CuGenDBv2

Gene ID	Sgr021373
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	RNA polymerase II elongation factor
Genome location	tig00153661:855819..858231
RNA-Seq Expression	Sgr021373
Synteny	Sgr021373
Gene Ontology terms	GO:0006414 - translational elongation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0003746 - translation elongation factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAF9667201.1 hypothetical protein SADUNF_Sadunf16G0308400 [Salix dunnii]

5.9e-74

66.52

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAH+VEIPVD EHQ  QKL  A+  I+AIQ HPL EIS SPGHLLLLKLWQREE LFGRRI+ +E+RMDS+++EIFQLCCFFL+FHG  LT+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWACFC
        SSVD++E   CKKWWIP      TS+VFV LVQVKV  YWK WRQLQRE+NDNRA+TRC+QELRMKG SF+LSKEP SGKRMKSSSVEIKW+PL W   C
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWACFC

Query:  SLQVHPLRVLVLGKIFRALQSLVAMADFEE
        S  +  + ++     F  +   V+ A F E
Subjt:  SLQVHPLRVLVLGKIFRALQSLVAMADFEE

PQQ15935.1 uncharacterized protein Pyn_32256 [Prunus yedoensis var. nudiflora]

3.7e-76

70.42

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSAI +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWAC--
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W    
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWAC--

Query:  -FCSLQVHPLRVL
            +++H +R+L
Subjt:  -FCSLQVHPLRVL

XP_007205859.1 uncharacterized protein LOC18772538 [Prunus persica]

5.4e-75

74.49

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSA+ +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW

XP_021826806.1 uncharacterized protein LOC110767541 [Prunus avium]

7.0e-75

74.49

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSA+ +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW

XP_031280483.1 uncharacterized protein LOC116138939 [Pistacia vera]

1.0e-73

73.47

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AE K DAHVVEIPVD EHQ K      +  I+AIQ HPL EISQSPGHLLLLKLWQR+E LFGRRI+ +E+RMDS+R+E+FQLCCFFLLFHGL LT+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW
        SSV+ ++E  CKKWWIP     +TS+VFV LVQVK++ YWK WRQLQRER DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+PL W
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW

TrEMBL top hits

e value

%identity

Alignment

A0A314Z724 Uncharacterized protein

1.8e-76

70.42

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSAI +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWAC--
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W    
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWAC--

Query:  -FCSLQVHPLRVL
            +++H +R+L
Subjt:  -FCSLQVHPLRVL

A0A5E4EWH6 PREDICTED: RNA polymerase II

2.6e-75

74.49

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSA+ +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW

A0A6A1VTX8 Uncharacterized protein

2.4e-73

65.49

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMIS-AIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLF
        AE+K DAH+VEI VD EHQ   KL +A++ IS AIQQHPL EIS+SPGHLLLLKLWQREE LFGRR++ +ETR+DS+R+E+FQLCCFF +FHG  LT+LF
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMIS-AIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLF

Query:  TSSVDAEEE--RVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWA
        +SSV+++EE  R CKKWWIPG   A+TS+VFV LVQVK++ YWK W QLQRERND+RA+TRCVQELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W 
Subjt:  TSSVDAEEE--RVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWA

Query:  ----------CFCSLQVHPLRVLVLG
                  CF  L +   + ++ G
Subjt:  ----------CFCSLQVHPLRVLVLG

A0A6P5THD5 uncharacterized protein LOC110767541

3.4e-75

74.49

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSA+ +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW

M5WCP6 Uncharacterized protein

2.6e-75

74.49

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Query:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT
        AEMK DAHVVEIPVD EHQ  QKLSSA+ +ISAIQ HPL EIS+SPGHLLLLKLW+REE LFGRRI+R+E+RMDS+R+EIFQLCCFFL+FHG  +T+LFT
Subjt:  AEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFT

Query:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW
        SSV++ EE +CKKWWIP     +TS VFV LVQV +  YWK W QLQRE+ DNRA+TRC+QELRMKG SF+LSKEPQSGKRMKSSSVEIKW+P+ W
Subjt:  SSVDAEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G12870.1 unknown protein

