CuGenDBv2

Gene ID	Sgr021281
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	30S ribosomal protein S5
Genome location	tig00153654:539537..539942
RNA-Seq Expression	Sgr021281
Synteny	Sgr021281
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005763 - mitochondrial small ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004386 - helicase activity (molecular function)
InterPro domains	IPR000851 - Ribosomal protein S5 IPR005324 - Ribosomal protein S5, C-terminal IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup IPR020568 - Ribosomal protein S5 domain 2-type fold

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571211.1 hypothetical protein SDJN03_30126, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-32

98.65

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

KAG7011014.1 rpsE, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.0e-32

98.65

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

XP_022947619.1 uncharacterized protein LOC111451428 [Cucurbita moschata]

2.6e-32

97.3

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

XP_023512942.1 uncharacterized protein LOC111777531 [Cucurbita pepo subsp. pepo]

2.0e-32

98.65

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

XP_023533655.1 uncharacterized protein LOC111795451 [Cucurbita pepo subsp. pepo]

2.6e-32

97.3

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D5I3 uncharacterized protein LOC111017222

4.9e-32

97.3

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPAST TGMKAGKTVQTVLNLAGFKNVKSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

A0A6J1FXC7 DEAD-box ATP-dependent RNA helicase 42

2.8e-32

97.3

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPAST+TGMKAGKTVQTVLNLAGFKNVKSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

A0A6J1G7C4 uncharacterized protein LOC111451428

1.3e-32

97.3

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKN+KSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

A0A6J1J864 uncharacterized protein LOC111484333

3.7e-32

97.3

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKV+GSRNPHN LKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

A0A6J1KZ96 uncharacterized protein LOC111499608

4.9e-32

95.95

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        VYLWPA TTTGMKAGKTVQTVLNLAGFKN+KSKV+GSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

SwissProt top hits

e value

%identity

Alignment

A5VXR4 30S ribosomal protein S5

2.5e-09

45.71

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE
        VY+ PAS  TG+ AG  ++ VL +AG +NV +K  GS NP N + A FK L A+++P+ I  K G++V E
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE

C3K2V9 30S ribosomal protein S5

1.9e-09

47.14

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE
        VY+ PAS  TG+ AG  ++ VL +AG +NV +K  GS NP N + A FK L A+++P+ I  K G TV E
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE

Q1IFU9 30S ribosomal protein S5

6.6e-10

47.14

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE
        VY+ PAS  TG+ AG  ++ VL +AG +NV +K  GS NP N + A FK L A+++P+ I  K G+TV E
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE

Q2S929 30S ribosomal protein S5

1.9e-09

44.29

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE
        V++ PAS  TG+ AG  ++ VL +AG +NV +K  GS NP N ++A F+ L A++ P++I  K G+TV E
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE

Q4K550 30S ribosomal protein S5

1.9e-09

45.71

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE
        VY+ PAS  TG+ AG  ++ VL +AG +NV +K  GS NP N + A FK L A+++P+ I  K G++V E
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVE

Arabidopsis top hits

e value

%identity

Alignment

AT1G64880.1 Ribosomal protein S5 family protein

1.0e-29

79.73

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL
        +YLWPA TTTGMKAG+ V+T+L LAGFKN+KSKVIGSRN +NT+KA+ KALNA+ETPKD+QEKFGRTVVEKYLL
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

AT2G33800.1 Ribosomal protein S5 family protein

6.5e-05

36.92

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Query:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFG
        V L PAS  TG+ AG  V+ VL +AG +N   K +GS N  N  +A   A+  +   +D+ ++ G
Subjt:  VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFG

Sequences

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CDS sequence

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GTGTATCTTTGGCCAGCATCAACTACGACAGGCATGAAAGCAGGGAAAACTGTTCAAACTGTTTTGAATCTGGCTGGTTTTAAAAATGTCAAATCTAAGGTTATTGGCTC
AAGGAACCCCCACAATACCCTGAAGGCCCTCTTCAAAGCTCTGAATGCAATCGAAACTCCAAAGGACATTCAAGAAAAGTTCGGGCGGACTGTTGTCGAGAAGTACTTGC
TATGA

mRNA sequence

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Protein sequence

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VYLWPASTTTGMKAGKTVQTVLNLAGFKNVKSKVIGSRNPHNTLKALFKALNAIETPKDIQEKFGRTVVEKYLL

Sgr021281 (gene) of Monk fruit (Qingpiguo) v1 genome