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Sgr021125 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr021125
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionTHO complex subunit 4D
Genome locationtig00153640:864887..865174
RNA-Seq ExpressionSgr021125
SyntenySgr021125
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR025715 - Chromatin target of PRMT1 protein, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145851.1 THO complex subunit 4D [Cucumis sativus]2.3e-2082.89Show/hide
Query:  VFGFRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        V  F  PSHRGGLRN RGRGRG WSRG+G  GGG G G GRGRGRGRGQGRKKPVEKSSDELDKEL+NYHAEAMQT
Subjt:  VFGFRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

XP_008457020.1 PREDICTED: THO complex subunit 4D [Cucumis melo]1.9e-1982.19Show/hide
Query:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLRN RGRGRG W+RG+G  G G GR  GRGRGRGRGQGRKKPVEKSSDELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

XP_022935328.1 THO complex subunit 4D-like [Cucurbita moschata]4.8e-1876.54Show/hide
Query:  FRSPSHRGGLRN--GRGRGRGNWSRGL------GQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLR+  GRGRGRG WSRGL      G  GGGRGRG G G GRGRGQGRKKPVEKSS ELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRN--GRGRGRGNWSRGL------GQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

XP_023527122.1 THO complex subunit 4D [Cucurbita pepo subsp. pepo]4.8e-1876.54Show/hide
Query:  FRSPSHRGGLRN--GRGRGRGNWSRGL------GQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLR+  GRGRGRG WSRGL      G  GGGRGRG G G GRGRGQGRKKPVEKSS ELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRN--GRGRGRGNWSRGL------GQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

XP_038896761.1 THO complex subunit 4D-like [Benincasa hispida]1.0e-2084.93Show/hide
Query:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLRNGRGRGRG W+RG G  GGG GR  GRGRGRGRGQGRKKPVEKSSDELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

TrEMBL top hitse value%identityAlignment
A0A0A0LCJ7 FoP_duplication domain-containing protein1.1e-2082.89Show/hide
Query:  VFGFRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        V  F  PSHRGGLRN RGRGRG WSRG+G  GGG G G GRGRGRGRGQGRKKPVEKSSDELDKEL+NYHAEAMQT
Subjt:  VFGFRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

A0A1S3C452 THO complex subunit 4D9.3e-2082.19Show/hide
Query:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLRN RGRGRG W+RG+G  G G GR  GRGRGRGRGQGRKKPVEKSSDELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

A0A6J1CP51 THO complex subunit 4D-like4.8e-1678.08Show/hide
Query:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PS+RG LR GRGRGRG WSRG GQ GGGR    GRGRGRGRG GRKK VEKSSDELDK+L+NYHAEAMQT
Subjt:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

A0A6J1FAB9 THO complex subunit 4D-like2.3e-1876.54Show/hide
Query:  FRSPSHRGGLRN--GRGRGRGNWSRGL------GQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLR+  GRGRGRG WSRGL      G  GGGRGRG G G GRGRGQGRKKPVEKSS ELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRN--GRGRGRGNWSRGL------GQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

A0A6J1J564 THO complex subunit 4D-like6.7e-1869.23Show/hide
Query:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSG------------GGRGRGLGR------GRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        F  PSHRGGLR+GRGRGRG WSRGLG  G            GGRGRG GR      G GRGRGQGRKKPVEKSS ELDKEL+NYHAEAMQT
Subjt:  FRSPSHRGGLRNGRGRGRGNWSRGLGQSG------------GGRGRGLGR------GRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

SwissProt top hitse value%identityAlignment
Q6NQ72 THO complex subunit 4D2.5e-0651.9Show/hide
Query:  RSPSHR---GGLRNGRG----RGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        R P H    GG+R GRG    RGRGN         GGRGRG GRG G       KKPVEKS+ +LDK+L++YHA+AM T
Subjt:  RSPSHR---GGLRNGRG----RGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

Q94EH8 THO complex subunit 4C1.4e-0453.16Show/hide
Query:  RGGLRNGRGRGRGNWSRGL-----------GQSGGGRGRGLGRGRGRGR---GQGRKKPVEKSSDELDKELDNYHAEAM
        RGG R GRGRG G   R L              GG RGRG G G GRG    G+G KKPVEKS+ +LDK+L++YHAEAM
Subjt:  RGGLRNGRGRGRGNWSRGL-----------GQSGGGRGRGLGRGRGRGR---GQGRKKPVEKSSDELDKELDNYHAEAM

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.9e-0653.16Show/hide
Query:  RGGLRNGRGRGRGNWSRGL-----------GQSGGGRGRGLGRGRGRGR---GQGRKKPVEKSSDELDKELDNYHAEAM
        RGG R GRGRG G   R L              GG RGRG G G GRG    G+G KKPVEKS+ +LDK+L++YHAEAM
Subjt:  RGGLRNGRGRGRGNWSRGL-----------GQSGGGRGRGLGRGRGRGR---GQGRKKPVEKSSDELDKELDNYHAEAM

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.9e-0653.16Show/hide
Query:  RGGLRNGRGRGRGNWSRGL-----------GQSGGGRGRGLGRGRGRGR---GQGRKKPVEKSSDELDKELDNYHAEAM
        RGG R GRGRG G   R L              GG RGRG G G GRG    G+G KKPVEKS+ +LDK+L++YHAEAM
Subjt:  RGGLRNGRGRGRGNWSRGL-----------GQSGGGRGRGLGRGRGRGR---GQGRKKPVEKSSDELDKELDNYHAEAM

AT5G37720.1 ALWAYS EARLY 41.8e-0751.9Show/hide
Query:  RSPSHR---GGLRNGRG----RGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        R P H    GG+R GRG    RGRGN         GGRGRG GRG G       KKPVEKS+ +LDK+L++YHA+AM T
Subjt:  RSPSHR---GGLRNGRG----RGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT

AT5G37720.2 ALWAYS EARLY 41.8e-0751.9Show/hide
Query:  RSPSHR---GGLRNGRG----RGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT
        R P H    GG+R GRG    RGRGN         GGRGRG GRG G       KKPVEKS+ +LDK+L++YHA+AM T
Subjt:  RSPSHR---GGLRNGRG----RGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTCAAATTGATAGAACAATTTGTTATCATAGCTGTTTGGTTTTTATTAGCGTTTTTGGATTTCGTAGTCCAAGCCATCGTGGAGGCCTGAGGAATGGCCGTGG
CCGTGGGCGAGGGAACTGGAGTCGTGGTTTGGGTCAAAGTGGAGGAGGCCGAGGCCGAGGGCTTGGCCGGGGCCGTGGTCGTGGCCGTGGACAGGGGAGGAAGAAACCTG
TGGAGAAGTCTTCAGATGAACTTGACAAGGAGCTTGACAACTATCATGCAGAGGCCATGCAAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCTCAAATTGATAGAACAATTTGTTATCATAGCTGTTTGGTTTTTATTAGCGTTTTTGGATTTCGTAGTCCAAGCCATCGTGGAGGCCTGAGGAATGGCCGTGG
CCGTGGGCGAGGGAACTGGAGTCGTGGTTTGGGTCAAAGTGGAGGAGGCCGAGGCCGAGGGCTTGGCCGGGGCCGTGGTCGTGGCCGTGGACAGGGGAGGAAGAAACCTG
TGGAGAAGTCTTCAGATGAACTTGACAAGGAGCTTGACAACTATCATGCAGAGGCCATGCAAACCTGA
Protein sequenceShow/hide protein sequence
MAAQIDRTICYHSCLVFISVFGFRSPSHRGGLRNGRGRGRGNWSRGLGQSGGGRGRGLGRGRGRGRGQGRKKPVEKSSDELDKELDNYHAEAMQT