| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 1.6e-258 | 92.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+ + NDHRLGQNQVS TK VVIAK SA+FSPSYP SNRH Q IKAVKEHVDTPSSPTAEPWL + T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDA RGK +KKVPVTCSGVSARQRRM+SKRKIQSK+ FMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+IS AELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 1.1e-259 | 93.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQR-IKAVKEHVDTPSSPTAEPWLQSPTQWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+ +AND+RLGQ QVSPTK VVIAKSSANFSPSYP SNRH+Q+ IKAVKEHV+TPSSPTAEPWL + T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQR-IKAVKEHVDTPSSPTAEPWLQSPTQWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD R K KKVPVTCSGVSARQRRM+SKRKIQSK+ FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKIS AELRSR++ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_022148631.1 RNA polymerase sigma factor sigA [Momordica charantia] | 2.4e-265 | 95.08 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EKL +ANDHRLGQ+QVSPTK VVIAKSSANFSPS+PSSNRHTQ IKAVKEHVDTPSSPT EPWLQ+ TQWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDASRG+ QKKVPVTCSGVSARQRRM+SKRKIQSKNCFM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKIS ELRSRVIECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 2.8e-258 | 92.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+ + NDHRLGQNQVS TK VVIAK SA+FSPSYP SNRH Q IKAVKEHVDTPSSPTAEPWL + T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD RGK +KKVPVTCSGVSARQRRM+SKRKIQSK+ F+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+IS AELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 5.8e-264 | 95.09 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHA-NDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+ + NDHRLGQ QVSPTK VVIAKSSANFSPSYPSSNRH+Q IKAVKEHVDTPSSPTAEPWL + T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHA-NDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDA RGK +KKVPVTCSGVSARQRRM+SKRKIQSK+ FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKIS AELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 5.5e-260 | 93.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQR-IKAVKEHVDTPSSPTAEPWLQSPTQWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+ +AND+RLGQ QVSPTK VVIAKSSANFSPSYP SNRH+Q+ IKAVKEHV+TPSSPTAEPWL + T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQR-IKAVKEHVDTPSSPTAEPWLQSPTQWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD R K KKVPVTCSGVSARQRRM+SKRKIQSK+ FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKIS AELRSR++ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 5.5e-260 | 93.52 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQR-IKAVKEHVDTPSSPTAEPWLQSPTQWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+ +AND+RLGQ QVSPTK VVIAKSSANFSPSYP SNRH+Q+ IKAVKEHV+TPSSPTAEPWL + T WED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQR-IKAVKEHVDTPSSPTAEPWLQSPTQWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD R K KKVPVTCSGVSARQRRM+SKRKIQSK+ FMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKIS AELRSR++ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 1.1e-265 | 95.08 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EKL +ANDHRLGQ+QVSPTK VVIAKSSANFSPS+PSSNRHTQ IKAVKEHVDTPSSPT EPWLQ+ TQWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDASRG+ QKKVPVTCSGVSARQRRM+SKRKIQSKNCFM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKIS ELRSRVIECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 6.7e-258 | 92.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+ + NDHRLGQNQVS TK VVIAK SA+FSPSYP SNRH Q IKAVKEHVDTPSSPTAEPWL + T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD RGK +KKVPVTCSGVSARQRRMNSKRKIQSK+ FMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL CEPSE+QLAISL+IS AELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 5.2e-258 | 92.32 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+ + NDHRLGQNQVS TK VVIAK SA+FSPSY SNRH Q IKAVKEHVDTPSSPTAEPWL + T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDA RGK +KKVPVTCSGVSARQRRM+SKRKIQSK+ FMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDASRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE KTRLKERL C+PSE+QLAISL+IS AELRSRV+ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O24629 RNA polymerase sigma factor sigA | 1.1e-188 | 68.8 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWE---
MATAA+IGL KRLL+SS Y+SD TEK NDH Q ++ TK + AK ++N+SPS+PSSNRHTQ KA+KE VD S T +PWL + T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD-ASRGKM-QKKVPV-TCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ +G + +KK+PV TCSG+SARQRR+ +K+K + +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD-ASRGKM-QKKVPV-TCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKIS AEL++ ++EC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 6.5e-40 | 34.24 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 8.4e-40 | 34.44 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q03065 RNA polymerase sigma-B factor | 9.3e-39 | 33.11 | Show/hide |
