; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr021372 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr021372
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionTHO complex subunit 3
Genome locationtig00153661:852423..855624
RNA-Seq ExpressionSgr021372
SyntenySgr021372
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0000445 - THO complex part of transcription export complex (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR020472 - G-protein beta WD-40 repeat
IPR036322 - WD40-repeat-containing domain superfamily
IPR040132 - TREX component Tex1/THOC3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065764.1 THO complex subunit 3 [Cucumis melo var. makuwa]3.6e-17698.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+A  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

XP_004149572.1 THO complex subunit 3 [Cucumis sativus]3.6e-17698.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+A  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

XP_022155009.1 THO complex subunit 3 isoform X2 [Momordica charantia]1.6e-17698.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEEAALPFKNL SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVG YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTG+YIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

XP_022946738.1 THO complex subunit 3 [Cucurbita moschata]7.5e-17496.7Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+   FKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

XP_038905145.1 THO complex subunit 3 [Benincasa hispida]1.0e-17597.69Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+A  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

TrEMBL top hitse value%identityAlignment
A0A0A0L651 WD_REPEATS_REGION domain-containing protein1.7e-17698.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+A  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

A0A1S3BM38 THO complex subunit 31.7e-17698.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+A  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

A0A5D3BC11 THO complex subunit 31.7e-17698.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+A  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

A0A6J1DNX6 THO complex subunit 3 isoform X27.8e-17798.02Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEEAALPFKNL SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVG YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTG+YIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

A0A6J1KZA7 THO complex subunit 33.6e-17496.7Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE+   FKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADE
        ADE
Subjt:  ADE

SwissProt top hitse value%identityAlignment
P14197 WD repeat-containing protein AAC35.5e-6336.51Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIA
        ++ A+  F    ++++ G+KKK  SVAWN  G K+AS   D   RVW+ +P G                +  +K+ +ELKGH  S++++ W PK++DL+A
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIA

Query:  TASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY----
        +A  DK +++WD + GKC      + ENI++ + PDG  I    RDD L ++D+   K +   KFN  E+N++ W+  G++  +    G +E   +    
Subjt:  TASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY----

Query:  -PSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAM
           ++ L+TL  HTA  YC+  DP G Y A GSADS+VSLWDI  M+CV+TF K  +P R++SF++ G++IA++S +  I+I ++++ + +H I C + +
Subjt:  -PSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAM

Query:  NSVEWNPKHNLLAYA
        +S+ W+P   LLAYA
Subjt:  NSVEWNPKHNLLAYA

Q29RH4 THO complex subunit 39.1e-9051.72Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R+ KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA
        +LVSLWD+ +++CVR F++L+WPVRT+SF++ G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA

Q8VE80 THO complex subunit 39.1e-9051.72Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R+ KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA
        +LVSLWD+ +++CVR F++L+WPVRT+SF++ G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA

Q96J01 THO complex subunit 31.2e-8951.72Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R+ KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA
        +LVSLWD+ +++CVR F++L+WPVRT+SF++ G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA

Q9FKT5 THO complex subunit 31.8e-16287.83Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE  +PFK+LHSREYQGHKKKVHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDARSGK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        C+QQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+PL+TL AHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY
        P G YFAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFNY+GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY

Query:  QADE
          DE
Subjt:  QADE

Arabidopsis top hitse value%identityAlignment
AT3G49660.1 Transducin/WD40 repeat-like superfamily protein3.1e-1624Show/hide
Query:  LHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDV-ELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSG
        +HS+    H + V SV ++  G  LAS S D+T R + I        + V E  GH + +  + +    +  I +AS DKT++LWD  +G  S    L G
Subjt:  LHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDV-ELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSG

Query:  EN---INITYKPDGTHIAVGNRDDELTILDVR-----KFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLM-AHTAGCYCIAID
               + + P    I  G+ D+ + I DV      K  P H    +  V  + +N  G +   ++ +G   +    +   ++TL+         +   
Subjt:  EN---INITYKPDGTHIAVGNRDDELTILDVR-----KFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLM-AHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFT---KLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRA-AMNSVEWNPKHNLLAYAGDDK
        P G +  VG+ D+ + LW+IS    ++T+T     ++ + +      G+ I S SED  + +  + + + + ++      + +V  +P  NL+A    DK
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFT---KLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRA-AMNSVEWNPKHNLLAYAGDDK

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein3.5e-1223.29Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASA
        ++ + ++ +  +      +GT+++      + + TL  H + C  +   P G +FA GS D+ + +WDI +  C+ T+      V  + F   G +I S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASA

Query:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK
         ED  + + ++  G+ +H+       + S++++P   LLA    DK
Subjt:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK

AT5G25150.1 TBP-associated factor 55.8e-1525.1Show/hide
Query:  YQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVE-LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGEN---
        Y+GH   V    ++  G   AS S D+TAR+W ++     +++ +  + GH   VD + W P + + IAT S DKTVRLWD ++G+C +     G     
Subjt:  YQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVE-LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGEN---

Query:  INITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSA
        +++   PDG ++A G+ D                                         GT+ +    + R +  LM H +  + ++    G   A GSA
Subjt:  INITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSA

Query:  DSLVSLWDI----------------SQMLCVRTFTKLEWPVRTISFN
        D  V LWD+                +++  +RTF     PV  + F+
Subjt:  DSLVSLWDI----------------SQMLCVRTFTKLEWPVRTISFN

AT5G56130.1 Transducin/WD40 repeat-like superfamily protein1.3e-16387.83Show/hide
Query:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK
        MEE  +PFK+LHSREYQGHKKKVHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDARSGK
Subjt:  MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID
        C+QQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+PL+TL AHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY
        P G YFAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFNY+GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY

Query:  QADE
          DE
Subjt:  QADE

AT5G67320.1 WD-40 repeat family protein3.4e-2327.99Show/hide
Query:  HSREYQGHKKK-VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAEL-SG
        H++     K K V ++ WN  G  LA+GS D  AR+W +    +G++    L  H   +  L W+ K  D + T S D+T  +WD ++ +  QQ E  SG
Subjt:  HSREYQGHKKK-VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAEL-SG

Query:  ENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGG----
          +++ ++ +    A  + D  + +  + + +P         EVN + W+ TG +    + + T ++        +  L  HT   Y I   P G     
Subjt:  ENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGG----

Query:  -----YFAVGSADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA
               A  S DS V LWD  + +MLC  +F     PV +++F+  GEYIAS S D  I I +++ G+ V        +  V WN + N +A
Subjt:  -----YFAVGSADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGCTGCGCTGCCCTTTAAGAATCTTCACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTACATTCTGTGGCATGGAATTGCACGGGTATGAAGCTTGCTTC
CGGTTCTGTCGATCAAACTGCTCGAGTTTGGCATATTGAGCCTCACGGACATGGTAAGGTTAAGGATGTTGAGTTGAAAGGGCACACTGATAGTGTAGATCAGCTATGTT
GGGATCCTAAACATTCTGATCTTATAGCAACTGCGTCTGGGGACAAGACTGTTCGATTATGGGATGCTCGTAGTGGGAAATGCTCACAGCAAGCTGAGCTCAGTGGGGAG
AATATCAACATCACCTACAAACCAGATGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTCACAATACTGGATGTTAGGAAGTTTAAGCCAGTTCACAAGCGCAA
GTTCAATTACGAGGTAAATGAAATTGCTTGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAATGGTACTGTTGAAGTACTAGCATACCCATCACTTCGACCAC
TTGAAACTCTTATGGCTCATACAGCTGGTTGTTACTGTATTGCAATTGACCCAGTTGGAGGGTATTTTGCAGTTGGAAGTGCTGATTCATTAGTCAGCCTATGGGATATC
TCTCAGATGCTCTGCGTGCGAACATTTACAAAACTCGAATGGCCTGTCAGGACAATAAGTTTCAACTACACCGGAGAATACATTGCTTCTGCCAGTGAGGACTTGTTCAT
TGATATATCGAATGTTCAAACGGGAAGAACGGTCCATCAGATTCCTTGTCGGGCTGCGATGAACAGCGTGGAGTGGAATCCAAAACACAATTTACTTGCTTATGCTGGGG
ATGACAAGAACAAGTATCAGGCTGATGAAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGCTGCGCTGCCCTTTAAGAATCTTCACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTACATTCTGTGGCATGGAATTGCACGGGTATGAAGCTTGCTTC
CGGTTCTGTCGATCAAACTGCTCGAGTTTGGCATATTGAGCCTCACGGACATGGTAAGGTTAAGGATGTTGAGTTGAAAGGGCACACTGATAGTGTAGATCAGCTATGTT
GGGATCCTAAACATTCTGATCTTATAGCAACTGCGTCTGGGGACAAGACTGTTCGATTATGGGATGCTCGTAGTGGGAAATGCTCACAGCAAGCTGAGCTCAGTGGGGAG
AATATCAACATCACCTACAAACCAGATGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTCACAATACTGGATGTTAGGAAGTTTAAGCCAGTTCACAAGCGCAA
GTTCAATTACGAGGTAAATGAAATTGCTTGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAATGGTACTGTTGAAGTACTAGCATACCCATCACTTCGACCAC
TTGAAACTCTTATGGCTCATACAGCTGGTTGTTACTGTATTGCAATTGACCCAGTTGGAGGGTATTTTGCAGTTGGAAGTGCTGATTCATTAGTCAGCCTATGGGATATC
TCTCAGATGCTCTGCGTGCGAACATTTACAAAACTCGAATGGCCTGTCAGGACAATAAGTTTCAACTACACCGGAGAATACATTGCTTCTGCCAGTGAGGACTTGTTCAT
TGATATATCGAATGTTCAAACGGGAAGAACGGTCCATCAGATTCCTTGTCGGGCTGCGATGAACAGCGTGGAGTGGAATCCAAAACACAATTTACTTGCTTATGCTGGGG
ATGACAAGAACAAGTATCAGGCTGATGAAG
Protein sequenceShow/hide protein sequence
MEEAALPFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQQAELSGE
NINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPLETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDI
SQMLCVRTFTKLEWPVRTISFNYTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEX