; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr021354 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr021354
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationtig00153661:425081..432141
RNA-Seq ExpressionSgr021354
SyntenySgr021354
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]2.9e-18884.91Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSGK+K+LHNMSES+SEQE V   GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
        +GSEFPL+  +  +                  EF+NNPIGPKD DII+ARL  GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAE
Subjt:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

KAG7028290.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-18784.62Show/hide
Query:  MSGKNKSLHNMSESESEQE--GVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEF
        MSGK K+LHNMSES+SEQ+    GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+EF
Subjt:  MSGKNKSLHNMSESESEQE--GVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPS
        DMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP+
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPS

Query:  GSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEE
        GSEFPL+  +  +                  EF+NNPIGPKD DII+ARL  GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAEE
Subjt:  GSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEE

Query:  LKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        LK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  LKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]2.9e-18884.91Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSGK+K+LHNMSES+SEQE V   GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
        +GSEFPL+  +  +                  EF+NNPIGPKD DII+ARL  GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAE
Subjt:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]5.0e-18884.91Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSGK+K+LHNMSES+SE E V   GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
        +GSEFPL+  +  +                  EF+NNPIGPKD DII+ARL  GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAE
Subjt:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]1.5e-19287.72Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSGK+KSLHNMS+SESEQEGV   GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVID++EDDIE
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNTIVFRLHA CERGK RLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
        +GSEFPL+  +  +                  EFSNNPIGPKD+DII+ARLGPGQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE++DELAE
Subjt:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELKKKCPV+VFDIEDIA GKKRATVARPRACTLCRECIRG+ WEKRV+LRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC12.0e-18785.2Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSGK+K+LHNMSESESEQEGV   GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVID++EDDIE
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTS+ QDEVLAHRLGL+PI VDPRLF+YSDKD PNE NTIVFRLHA CERGKPRLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLL-------------------QSRHATEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELA
        +GSEFPL+                   Q+  + EFSNNPIGPKD+DII+ARLGPGQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVL+EE+EDELA
Subjt:  SGSEFPLL-------------------QSRHATEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELA

Query:  EELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        EEL+KKCPV+VFDIEDIA GKKRATVARPR CTLCRECIRG+ WEKRV+LRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  EELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC14.5e-18787.63Show/hide
Query:  MSESESEQEG--VGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALA
        MS+SESEQ     GIEWIMNLPDVPMKLPPHLE+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFKIEVID+ EDDIEFDMIGIDPALA
Subjt:  MSESESEQEG--VGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALA

Query:  NAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSR
        NAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSK LTWLP+GSEFPL+  +
Subjt:  NAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSR

Query:  HA------------------TEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVF
                             EFSNN IGPKDNDIIIARLGPGQEIELEAHA+KGMGKTHAKWSPVATAWY+MLPEVVL EE+EDELAEELKKKCPVDVF
Subjt:  HA------------------TEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVF

Query:  DIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        DIEDIANGKKRA VARPR+CTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  DIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC13.0e-18383.85Show/hide
Query:  MSGKNKSLHNMSESESEQ--EGVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEF
        MS K+K   ++  S+ EQ     GIEWIMNLPDVPMKLPPHLEL RTRVECKADAPIHTDTIQYSGA+ASMGVDNSL+LDYFRNNFKIEVID+ EDDIEF
Subjt:  MSGKNKSLHNMSESESEQ--EGVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEF

Query:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPS
        DMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP+
Subjt:  DMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPS

Query:  GSEFPLLQSRHA------------------TEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEE
        GSEFPL+  +                     EFS NPIGPKD+DIIIARL PGQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAEE
Subjt:  GSEFPLLQSRHA------------------TEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEE

Query:  LKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        LK KCPVDVFDIEDIANGKKRATV RPR+CTLCRECIRGE WEKRVSLRRVK+HFIFKIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  LKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC11.4e-18884.91Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSGK+K+LHNMSES+SEQE V   GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
        +GSEFPL+  +  +                  EF+NNPIGPKD DII+ARL  GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLE++EDELAE
Subjt:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC12.0e-18784.4Show/hide
Query:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE
        MSG++K+LH+MSES+SEQE V   GIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVID++EDD+E
Subjt:  MSGKNKSLHNMSESESEQEGV---GIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTS+ QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNTIVFRLH RCERGKPRLT TS+ALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLP

Query:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE
        +GSEFPL+  +  +                  EF+NNPIGPKD DII+ARL  GQEIELEAHA+KGMGKTHAKWSPVATAWYRMLPEVVLLEE+EDELAE
Subjt:  SGSEFPLLQSRHAT------------------EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAE

Query:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        ELK KCPV+VFDIEDIANGKKRATVARPRACTLCRECIRGE WEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC13.6e-8047.54Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
        +E  R+RV        +  T  + G ++  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS+ QDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDND
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L        F    I P  +D
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDND

Query:  IIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEK
        I+IA+L PGQEI+L  H +KG+GK HAK+SPVATA YR+LP++ LLE VE E AEEL +     V +++++  GKK A VA PR  T  RE  R E+ +K
Subjt:  IIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEK

Query:  RVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
         V L RV+DH+IF +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  RVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC15.3e-6840.35Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
        ++  RT +   +D      ++ + G +     DN   LD F+ N K+ +  + ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTS+ QDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSKA----LTWLPSGSEFPLLQSRHATEFSNNPIGP
        VL+HR+GL+PI  DP +F++     P ++      +T+VF L+ +CE  K          RL V S+     L W P G        R    F++NPI  
Subjt:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTIVFRLHARCERGK---------PRLTVTSKA----LTWLPSGSEFPLLQSRHATEFSNNPIGP

Query:  KDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGE
         + DI++A+L PGQEI+LEAHAI G+G+ HAK+SPVATA YR+LP + +L  +E E A + +K  P  V ++E+  +GKK+A VA  R  T+ REC+R  
Subjt:  KDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGE

Query:  QWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
        ++  +V L RV+DH++F +ESTG + P+VLF +++ +L+ KC
Subjt:  QWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

P52432 DNA-directed RNA polymerases I and III subunit RPAC18.8e-7948.12Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
        +E  RTRV        +  T  + G +A  G D++   + F  NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS+ QDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE

Query:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDND
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R                   V ++ +TW+P G++        A  F    I P  +D
Subjt:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDND

Query:  IIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEK
        I+IA+L PGQEI+L  H +KG+GK HAK+SPVATA YR+LP + LLE VE E AEEL +     V ++E++  GKK A VA  R  T  RE  R E+ +K
Subjt:  IIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEK

Query:  RVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
         V L RV+DH+IF +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  RVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC14.2e-8148.41Show/hide
Query:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE
        +E  RTRV        +  T  + G ++  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTS+ QDE
Subjt:  LELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDND
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R                   V ++ +TW+P G++  L        F    I P  +D
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTIVFRLHARCERGKPRL-------------TVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDND

Query:  IIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEK
        I+IA+L PGQEI+L  H +KG+GK HAK+SPVATA YR+LP++ LLE VE E AEEL +     V ++++I  GKK A VA PR  T  RE  R E+ +K
Subjt:  IIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEK

Query:  RVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL
         V L RV+DHFIF +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  RVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac13.2e-7344.51Show/hide
Query:  PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQ
        P+LE +RT+V        +     YSGA+ S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTS+ Q
Subjt:  PHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKALTWLPSGSE---FPLLQSRHATEFSNNPIGPKDNDI
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+    GK    T  SK L W+P+  +   FP  + R           P ++DI
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTIVFRLHARCER----GK-PRLTVTSKALTWLPSGSE---FPLLQSRHATEFSNNPIGPKDNDI

Query:  IIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKR
         I +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + ++ + A +L +KCP  VFDIED      +   ARP  CT+CRECIR  ++E+ 
Subjt:  IIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKR

Query:  VSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC
        V + RV+DHFIF IESTGAL    +F EA+KI  +KC
Subjt:  VSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKC

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 439.8e-13466.48Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPHLELQRTRV CK D+ IH   I +SGA++SMGVDNS+RL+ F  +FK++VI + E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT-------------
        KV VANNTSV QDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNTIVF+LH +C +G PR  V +  L WLP+GSE  + +S  +T             
Subjt:  KVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT-------------

Query:  ----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARP
            EF+ NPI P   DI+IA+LGPGQEIELEAHA+KG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL K CP  VFDIED+  G+KRATVARP
Subjt:  ----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARP

Query:  RACTLCRECIR-GEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        R C+LCRECIR G +WE +V LRRVK+HFIF IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  RACTLCRECIR-GEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein5.6e-12162.4Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ + + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT------------
        EKVL+A NTSV  DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLP+GSE  L +S + T            
Subjt:  EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT------------

Query:  -----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVAR
             EF+NNPI P D DI+IA+L PGQEIELEAHA+KG+GKTHAKWSPV TAWYRM PEVVL  EVEDELAE L   CP +VFDIED+  GKKRATVA+
Subjt:  -----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  PRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein5.6e-12162.4Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ + + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT------------
        EKVL+A NTSV  DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLP+GSE  L +S + T            
Subjt:  EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT------------

Query:  -----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVAR
             EF+NNPI P D DI+IA+L PGQEIELEAHA+KG+GKTHAKWSPV TAWYRM PEVVL  EVEDELAE L   CP +VFDIED+  GKKRATVA+
Subjt:  -----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL
        PR CTLC+EC+R +     V L  VK+HFIF IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  PRACTLCRECIRGEQWEKRVSLRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein1.1e-8160.15Show/hide
Query:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPHL+ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ + + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT------------
        EKVL+A NTSV  DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNTIVF+LH +C + +PRL V +  L WLP+GSE  L +S + T            
Subjt:  EKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHAT------------

Query:  -----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEV
             EF+NNPI P D DI+IA+L PGQEIELEAHA+KG+GKTHAKWSPV TAWYRM PEV
Subjt:  -----EFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein1.4e-3433.79Show/hide
Query:  KIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA
        KI++ ++++D  +F++   D ++ANA RR++I+EVPT+AI+ V +  N+SV  DE +AHRLGLIP+  +        R  +  D D   E  ++ FRL +
Subjt:  KIEVIDIREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTIVFRLHA

Query:  RCERGKPRLTVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDEL
        +C   +  L VTS+ L      S  P +     T  S+     +   III +L  GQE++L A A KG+GK HAKWSP AT  +   P++++ E++ D L
Subjt:  RCERGKPRLTVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGPKDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDEL

Query:  AEELK----KKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVK---DHFIFKIESTGALPPEVLFTEAVKILEDKCE
        ++E K    +  P  VF ++ +    ++  V  P A T   E I+  +   +  L  +    D FIF +ESTGA+    L   A+ +L+ K +
Subjt:  AEELK----KKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRRVK---DHFIFKIESTGALPPEVLFTEAVKILEDKCE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGTAAAAATAAGAGCTTGCATAATATGTCAGAGTCAGAATCTGAACAAGAGGGTGTAGGCATTGAATGGATAATGAATCTTCCAGATGTGCCCATGAAGCTCCC
ACCACACCTTGAATTGCAGAGGACCCGAGTTGAATGCAAAGCTGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCGATGGGTGTTGATAACA
GTTTACGATTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATATCAGAGAGGATGACATTGAGTTTGACATGATTGGTATTGATCCGGCACTCGCTAATGCA
TTTCGGAGAATCCTTATAGCTGAGGTCCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCAGTAACCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCT
CATTCCGATTCATGTTGATCCAAGGCTTTTCGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTCGACTCCATGCTCGCTGTGAACGTGGAAAAC
CTCGTCTTACAGTGACATCAAAAGCATTGACGTGGTTACCAAGTGGTAGCGAATTTCCTTTGTTGCAGTCAAGACACGCTACCGAATTTTCCAACAATCCAATTGGTCCA
AAGGACAATGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTATTAAAGGCATGGGTAAAACACACGCTAAGTGGTCCCCGGTGGC
CACTGCTTGGTACAGGATGCTTCCTGAGGTTGTACTTTTGGAGGAGGTAGAGGATGAATTGGCTGAAGAACTCAAAAAGAAATGCCCTGTTGATGTATTTGATATTGAAG
ACATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGCCCACGGGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGAACAATGGGAGAAACGTGTCTCATTGCGTCGT
GTTAAGGATCATTTCATCTTTAAGATTGAATCAACGGGAGCTTTACCTCCTGAAGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGC
TGAGCTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGTAAAAATAAGAGCTTGCATAATATGTCAGAGTCAGAATCTGAACAAGAGGGTGTAGGCATTGAATGGATAATGAATCTTCCAGATGTGCCCATGAAGCTCCC
ACCACACCTTGAATTGCAGAGGACCCGAGTTGAATGCAAAGCTGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCGATGGGTGTTGATAACA
GTTTACGATTGGATTATTTTCGCAACAACTTTAAAATTGAAGTGATTGATATCAGAGAGGATGACATTGAGTTTGACATGATTGGTATTGATCCGGCACTCGCTAATGCA
TTTCGGAGAATCCTTATAGCTGAGGTCCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCAGTAACCCAAGATGAAGTGCTTGCCCATAGGTTAGGTCT
CATTCCGATTCATGTTGATCCAAGGCTTTTCGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCATTGTTTTTCGACTCCATGCTCGCTGTGAACGTGGAAAAC
CTCGTCTTACAGTGACATCAAAAGCATTGACGTGGTTACCAAGTGGTAGCGAATTTCCTTTGTTGCAGTCAAGACACGCTACCGAATTTTCCAACAATCCAATTGGTCCA
AAGGACAATGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAATTGAACTTGAAGCTCATGCTATTAAAGGCATGGGTAAAACACACGCTAAGTGGTCCCCGGTGGC
CACTGCTTGGTACAGGATGCTTCCTGAGGTTGTACTTTTGGAGGAGGTAGAGGATGAATTGGCTGAAGAACTCAAAAAGAAATGCCCTGTTGATGTATTTGATATTGAAG
ACATAGCTAATGGTAAGAAAAGGGCAACTGTTGCACGCCCACGGGCTTGCACATTGTGTAGAGAATGCATAAGAGGAGAACAATGGGAGAAACGTGTCTCATTGCGTCGT
GTTAAGGATCATTTCATCTTTAAGATTGAATCAACGGGAGCTTTACCTCCTGAAGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGC
TGAGCTCTCTTGA
Protein sequenceShow/hide protein sequence
MSGKNKSLHNMSESESEQEGVGIEWIMNLPDVPMKLPPHLELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDIREDDIEFDMIGIDPALANA
FRRILIAEVPTMAIEKVLVANNTSVTQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTIVFRLHARCERGKPRLTVTSKALTWLPSGSEFPLLQSRHATEFSNNPIGP
KDNDIIIARLGPGQEIELEAHAIKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDELAEELKKKCPVDVFDIEDIANGKKRATVARPRACTLCRECIRGEQWEKRVSLRR
VKDHFIFKIESTGALPPEVLFTEAVKILEDKCERLIAELS