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Sgr019935 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr019935
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionTranscription elongation factor 1 homolog
Genome locationtig00153425:1268112..1268266
RNA-Seq ExpressionSgr019935
SyntenySgr019935
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007808 - Transcription elongation factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058841.1 Transcription elongation factor 1 isoform 2 [Cucumis melo var. makuwa]6.9e-1187.18Show/hide
Query:  QEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        Q+MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  QEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
KAD4982421.1 hypothetical protein E3N88_19092 [Mikania micrantha]3.4e-1079.07Show/hide
Query:  RITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        R     MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  RITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
KAF9666587.1 hypothetical protein SADUNF_Sadunf16G0244300 [Salix dunnii]1.2e-1089.47Show/hide
Query:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        EMGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
TKS06718.1 transcription elongation factor 1-like [Populus alba]1.2e-1089.47Show/hide
Query:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        EMGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
XP_038896920.1 transcription elongation factor 1 homolog [Benincasa hispida]2.4e-1183.33Show/hide
Query:  ITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        I+ Q+MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  ITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
TrEMBL top hitse value%identityAlignment
A0A4U5Q8R7 Transcription elongation factor 1 homolog5.7e-1189.47Show/hide
Query:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        EMGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
A0A5A7UZC1 Transcription elongation factor 1 homolog3.3e-1187.18Show/hide
Query:  QEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        Q+MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  QEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
A0A5K0Y186 Transcription elongation factor 1 homolog (Fragment)1.3e-1086.84Show/hide
Query:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        +MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  EMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
A0A5N6NM69 Transcription elongation factor 1 homolog1.6e-1079.07Show/hide
Query:  RITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        R     MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  RITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
F6H1Z3 Transcription elongation factor 1 homolog1.3e-1084.62Show/hide
Query:  QEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        ++MGK KSRAKPPP KRMDKLDT FSCPF NHGTSVECR
Subjt:  QEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
SwissProt top hitse value%identityAlignment
Q8LEF3 Transcription elongation factor 1 homolog1.4e-1186.11Show/hide
Query:  MGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVEC
        MGK KSRAKP PTKRMDKLDT FSCPF NHG+SVEC
Subjt:  MGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVEC
Q8LHP0 Transcription elongation factor 1 homolog8.4e-1283.78Show/hide
Query:  MGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
        MGK KS AKPPP KRMDKLDT FSCPF NHG+SVECR
Subjt:  MGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECR
Arabidopsis top hitse value%identityAlignment
AT5G46030.1 unknown protein1.0e-1286.11Show/hide
Query:  MGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVEC
        MGK KSRAKP PTKRMDKLDT FSCPF NHG+SVEC
Subjt:  MGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVEC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTGTTTATGGATGTGAATAGAATCACGCCACAAGAAATGGGGAAAATAAAGTCAAGAGCAAAGCCCCCACCTACGAAGAGAATGGACAAGCTTGATACTGCTTT
CAGCTGCCCCTTCTACAATCATGGAACCAGTGTGGAATGTCGCAT
mRNA sequenceShow/hide mRNA sequence
ATGATATTGTTTATGGATGTGAATAGAATCACGCCACAAGAAATGGGGAAAATAAAGTCAAGAGCAAAGCCCCCACCTACGAAGAGAATGGACAAGCTTGATACTGCTTT
CAGCTGCCCCTTCTACAATCATGGAACCAGTGTGGAATGTCGCAT
Protein sequenceShow/hide protein sequence
MILFMDVNRITPQEMGKIKSRAKPPPTKRMDKLDTAFSCPFYNHGTSVECRX