Query: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
LLSH + + +++++ + + K L E+L EP+ + A +++ L ++ + +A++K+ +N+RLV+SIA++Y E DL+Q G +GL R
Subjt: LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLR
Query: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
G+EKFD + G+K STY YWWIRQG++RA+ + SRT+RLP H+ ++L I+ + L +K G + IA++LN+ +++ + + + SLD
Subjt: GIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPS
Query: LNGLPGETH-HSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
G +T + D+ + +P + +L +++ L+ L +++E++ L GL C LT +IS+R+G+SRERVRQV AL L++
Subjt: LNGLPGETH-HSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLKK
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| Q0J7T6 RNA polymerase sigma factor sigA | 3.6e-131 | 51.5 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHT---------------QRIKAVKEHVD----
M AT A+IGL A RLL++S +D +K+S LG + +F+P P++ + T Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSD-FTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHT---------------QRIKAVKEHVD----
Query: -TPSSPTAEPWLQSPTQWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDA------SRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQ
P P P SP DL+ ++EA++LLQ+SMLEKQW L F+ A + V V S VSARQRRM+ +R+ ++KN
Subjt: -TPSSPTAEPWLQSPTQWEDEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDA------SRGKMQKKVPVTCSGVSARQRRMNSKRKIQSKNCFMAQ
Query: PKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSN
+SPEL+Q+R + Y++G VS+ELL+H +VV LS KIK G+ L++++++LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MSN
Subjt: PKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSN
Query: VRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIA
+RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: VRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIA
Query: ESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKR
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: ESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKR
Query: IGLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: IGLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.9e-39 | 35.81 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
+ N P E IAD + D I ++ +++K+++ +L RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNKLINMTLEDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
Query: KTRKMEAMLL
+ ++ L+
Subjt: KTRKMEAMLL
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| AT1G64860.1 sigma factor A | 7.8e-190 | 68.8 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWE---
MATAA+IGL KRLL+SS Y+SD TEK NDH Q ++ TK + AK ++N+SPS+PSSNRHTQ KA+KE VD S T +PWL + T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD-ASRGKM-QKKVPV-TCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ +G + +KK+PV TCSG+SARQRR+ +K+K + +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD-ASRGKM-QKKVPV-TCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKIS AEL++ ++EC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 3.2e-175 | 67.63 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWE---
MATAA+IGL KRLL+SS Y+SD TEK NDH Q ++ TK + AK ++N+SPS+PSSNRHTQ KA+KE VD S T +PWL + T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKLSHANDHRLGQNQVSPTKRVVIAKSSANFSPSYPSSNRHTQRIKAVKEHVDTPSSPTAEPWLQSPTQWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD-ASRGKM-QKKVPV-TCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ +G + +KK+PV TCSG+SARQRR+ +K+K + +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD-ASRGKM-QKKVPV-TCSGVSARQRRMNSKRKIQSKNCFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K+RLK+RLGCEPS++QLA+SLKIS AEL++ ++EC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TL +RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.2e-36 | 32.59 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 1.1e-34 | 36.18 | Show/hide |
Query: VKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSL-----AREKLAMSNVRLVMSIAQRYDNMGAEM
V G LS E V+L +K G L E LG E+++ L S + R L AREK+ RLV+SIA Y G +
Subjt: VKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISHAELRSRVIECSL-----AREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAI
DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E + A L K PS + IAE LN++ V+ A E
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAI
Query: SKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVAL
SLDR A + G I E P +K E+ +L+ +L RE ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL
Subjt: SKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINMTLEDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVAL
Query: EKLK
+KL+
Subjt: EKLK
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