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Sgr019933 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr019933
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationtig00153425:1236378..1236803
RNA-Seq ExpressionSgr019933
SyntenySgr019933
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsIPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PKU64373.1 RNA-directed DNA polymerase [Dendrobium catenatum]5.9e-3357.81Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALP
        F V+ + FLGF ++S   + +D  KI AI +W TP T  DV+ F GL +FYR++I+NFSS+ AP+TD LK   F+WT+EQ  SF  +K+ LSTAPMLALP
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALP

Query:  NFSKPFEVAMDASSIGIGAVLSQENHPI
        NF KPF V  DAS IGIGAVLSQEN P+
Subjt:  NFSKPFEVAMDASSIGIGAVLSQENHPI

XP_026429996.1 uncharacterized protein LOC113326491 [Papaver somniferum]3.5e-3357.81Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALP
        F+ S++ FLG+ +IS K I +D +K+QAI +W  P ++K+V+ F GL SFYR+++RNFS++AAPLTD LKK  F WT E   SFN LKEKL + P+LALP
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALP

Query:  NFSKPFEVAMDASSIGIGAVLSQENHPI
        +FSKPF+V  DAS IGIG VLS E HP+
Subjt:  NFSKPFEVAMDASSIGIGAVLSQENHPI

XP_031375598.1 uncharacterized protein LOC116190075 [Punica granatum]1.9e-3155.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

XP_031375622.1 uncharacterized protein LOC116190097 [Punica granatum]1.9e-3155.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

XP_031375623.1 uncharacterized protein LOC116190098 [Punica granatum]1.9e-3155.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

TrEMBL top hitse value%identityAlignment
A0A2I0VLW0 RNA-directed DNA polymerase2.9e-3357.81Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALP
        F V+ + FLGF ++S   + +D  KI AI +W TP T  DV+ F GL +FYR++I+NFSS+ AP+TD LK   F+WT+EQ  SF  +K+ LSTAPMLALP
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALP

Query:  NFSKPFEVAMDASSIGIGAVLSQENHPI
        NF KPF V  DAS IGIGAVLSQEN P+
Subjt:  NFSKPFEVAMDASSIGIGAVLSQENHPI

A0A6P8BX76 Reverse transcriptase9.3e-3255.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

A0A6P8C2J8 uncharacterized protein LOC1161900759.3e-3255.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

A0A6P8C2M8 Reverse transcriptase9.3e-3255.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

A0A6P8E7T2 Reverse transcriptase9.3e-3255.04Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL
        F +  + FLGF ++S K + +D  K++AI  W TP T+ +V+ F GL  FYR+++RNFS++AAPLT+ +KK + F W  EQ  +FNTLKEKLS+AP+L L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGM-FYWTIEQTVSFNTLKEKLSTAPMLAL

Query:  PNFSKPFEVAMDASSIGIGAVLSQENHPI
        P+FSKPFE+  DAS IGIGAVL QE  PI
Subjt:  PNFSKPFEVAMDASSIGIGAVLSQENHPI

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.62.3e-1940Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTI--EQTVSFNTLKEKLSTAPMLA
        F+  E  FLG  +++   I  +  KI+AI  +  P   K+++ F+GLT +YRK+I NF+ +A P+T  LKK M   T   E   +F  LK  +S  P+L 
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTI--EQTVSFNTLKEKLSTAPMLA

Query:  LPNFSKPFEVAMDASSIGIGAVLSQENHPI
        +P+F+K F +  DAS + +GAVLSQ+ HP+
Subjt:  LPNFSKPFEVAMDASSIGIGAVLSQENHPI

P10401 Retrovirus-related Pol polyprotein from transposon gypsy7.6e-1538.06Show/hide
Query:  FLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFL------------KKGMFYWTIEQTVSFNTLKEKLSTAP
        +LGF I+S      D  K++AI  +  P  V  V+ F+GL S+YR +I++F+++A P+TD L            KK    +   Q  +F  L+  L++  
Subjt:  FLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFL------------KKGMFYWTIEQTVSFNTLKEKLSTAP

Query:  -MLALPNFSKPFEVAMDASSIGIGAVLSQENHPI
         +L  P+F KPF++  DAS+ GIGAVLSQE  PI
Subjt:  -MLALPNFSKPFEVAMDASSIGIGAVLSQENHPI

