| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN68489.1 hypothetical protein VITISV_037543 [Vitis vinifera] | 1.2e-34 | 35.08 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF +F++ VENQ N++I+ LR D G EFK +Y GIK Q SCP+T QN ++LINR+PT +L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
++PF++L+ K P+Y + K+FG CYPY+R + NKL++ +++C+F+GYS HKGY L +GR+Y++ HV F+E F + + DQ S
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
Query: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
V +P P F PC S + +L+ + ++ +N ST SL I+TS N HP++TRAK GISK K +F SH+ S+P T +
Subjt: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
Query: PTRHS
+ S
Subjt: PTRHS
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| KYP50444.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 4.5e-34 | 35.79 | Show/hide |
Query: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
F QFR VENQ N +IK+L+ D G EFK L GI+++ SCP+TS QN V+LINR+PT +++
Subjt: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
Query: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSPI
K+P++ L++K PDY+ +K FG CYP L+ + +KL FHTTKC+F+GYS HKGYK L ++GRI+IS HV FNE F GF +T + + P
Subjt: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSPI
Query: VALLPLPLFPCPSLILPALQMFSPCRKTTS---------------------SQSNDSPSTPSLITTSINAHPVITRAKAGISKPK
L P+ P S + Q ++S SQ+ + S SIN H + TR+K GI KPK
Subjt: VALLPLPLFPCPSLILPALQMFSPCRKTTS---------------------SQSNDSPSTPSLITTSINAHPVITRAKAGISKPK
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| KYP71160.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] | 1.3e-33 | 35.59 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF+QF+ VE QLN KIKS++ D G E++ + GI +L CPHT QN VYLINR+PTA L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSP
PF +L+++ PDY LK FG C+P+LR + +KL+F + +C+F+GYS+ HKGYK L+ASG+IYIS V FNE F F T Y
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSP
Query: IVALLPLPLFPCPSLILPALQMFSPCRKT----------TSSQSNDSPSTP------SLITTSINAHPVITRAKAGISKPK
+ L P + LP + + + T SQ N +PS+P + ++ +IN H + TR+K+GI KPK
Subjt: IVALLPLPLFPCPSLILPALQMFSPCRKT----------TSSQSNDSPSTP------SLITTSINAHPVITRAKAGISKPK
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| RVW64314.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.0e-34 | 35.08 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF +F++ VENQ N++I+ LR D G EFK +Y GIK Q SCP+T QN ++LINR+PT +L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
++PF++L+ K P+Y + K+FG CYPY+R + NKL++ +++C+F+GYS HKGY L +GR+Y++ HV F+E F + + DQ S
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
Query: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
V +P P F PC S + +L+ + ++ +N ST SL I+TS N HP++TRAK GISK K +F SH+ S+P T +
Subjt: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
Query: PTRHS
+ S
Subjt: PTRHS
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| RVX06084.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.0e-34 | 35.08 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF +F++ VENQ N++I+ LR D G EFK +Y GIK Q SCP+T QN ++LINR+PT +L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
++PF++L+ K P+Y + K+FG CYPY+R + NKL++ +++C+F+GYS HKGY L +GR+Y++ HV F+E F + + DQ S
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
Query: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
V +P P F PC S + +L+ + ++ +N ST SL I+TS N HP++TRAK GISK K +F SH+ S+P T +
Subjt: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
Query: PTRHS
+ S
Subjt: PTRHS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A151S6M8 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.2e-34 | 35.79 | Show/hide |
Query: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
F QFR VENQ N +IK+L+ D G EFK L GI+++ SCP+TS QN V+LINR+PT +++
Subjt: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
Query: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSPI
K+P++ L++K PDY+ +K FG CYP L+ + +KL FHTTKC+F+GYS HKGYK L ++GRI+IS HV FNE F GF +T + + P
Subjt: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSPI
Query: VALLPLPLFPCPSLILPALQMFSPCRKTTS---------------------SQSNDSPSTPSLITTSINAHPVITRAKAGISKPK
L P+ P S + Q ++S SQ+ + S SIN H + TR+K GI KPK
Subjt: VALLPLPLFPCPSLILPALQMFSPCRKTTS---------------------SQSNDSPSTPSLITTSINAHPVITRAKAGISKPK
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| A0A438FWJ3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.7e-35 | 35.08 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF +F++ VENQ N++I+ LR D G EFK +Y GIK Q SCP+T QN ++LINR+PT +L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
++PF++L+ K P+Y + K+FG CYPY+R + NKL++ +++C+F+GYS HKGY L +GR+Y++ HV F+E F + + DQ S
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
Query: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
V +P P F PC S + +L+ + ++ +N ST SL I+TS N HP++TRAK GISK K +F SH+ S+P T +
Subjt: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
Query: PTRHS
+ S
Subjt: PTRHS
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| A0A438JAU4 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.7e-35 | 35.08 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF +F++ VENQ N++I+ LR D G EFK +Y GIK Q SCP+T QN ++LINR+PT +L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
++PF++L+ K P+Y + K+FG CYPY+R + NKL++ +++C+F+GYS HKGY L +GR+Y++ HV F+E F + + DQ S
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
Query: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
V +P P F PC S + +L+ + ++ +N ST SL I+TS N HP++TRAK GISK K +F SH+ S+P T +
Subjt: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
Query: PTRHS
+ S
Subjt: PTRHS
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| A0A803Q615 Uncharacterized protein | 1.3e-34 | 37.5 | Show/hide |
Query: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
F F+T EN L+ KIKSL+ D G E++ + + GI Q SCPHTS QN VYLINR+PT +L+
Subjt: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
Query: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSPI
GK+P E+L+ K PDY LK FG TCYP LR +Q +K +H+TKC+ +GYSD HKGYK L+++GR+YIS +V FNE++F GF +T Q++ + +
Subjt: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSPI
Query: VALLPLPLFPCPSLILPALQMFSPCRKTTSSQSNDSPSTP
+ + P S P++ + S + PS P
Subjt: VALLPLPLFPCPSLILPALQMFSPCRKTTSSQSNDSPSTP
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| A5C001 Integrase catalytic domain-containing protein | 5.7e-35 | 35.08 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
VF +F++ VENQ N++I+ LR D G EFK +Y GIK Q SCP+T QN ++LINR+PT +L
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAIL
Query: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
++PF++L+ K P+Y + K+FG CYPY+R + NKL++ +++C+F+GYS HKGY L +GR+Y++ HV F+E F + + DQ S
Subjt: EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLT-ASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYS
Query: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
V +P P F PC S + +L+ + ++ +N ST SL I+TS N HP++TRAK GISK K +F SH+ S+P T +
Subjt: PIVALLPLPLF-PCPSLILPALQMFSPCRKTTSSQSNDSPSTPSL----------ITTS----INAHPVITRAKAGISKPKHFFGHFSHLPSSDPWTECE
Query: PTRHS
+ S
Subjt: PTRHS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 4.1e-06 | 26.74 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEF--KLLITYAKDLGIKIQLSCPHTSPQNEV----------------------------------YLINRMPTA
+F+ F E N K+ L D G E+ + + GI L+ PHT N V YLINR+P+
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEF--KLLITYAKDLGIKIQLSCPHTSPQNEV----------------------------------YLINRMPTA
Query: IL--EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYI
L KTP+E+ + K P L+VFG T Y +++ Q K + + K +F+GY G+K A +I
Subjt: IL--EGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYLTASGRIYI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.5e-08 | 28.75 | Show/hide |
Query: VFKQFRTPVENQLNAKIKSLRFDEGSEF--KLLITYAKDLGIKIQLSCPHTSPQNEV----------------------------------YLINRMPTA
VF++F VE + K+K LR D G E+ + Y GI+ + + P T N V YLINR P+
Subjt: VFKQFRTPVENQLNAKIKSLRFDEGSEF--KLLITYAKDLGIKIQLSCPHTSPQNEV----------------------------------YLINRMPTA
Query: ILEGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYK
L + P + K YS LKVFG + ++ Q KL+ + C+FIGY D GY+
Subjt: ILEGKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.8e-20 | 29.55 | Show/hide |
Query: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
F F+ +EN+ +I + D G EF L Y GI S PHT N VYLINR+PT +L+
Subjt: FKQFRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILE
Query: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYL-TASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSP
++PF+ L+ P+Y L+VFG CYP+LR + +KL+ + +C+F+GYS Y L + R+YIS HV+F+E F ++ T Q++ S
Subjt: GKTPFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYL-TASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSP
Query: IVALLPLPLFPCPSLILPALQMFSPCRKTTSSQSNDSPSTPSLITTS
+ + P P + +LPA P T S +P S +++S
Subjt: IVALLPLPLFPCPSLILPALQMFSPCRKTTSSQSNDSPSTPSLITTS
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.2e-21 | 32.53 | Show/hide |
Query: FRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILEGKT
F++ VEN+ +I +L D G EF +L Y GI S PHT N VYLINR+PT +L+ ++
Subjt: FRTPVENQLNAKIKSLRFDEGSEFKLLITYAKDLGIKIQLSCPHTSPQN----------------------------------EVYLINRMPTAILEGKT
Query: PFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYL-TASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSP-IV
PF+ L+ + P+Y LKVFG CYP+LR + +KL + +C F+GYS Y L +GR+Y S HV+F+E F + + T Q++ +P
Subjt: PFELLYEKIPDYSMLKVFGTTCYPYLRLFQINKLNFHTTKCLFIGYSDLHKGYKYL-TASGRIYISWHVKFNEEDFLCAHGFWTADTDQDKDFSYSP-IV
Query: ALLPLPLFPCPSLILPALQMFSPCRKTTSSQSNDSPSTPS-LITTSINA
+ LP P L+LPA PC S PS+PS L TT +++
Subjt: ALLPLPLFPCPSLILPALQMFSPCRKTTSSQSNDSPSTPS-LITTSINA
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