2.9e-26

38.54

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Query:  MISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLF---TSSVDAEEERVCKKWWIPGASMAATSV
        ++ A  +HPL +I+ +P H LLLK W +EE L   R+S +E+++DS+R+EI QL  FF LFH +SL LLF   +SS  +     CK+ WIP      +S+
Subjt:  MISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLF---TSSVDAEEERVCKKWWIPGASMAATSV

Query:  VFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPL-QWAC--FCSLQVHPLRVLVLGKI
          +  V+ K  V     + L+RE+ D + + +CV+EL+ KG  F+L KE  + +R KS  VE K  P+ +W+   F +L    +  LVL  I
Subjt:  VFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPL-QWAC--FCSLQVHPLRVLVLGKI

AT5G56120.1 unknown protein

1.7e-66

60.59

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Query:  DAHVVEIPVDHEHQQKQKLSSAIA-------MISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLL
        D+HVVEIPVD EH+++Q+    +A       ++  IQQHPL EIS+SPGHLLLLKLWQREE LF RR+  +E+R++S+++EIFQLCCFFL+FHG   TL+
Subjt:  DAHVVEIPVDHEHQQKQKLSSAIA-------MISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLL

Query:  FTSSVD-----AEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRP
        ++SS        +   VCKKWWIP A   ATS+V V LVQ K++V+WK +R + RERNDNR +TRCV ELRMKG SF+LSKEP SGKRMKSSSVEIKW+P
Subjt:  FTSSVD-----AEEERVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRP

Query:  LQW
        + W
Subjt:  LQW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGCTGAAATGAAAGACGATGCCCACGTAGTCGAAATCCCCGTCGACCACGAGCATCAGCAGAAACAGAAGCTTTCTTCCGCCATAGCCATGATCTCGGCCATCCA
ACAGCACCCATTACGGGAAATATCTCAGAGCCCCGGCCATCTCTTGCTCCTCAAGCTCTGGCAGAGAGAGGAACACCTCTTCGGCCGCCGGATCTCTCGCCGGGAAACCA
GAATGGACTCTCTACGGCAAGAAATATTCCAACTCTGCTGCTTCTTCCTGCTCTTCCACGGCCTCTCTCTTACCCTCTTGTTTACCTCCTCCGTCGACGCCGAGGAGGAG
CGTGTTTGCAAGAAATGGTGGATCCCTGGTGCGTCAATGGCGGCGACGTCGGTGGTGTTTGTGGCTCTGGTGCAGGTGAAGGTGTGGGTGTATTGGAAGACGTGGAGGCA
GTTGCAGAGGGAGCGGAACGACAACAGAGCAGTGACGAGATGTGTTCAAGAACTGAGGATGAAGGGGTGGAGCTTTAATCTGTCCAAGGAGCCGCAGAGTGGGAAGAGGA
TGAAGAGCTCTAGCGTGGAGATCAAATGGAGGCCTCTTCAATGGGCTTGTTTTTGCAGCCTCCAAGTTCATCCTTTGCGGGTTCTAGTTCTAGGTAAAATTTTCCGAGCT
TTGCAGAGCTTGGTGGCTATGGCGGATTTCGAAGAGAAGAGGCCATCAGAAAATGGGTTCTTTAGATCACCAATTGTTTTCAAAATCTCATTTTCAAATCACCAACCATA
CACAACCTATCGCCAACAATTGAAATTCAATG

mRNA sequence

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Protein sequence

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MAAEMKDDAHVVEIPVDHEHQQKQKLSSAIAMISAIQQHPLREISQSPGHLLLLKLWQREEHLFGRRISRRETRMDSLRQEIFQLCCFFLLFHGLSLTLLFTSSVDAEEE
RVCKKWWIPGASMAATSVVFVALVQVKVWVYWKTWRQLQRERNDNRAVTRCVQELRMKGWSFNLSKEPQSGKRMKSSSVEIKWRPLQWACFCSLQVHPLRVLVLGKIFRA
LQSLVAMADFEEKRPSENGFFRSPIVFKISFSNHQPYTTYRQQLKFNX

Sgr021373 (gene) of Monk fruit (Qingpiguo) v1 genome