P20825 Retrovirus-related Pol polyprotein from transposon 2971.3e-1739.23Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWT--IEQTVSFNTLKEKLSTAPMLA
        F+  E  FLG  I++   I  +  K++AI ++  P   K+++ F+GLT +YRK+I N++ +A P+T  LKK     T  +E   +F  LK  +   P+L 
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWT--IEQTVSFNTLKEKLSTAPMLA

Query:  LPNFSKPFEVAMDASSIGIGAVLSQENHPI
        LP+F K F +  DAS++ +GAVLSQ  HPI
Subjt:  LPNFSKPFEVAMDASSIGIGAVLSQENHPI

P92523 Uncharacterized mitochondrial protein AtMg008602.4e-1636.89Show/hide
Query:  ELCFLGF-IIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALPNFS
        ++ +LG   IISG+ ++ D AK++A+  W  P    +++ F+GLT +YR++++N+  +  PLT+ LKK    WT    ++F  LK  ++T P+LALP+  
Subjt:  ELCFLGF-IIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALPNFS

Query:  KPF
         PF
Subjt:  KPF

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus7.3e-1838.41Show/hide
Query:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFY-----------WTIEQTV--SFNTL
        F+ +++ FLG+ I++   I  D  K++AIS    P +VK+++ F+G+TS+YRK+I++++ +A PLT+ L +G++             T+++T   SFN L
Subjt:  FVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFY-----------WTIEQTV--SFNTL

Query:  KEKLSTAPMLALPNFSKPFEVAMDASSIGIGAVLSQEN
        K  L ++ +LA P F+KPF +  DAS+  IGAVLSQ++
Subjt:  KEKLSTAPMLALPNFSKPFEVAMDASSIGIGAVLSQEN

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.7e-1736.89Show/hide
Query:  ELCFLGF-IIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALPNFS
        ++ +LG   IISG+ ++ D AK++A+  W  P    +++ F+GLT +YR++++N+  +  PLT+ LKK    WT    ++F  LK  ++T P+LALP+  
Subjt:  ELCFLGF-IIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALPNFS

Query:  KPF
         PF
Subjt:  KPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGTGGTTTCTGAATTATGCTTCCTAGGTTTTATTATAATAAGTGGGAAAGACATTGCGATAGACTCAGCAAAAATCCAAGCCATTAGCAATTGGCAAACACCCCT
CACGGTTAAAGACGTACAATGTTTTATGGGATTAACATCATTTTATAGAAAATACATAAGAAATTTCAGCTCCTTGGCTGCACCCCTTACAGATTTCCTTAAGAAGGGTA
TGTTCTATTGGACAATCGAACAAACTGTAAGTTTCAACACTCTTAAAGAAAAGCTTAGCACCGCCCCTATGTTGGCATTACCTAATTTCTCTAAGCCCTTTGAAGTAGCA
ATGGACGCATCTAGCATAGGGATAGGGGCCGTCTTATCTCAAGAGAATCATCCAATAGGGATAGGGGCCGTCTTATTTCAGAGAAAAGTTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGTGGTTTCTGAATTATGCTTCCTAGGTTTTATTATAATAAGTGGGAAAGACATTGCGATAGACTCAGCAAAAATCCAAGCCATTAGCAATTGGCAAACACCCCT
CACGGTTAAAGACGTACAATGTTTTATGGGATTAACATCATTTTATAGAAAATACATAAGAAATTTCAGCTCCTTGGCTGCACCCCTTACAGATTTCCTTAAGAAGGGTA
TGTTCTATTGGACAATCGAACAAACTGTAAGTTTCAACACTCTTAAAGAAAAGCTTAGCACCGCCCCTATGTTGGCATTACCTAATTTCTCTAAGCCCTTTGAAGTAGCA
ATGGACGCATCTAGCATAGGGATAGGGGCCGTCTTATCTCAAGAGAATCATCCAATAGGGATAGGGGCCGTCTTATTTCAGAGAAAAGTTGAGTGA
Protein sequenceShow/hide protein sequence
MFVVSELCFLGFIIISGKDIAIDSAKIQAISNWQTPLTVKDVQCFMGLTSFYRKYIRNFSSLAAPLTDFLKKGMFYWTIEQTVSFNTLKEKLSTAPMLALPNFSKPFEVA
MDASSIGIGAVLSQENHPIGIGAVLFQRKVE