; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr020904 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr020904
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionHistone H2B
Genome locationtig00153577:167439..169110
RNA-Seq ExpressionSgr020904
SyntenySgr020904
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000558 - Histone H2B
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652780.1 hypothetical protein Csa_022685 [Cucumis sativus]8.3e-5394.35Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDASDKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

XP_022152883.1 histone H2B.7 [Momordica charantia]6.4e-5395.16Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDA+DKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

XP_022964641.1 histone H2B.7-like [Cucurbita moschata]1.9e-5293.55Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDASDKKKK++KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

XP_022964661.1 histone H2B.7-like [Cucurbita moschata]1.9e-5293.55Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDA+DKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

XP_038893815.1 histone H2B.7-like [Benincasa hispida]8.3e-5394.35Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDASDKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

TrEMBL top hitse value%identityAlignment
A0A0A0LV55 Histone H2B4.0e-5394.35Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDASDKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

A0A5A7SNI2 Histone H2B4.0e-5394.35Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDASDKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

A0A6J1DG30 Histone H2B3.1e-5395.16Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDA+DKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

A0A6J1I3M0 Histone H2B9.0e-5393.55Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDA+DKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

A0A6J1I594 Histone H2B9.0e-5393.55Show/hide
Query:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        +++ +APAEKKPRAEKKLPKDASDKKKK++KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
Subjt:  EESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

SwissProt top hitse value%identityAlignment
O49118 Histone H2B7.3e-5288.89Show/hide
Query:  EESREAPAEKKPRAEKKLPKDAS--DKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV
        +++ E PAEKKP+A KKLPKDA   DKKKKR+KKS+ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAV
Subjt:  EESREAPAEKKPRAEKKLPKDAS--DKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV

Query:  RLVLPGELAKHAVSEGTKAVTKFTSS
        RLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLVLPGELAKHAVSEGTKAVTKFTSS

O65819 Histone H2B.3 (Fragment)4.3e-5291.13Show/hide
Query:  SREAPAEKKPRAEKKLPKDAS--DKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL
        + +APAEKKP+A KKLPKDA+  DKKKKRSKK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRL
Subjt:  SREAPAEKKPRAEKKLPKDAS--DKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRL

Query:  VLPGELAKHAVSEGTKAVTKFTSS
        VLPGELAKHAVSEGTKAVTKFTSS
Subjt:  VLPGELAKHAVSEGTKAVTKFTSS

P40283 Histone H2B.116.2e-5188.89Show/hide
Query:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV
        ++ +APAEKKP+A KKLPK+A    DKKKK  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAV
Subjt:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV

Query:  RLVLPGELAKHAVSEGTKAVTKFTSS
        RLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLVLPGELAKHAVSEGTKAVTKFTSS

Q1S9I9 Probable histone H2B.11.6e-5189.68Show/hide
Query:  SREAPAEKKPRAEKKLPKD----ASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV
        + +APAEKKP+A KKLPK+    A +KKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAV
Subjt:  SREAPAEKKPRAEKKLPKD----ASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV

Query:  RLVLPGELAKHAVSEGTKAVTKFTSS
        RLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLVLPGELAKHAVSEGTKAVTKFTSS

Q9LQQ4 Histone H2B.12.8e-5183.94Show/hide
Query:  EEASGEEAGGRGEESREAPAEKKPRAEKKL-PKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKP
        ++ + E      + + +APAEKKP+A KKL PK+A DKKKKRSKK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKP
Subjt:  EEASGEEAGGRGEESREAPAEKKPRAEKKL-PKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKP

Query:  TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Arabidopsis top hitse value%identityAlignment
AT1G07790.1 Histone superfamily protein2.0e-5283.94Show/hide
Query:  EEASGEEAGGRGEESREAPAEKKPRAEKKL-PKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKP
        ++ + E      + + +APAEKKP+A KKL PK+A DKKKKRSKK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKP
Subjt:  EEASGEEAGGRGEESREAPAEKKPRAEKKL-PKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKP

Query:  TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
        TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  TITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

