurbita maxima] | 1.3e-103 | 85.37 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISSTVSTETLKN
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
Query: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UYL6 30S ribosomal protein 2 | 8.8e-93 | 79.67 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSIL+P NLI++S K TE Q LS++FLRPISFH LLR+SP A+ PTRLFAVAEAA Q +SVA R+LYIGNIPRNV+N+EL RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
+EHGAVEKAEVMYDKYSGRSRRFAFVTMK+V+DANA IEKLNET+VGGR IKVNITEKP+V TVD S+LQAEESQFIDSPYKVYVGNISSTVSTETLKN
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
Query: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| A0A6J1DHV7 30S ribosomal protein 2, chloroplastic | 3.3e-108 | 88.71 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSILSPPNLI+SSTK TETP KLSN+FLRPISFHRRP LLRLS L TS AK+ RLFAVAEAAVTAQDP+S AARRLYIGNIPRNVDN++L RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVT---VDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLK
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLNET+V GRTIKVNITEKPLVT VD SLLQAEESQFIDSPYKVYVGNISSTVSTETLK
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVT---VDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLK
Query: NLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
LFS KG VLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
Subjt: NLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| A0A6J1GQT6 30S ribosomal protein 2, chloroplastic-like isoform X1 | 4.1e-106 | 84.31 | Show/hide |
Query: SHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNV
SH KL KMAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV
Subjt: SHLKLYRPKMASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNV
Query: DNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISST
N+EL RIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISST
Subjt: DNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISST
Query: VSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
VSTETLKN FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: VSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| A0A6J1GSN8 30S ribosomal protein 2, chloroplastic-like isoform X2 | 8.5e-104 | 85.37 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISSTVSTETLKN
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
Query: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| A0A6J1JXN0 30S ribosomal protein 2, chloroplastic-like | 6.5e-104 | 85.37 | Show/hide |
Query: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
MAS+SSIL+P NLI+SS K TE PQ LS +FLRPISFH R LLR+SPGL TS K TRLFAVAEAAV+ QDP+SVAAR+LYIGNIPRNV N+EL RIV
Subjt: MASVSSILSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIV
Query: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
EEHGAVEKAEVMYDKYSGRSRRFAFVTMK+VDDANAVIEKLN+T+VGGRTIKVNITEKPLV TVD SLLQA+ESQFIDSPYKVYVGNISSTVSTETLKN
Subjt: EEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNL
Query: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
FS KG+VLSAKVSRVPGTSKSSGYGFVTFSSEEEVE AISSFNNAL
Subjt: FSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P19684 33 kDa ribonucleoprotein, chloroplastic | 1.8e-26 | 38.82 | Show/hide |
Query: SVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEE
SV RLY+GN+P ++ + +L+ I E G V E++YD+ + RSR FAFVTM SV++A I + + VGGRT+KVN E P V + +++
Subjt: SVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEE
Query: SQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
F+DSP+K+YV N+S ++++ L++ F+ + +SAKV + +S G+GF+TFSS E + +A+ + N
Subjt: SQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
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| P82277 30S ribosomal protein 2, chloroplastic | 1.4e-63 | 55.02 | Show/hide |
Query: MASVSSILSPPNLI-YSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTS---VAARRLYIGNIPRNVDNKEL
MA++SSIL L+ + S+ S+ + K S++ L + L+L + T+ R E + ++ +S ARRLY+GNIPRN++N EL
Subjt: MASVSSILSPPNLI-YSSTKSTETPQKLSNRFLRPISFHRRPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTS---VAARRLYIGNIPRNVDNKEL
Query: ARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETL
IVEEHGA+E AEVMYDKYSGRSRRF FVTMK+V+DANAVIEKLN+T++GGR IKVNITEKPL +D + QAE+SQF++SPYKVY+GN++ TV+ E L
Subjt: ARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETL
Query: KNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
K+ FS KG+VL AKV R PGTSKS+G+GFV+FSSEEEVE AI + NN++
Subjt: KNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNAL
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| Q39061 RNA-binding protein CP33, chloroplastic | 2.8e-27 | 38.18 | Show/hide |
Query: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFID
RLY+GN+P + + EL++I E G V +++YDK + RSR F FVTM S+++A ++ N + +GGRT+KVN E P V + ++ ++D
Subjt: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFID
Query: SPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
SP+KVY GN+ ++++ LK+ F + VL AKV T +S G+GF++F S E V++A+++ N
Subjt: SPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
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| Q8VYM4 30S ribosomal protein 2, chloroplastic | 1.1e-63 | 63.29 | Show/hide |
Query: RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIE
R + R P +T T + P L DP+S AARR+YIGNIPR V N++L ++VEEHGAVEK +VMYDKYSGRSRRF F TMKSV+DANAV+E
Subjt: RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIE
Query: KLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAI
KLN V GR IKVNITEKP+ + D S+LQ+E+S F+DSPYKVYVGN++ TV+ E L+NLFS KG+V+SAKVSRVPGTSKS+G+GFVTFSSEE+VE AI
Subjt: KLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAI
Query: SSFNNAL
+ NN+L
Subjt: SSFNNAL
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| Q9ZUU4 RNA-binding protein CP29B, chloroplastic | 6.4e-24 | 38.2 | Show/hide |
Query: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQF-----
+L++GN+P NVD+ +LA++ E G VE EV+YDK +GRSR F FVTM SV + A ++ N ++ GR ++VN P D + S F
Subjt: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQF-----
Query: ---------IDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNA
S +VYVGN+S V L++LFS +G+V+ A+V + +S G+GFVT+ S +EV+ AI S + A
Subjt: ---------IDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNA
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 5.7e-28 | 32.54 | Show/hide |
Query: LSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRL---SPGLLTSTAKNPTRLFAVAEAAVTAQ--------------DPTSVAARRLYIGNIPRN
++ +++ S KS P L ++ LLR +P L ++++ +R F V +T + DP + +LY GN+P N
Subjt: LSPPNLIYSSTKSTETPQKLSNRFLRPISFHRRPNLLRL---SPGLLTSTAKNPTRLFAVAEAAVTAQ--------------DPTSVAARRLYIGNIPRN
Query: VDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQFIDSPYKVYVGNISST
VD+ LA+I+++ E EV+Y++ +G+SR FAFVTM +V+D N +I+ L+ T+ GR +KVN +KP +E + ++ +K++VGN+S T
Subjt: VDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQFIDSPYKVYVGNISST
Query: VSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
V++E+L F G V+ A+V T +S GYGFV +SS+ E+ETA+ S +
Subjt: VSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
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| AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 4.5e-25 | 38.2 | Show/hide |
Query: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQF-----
+L++GN+P NVD+ +LA++ E G VE EV+YDK +GRSR F FVTM SV + A ++ N ++ GR ++VN P D + S F
Subjt: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPLVTVDFSLLQAEESQF-----
Query: ---------IDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNA
S +VYVGN+S V L++LFS +G+V+ A+V + +S G+GFVT+ S +EV+ AI S + A
Subjt: ---------IDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFNNA
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| AT3G52150.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 7.7e-65 | 63.29 | Show/hide |
Query: RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIE
R + R P +T T + P L DP+S AARR+YIGNIPR V N++L ++VEEHGAVEK +VMYDKYSGRSRRF F TMKSV+DANAV+E
Subjt: RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIE
Query: KLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAI
KLN V GR IKVNITEKP+ + D S+LQ+E+S F+DSPYKVYVGN++ TV+ E L+NLFS KG+V+SAKVSRVPGTSKS+G+GFVTFSSEE+VE AI
Subjt: KLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAI
Query: SSFNNAL
+ NN+L
Subjt: SSFNNAL
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| AT3G52150.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 7.7e-65 | 63.29 | Show/hide |
Query: RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIE
R + R P +T T + P L DP+S AARR+YIGNIPR V N++L ++VEEHGAVEK +VMYDKYSGRSRRF F TMKSV+DANAV+E
Subjt: RPNLLRLSPGLLTSTAKNPTRLFAVAEAAVTAQDPTSVAARRLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIE
Query: KLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAI
KLN V GR IKVNITEKP+ + D S+LQ+E+S F+DSPYKVYVGN++ TV+ E L+NLFS KG+V+SAKVSRVPGTSKS+G+GFVTFSSEE+VE AI
Subjt: KLNETDVGGRTIKVNITEKPLV-TVDFSLLQAEESQFIDSPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAI
Query: SSFNNAL
+ NN+L
Subjt: SSFNNAL
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| AT3G52380.1 chloroplast RNA-binding protein 33 | 2.0e-28 | 38.18 | Show/hide |
Query: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFID
RLY+GN+P + + EL++I E G V +++YDK + RSR F FVTM S+++A ++ N + +GGRT+KVN E P V + ++ ++D
Subjt: RLYIGNIPRNVDNKELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKSVDDANAVIEKLNETDVGGRTIKVNITEKPL---VTVDFSLLQAEESQFID
Query: SPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
SP+KVY GN+ ++++ LK+ F + VL AKV T +S G+GF++F S E V++A+++ N
Subjt: SPYKVYVGNISSTVSTETLKNLFSGKGQVLSAKVSRVPGTSKSSGYGFVTFSSEEEVETAISSFN
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