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Sgr021993 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr021993
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptiondiphthamide biosynthesis protein 3-like
Genome locationtig00153870:457489..459706
RNA-Seq ExpressionSgr021993
SyntenySgr021993
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR007872 - DPH-type metal-binding domain
IPR036671 - DPH-type metal-binding domain superfamily
IPR044248 - Diphthamide biosynthesis protein 3/4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022429.1 DPH3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-4584.21Show/hide
Query:  LRQFSSSTG---GCRLAVAAKSAESTGATMSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNN
        L Q SSST    GCRLA+AAK AES+  TMSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFLGDS QKNN
Subjt:  LRQFSSSTG---GCRLAVAAKSAESTGATMSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNN

Query:  KGLEPSKQQLIAVA
         GLEPSKQ+   VA
Subjt:  KGLEPSKQQLIAVA

XP_008454889.1 PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo]6.6e-3991.76Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFL DS+QKNNKGLEPSKQ  I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

XP_022136247.1 diphthamide biosynthesis protein 3-like [Momordica charantia]2.7e-4092.94Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKG++PSKQQ I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

XP_022972367.1 diphthamide biosynthesis protein 3-like [Cucurbita maxima]2.7e-4094.12Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFLGDSD KNNKGL+PSKQQ I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

XP_038887330.1 diphthamide biosynthesis protein 3-like [Benincasa hispida]1.2e-4095.29Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFLGDS+QKNNKGLEPSKQQ I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

TrEMBL top hitse value%identityAlignment
A0A1S3BZL5 diphthamide biosynthesis protein 3-like3.2e-3991.76Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFL DS+QKNNKGLEPSKQ  I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

A0A5A7SJN1 Diphthamide biosynthesis protein 3-like3.2e-3991.76Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDM+WNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFL DS+QKNNKGLEPSKQ  I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

A0A6J1C519 diphthamide biosynthesis protein 3-like1.3e-4092.94Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWN+ELQA+TYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKG++PSKQQ I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

A0A6J1EZW6 diphthamide biosynthesis protein 3-like9.3e-3991.76Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFLGDS QKNN GLEPSKQ+   VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

A0A6J1I4L9 diphthamide biosynthesis protein 3-like1.3e-4094.12Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDL+LGEEIARCPSCSLYITVIYNMEDFLGDSD KNNKGL+PSKQQ I VA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA

SwissProt top hitse value%identityAlignment
Q21102 DPH3 homolog3.3e-1759.02Show/hide
Query:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFL
        +D+VEIED E++EE   + YPCPCGD F+I +E L +GE++A+CPSCSL I VIY+ EDF+
Subjt:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFL

Q4P8G2 Diphthamide biosynthesis protein 31.9e-1745.24Show/hide
Query:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFL-GDSDQKNNKGLEPSKQQLIAVA
        YD++E+EDM +++E   F YPCPCGD F+IT++ L+  E++ARCPSCSL I V+++  DF  GD D+     ++ + Q + A A
Subjt:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFL-GDSDQKNNKGLEPSKQQLIAVA

Q6CMG4 Diphthamide biosynthesis protein 34.3e-1750.6Show/hide
Query:  SYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAV
        +YD+VEIEDM ++ + Q FTYPCPCGD FQI+ +D+  GE+IA CPSCSL I V+++ ED +    + N   LEP  +  +AV
Subjt:  SYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAV

Q6VUC1 DPH3 homolog5.7e-1757.38Show/hide
Query:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFL
        +D+VEIED +++E+ + + YPCPCGD F ITKEDL  GE++A CPSCSL I VIY+ + F+
Subjt:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFL

Q9VGQ9 DPH3 homolog5.1e-1857.35Show/hide
Query:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKN
        +D+VEIED E++EE + + YPCPCGD FQI+KE+L  GEE+A CPSCSL I VIY+ E F  + D+++
Subjt:  YDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKN

Arabidopsis top hitse value%identityAlignment
AT2G15910.1 CSL zinc finger domain-containing protein8.9e-3479.52Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIA
        MSYDDVEIEDMEWNEE+QA+TYPCPCGDLFQITKEDLRLGEEIA CPSCSLYITVIYNMEDF  D+ +KNN   EP  +  +A
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIA

AT2G15910.2 CSL zinc finger domain-containing protein8.1e-3580Show/hide
Query:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA
        MSYDDVEIEDMEWNEE+QA+TYPCPCGDLFQITKEDLRLGEEIA CPSCSLYITVIYNMEDF  D+ +KNN   EP  +  +AVA
Subjt:  MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGAGAGGGGAATTCGTTGGATTTATAAAGAAAGAGAAGAGATAGAGATAGAGATAGAGATGTGGCGACTCTGTGTGTGTAAGCGAAGCGGGACGAGACGAGA
GGCGCACACAGTTCTGCAGTGGGCACACGAGTCCAAACGAACCAAATTTCTCGCCTTTCCTCTTCGTCAATTTTCTTCGTCTACCGGCGGTTGCAGACTCGCCGTCGCCG
CCAAATCGGCCGAATCGACGGGAGCAACGATGTCGTACGACGACGTGGAGATAGAAGATATGGAGTGGAACGAGGAACTGCAGGCCTTCACGTACCCATGCCCCTGCGGC
GACTTGTTCCAGATCACGAAGGAGGATCTTAGGCTCGGAGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACAGTCATCTACAACATGGAAGATTTTCTCGG
AGACTCTGATCAGAAGAATAACAAAGGACTTGAGCCCTCCAAACAACAGCTTATCGCGGTCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGGAGAGGGGAATTCGTTGGATTTATAAAGAAAGAGAAGAGATAGAGATAGAGATAGAGATGTGGCGACTCTGTGTGTGTAAGCGAAGCGGGACGAGACGAGA
GGCGCACACAGTTCTGCAGTGGGCACACGAGTCCAAACGAACCAAATTTCTCGCCTTTCCTCTTCGTCAATTTTCTTCGTCTACCGGCGGTTGCAGACTCGCCGTCGCCG
CCAAATCGGCCGAATCGACGGGAGCAACGATGTCGTACGACGACGTGGAGATAGAAGATATGGAGTGGAACGAGGAACTGCAGGCCTTCACGTACCCATGCCCCTGCGGC
GACTTGTTCCAGATCACGAAGGAGGATCTTAGGCTCGGAGAAGAGATTGCTCGGTGCCCTAGCTGCTCTCTTTACATCACAGTCATCTACAACATGGAAGATTTTCTCGG
AGACTCTGATCAGAAGAATAACAAAGGACTTGAGCCCTCCAAACAACAGCTTATCGCGGTCGCTTAA
Protein sequenceShow/hide protein sequence
MVKERGIRWIYKEREEIEIEIEMWRLCVCKRSGTRREAHTVLQWAHESKRTKFLAFPLRQFSSSTGGCRLAVAAKSAESTGATMSYDDVEIEDMEWNEELQAFTYPCPCG
DLFQITKEDLRLGEEIARCPSCSLYITVIYNMEDFLGDSDQKNNKGLEPSKQQLIAVA