AT3G45980.1 Histone superfamily protein7.5e-5288.89Show/hide
Query:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV
        ++ +APAEKKP+A KKLPK+A    DKKKK  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAV
Subjt:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV

Query:  RLVLPGELAKHAVSEGTKAVTKFTSS
        RLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLVLPGELAKHAVSEGTKAVTKFTSS

AT3G46030.1 Histone superfamily protein7.5e-5288.89Show/hide
Query:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV
        ++ +APAEKKP+A KKLPK+A    DKKKK  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAV
Subjt:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV

Query:  RLVLPGELAKHAVSEGTKAVTKFTSS
        RLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLVLPGELAKHAVSEGTKAVTKFTSS

AT5G22880.1 histone B21.3e-5191.8Show/hide
Query:  APAEKKPRAEKKLPKD---ASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL
        A AEKKP+A KKLPK+   A DKKKKRSKK+VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVRLVL
Subjt:  APAEKKPRAEKKLPKD---ASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVL

Query:  PGELAKHAVSEGTKAVTKFTSS
        PGELAKHAVSEGTKAVTKFTSS
Subjt:  PGELAKHAVSEGTKAVTKFTSS

AT5G59910.1 Histone superfamily protein4.4e-5288.89Show/hide
Query:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV
        ++ +APAEKKP+A KKLPK+A    DKKKK  KKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAV
Subjt:  ESREAPAEKKPRAEKKLPKDA---SDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAV

Query:  RLVLPGELAKHAVSEGTKAVTKFTSS
        RLVLPGELAKHAVSEGTKAVTKFTSS
Subjt:  RLVLPGELAKHAVSEGTKAVTKFTSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTACGTGATTTAGGGATGACAACGGAGGGCAGGGACGAGGACAGGGATGTATTCCCATCTCCGTCCCTACGGCCAAATCGAATTCATACCAATGGCACCGAAGG
CCGAGAAGAAGCCAGCGGAGAAGAAGCCGGCGGCAGAGGAGAAGAAAGCAGAGAAGCGCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTGCCGAAAGACGCCTCCG
ATAAGAAGAAGAAGAGGTCGAAGAAGAGCGTGGAGACTTACAAGATCTACATCTTCAAGGTGCTAAAGCAAGTTCATCCTGACATTGGAATTTCCAGCAAGGCCATGGGA
ATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCGTCCAAGCTCGCTCGGTACAACAAGAAGCCGACGATTACCTCTAGGGAAATCCAAACGGC
GGTGCGGCTAGTTCTTCCTGGTGAGTTGGCCAAGCATGCCGTCTCTGAGGGTACCAAGGCTGTAACCAAGTTTACTAGCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTACGTGATTTAGGGATGACAACGGAGGGCAGGGACGAGGACAGGGATGTATTCCCATCTCCGTCCCTACGGCCAAATCGAATTCATACCAATGGCACCGAAGG
CCGAGAAGAAGCCAGCGGAGAAGAAGCCGGCGGCAGAGGAGAAGAAAGCAGAGAAGCGCCGGCGGAGAAGAAGCCGAGAGCCGAGAAGAAGCTGCCGAAAGACGCCTCCG
ATAAGAAGAAGAAGAGGTCGAAGAAGAGCGTGGAGACTTACAAGATCTACATCTTCAAGGTGCTAAAGCAAGTTCATCCTGACATTGGAATTTCCAGCAAGGCCATGGGA
ATTATGAACAGTTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCGTCCAAGCTCGCTCGGTACAACAAGAAGCCGACGATTACCTCTAGGGAAATCCAAACGGC
GGTGCGGCTAGTTCTTCCTGGTGAGTTGGCCAAGCATGCCGTCTCTGAGGGTACCAAGGCTGTAACCAAGTTTACTAGCTCTTAG
Protein sequenceShow/hide protein sequence
MRLRDLGMTTEGRDEDRDVFPSPSLRPNRIHTNGTEGREEASGEEAGGRGEESREAPAEKKPRAEKKLPKDASDKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMG
IMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS