| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_022143510.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Momordica charantia] | 0.0e+00 | 92.43 | Show/hide |
Query: MIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKV
MIHMEDE+D EL IPSGL++GV FSVSTQEDTENISVI+VDA GEVSDPKLGLPNPSYQCSTCG++VLKCCEGHFG I+FPFTIIHPYFLSEVAQVLNKV
Subjt: MIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKV
Query: CPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
CPGCKTIRQELWGKVEDPTS+YHRPKGCRYCFGSLKEWYPPM+FKLSS+DMFRKS++MVEVKENMSKKYQKRVARGGLPPDYW+FIPKDEQQEESYCRPN
Subjt: CPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
Query: RKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
RKILTHAQVRYLLKDIDPKFLKKFV +TDSLFLNCFPVTPNCHRV+EM HSFSNGQRL+FDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
Subjt: RKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
Query: KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRV
KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS WNMKKLSTSCYLHLVEKGEI+VRRGGRLVRV
Subjt: KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRV
Query: RHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
R+VLELNMGDTIYRPLADRDVVL+NRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSL+RQLINGQSGRN
Subjt: RHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
Query: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNL
LLSLSHDSLTAAHLIMEDGVSLN+F+MQQLQMLALHQL PAIVKAP+LRSC WTGKQLFSI LP DFDYSSP+HCVYI+NGELISSEGSYWLRDTGRNL
Subjt: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNL
Query: FQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLC
FQALIEHC+GK LDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDS+KDIL AGD+EGNQNVLSIAVE LC
Subjt: FQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLC
Query: YEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRT
+EKQKS LNQASVDAFKKVFRDIQNLVYKYSSKDNSLL M KAGSKGNLLKLVQH MCLGLQHSLVPLSFGLPH+L+CSAWNSQK PCYI+KDGL RT
Subjt: YEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRT
Query: QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNV
QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDG+VRNAYGNQLVQFSYDIDR S +SNE E++ AN V
Subjt: QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNV
Query: IGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
GG PVGSLAACAISEAAYSALDQPISLLEASPLLNLK
Subjt: IGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| XP_023005247.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Cucurbita maxima] | 0.0e+00 | 88.75 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
M+ A R GQ+ M HMEDE+D EL IPSG+L GV FSVSTQ+D ENI+VI ++AA EVSDPKLGLPNPSYQC+TCG++VLKCCEGHFG IKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
YFLSEVAQVLNKVCPGCK+IR+ELWGKVEDPTS++HRPKGCRYCFGSLK+WYPPMRFKLS+TDMFRKSM+MVEVKENMSKKYQKRVARGGLPPDYW+FIP
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
Query: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
KDEQQEESYCRPNRK+LTHAQV YLLKDIDPKFLKKFVS TDSLFLN FPVTPNCHRVTEMTHSFS+GQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Subjt: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Query: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
LKISKLSPEKL+SKDL+YQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYL LVEKG
Subjt: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
Query: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
EI+VRR GRLVRVRHVLEL+MGDTIYRPLAD DVVL+NRPPSIHQHSLIALSV+VLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELV+
Subjt: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
Query: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
LDRQL+NGQSGRNLLSLSHDSLTAAHLIMEDGVSLN+F++QQLQM ALHQLLPPAIVKAP+ RSC WTGKQLFSI LP DFDYSSPSH V+IKNGEL+SS
Subjt: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
Query: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
EGSYWLRDTGRN FQALIEHCEG L+ L AQ VLCEWLSMRGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQEAEETCNL QLMVDSHKD L+ GDDEG
Subjt: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
Query: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
NQ+VLSI VE L YEKQKSA LNQASVDAFK+VFR+IQNLVYKYS KDNSLL M KAGSKGNLLKLVQH MCLGLQHSLV LSFGLPHKL+CS+WNSQK
Subjt: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
Query: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
P YIRKDGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIYNAYDG+VRNAYGNQLVQFSYD D SPTS+S
Subjt: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
Query: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
NEL GEN+N N IGGQPVGSLAACAISEAAYSALDQPISLLE SPLLNLK
Subjt: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| XP_038905038.1 DNA-directed RNA polymerase IV subunit 1 isoform X1 [Benincasa hispida] | 0.0e+00 | 89.38 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
MS A D +P Q+VMIHMEDE+DGEL IPSGLLTG+ FSV+TQ+DTENI+V+TVDAA EVSDPKLGLPNPSYQC+TCG++ LK CEGHFGVIKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
YFLSEVAQVLNKVCPGCK+IRQELWGKVEDPTS+YHRPKGCRYCFGSLK+WYPPMRFKLS+TDMFRKSM+MVEVKENMSKKYQK+VA+GGLP DYW+FIP
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
Query: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
KDEQQEESYCRPNRKILTHAQV YLLKDIDPKFLKKFV TDSLFLN FPVTPN HRVTE+THSFSNGQRL+FDERTRAYKK+VDFRGTANELGSR+LDC
Subjt: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Query: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
LKISKLSPEKLQSKDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYL+LV KG
Subjt: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
Query: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
EI+VRR GRLVRVR+VLELNMGDTIYRPLAD DVVL+NRPPSIHQHSLIAL VK+LPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVE+RELVS
Subjt: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
Query: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLN F+MQQLQMLALHQLLPPAIVKAP R+C WTGKQLFSILLP DFDYSSPSH V+IKNGELISS
Subjt: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
Query: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
EGSYWLRD+GRNLFQALIEHCEGK LD L DAQGVLCEWLSMRGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDIL+ G+DE
Subjt: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
Query: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
NQ++LSI +E L YEKQKS LNQASVDAFKKVFRDIQNLVYKYS KDNSLL M KAGSKGNLLKLVQH MCLGLQHSLV LSF LPHKL+CSAWNSQK
Subjt: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
Query: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
P YI+KDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIY AYDG+VRNAYGNQLVQFSYDIDR PTSVS
Subjt: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
Query: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
NEL EN+N + IGG PVGSLAACA+SEAAYSALDQPISLLEASPLLNLK
Subjt: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| XP_038905042.1 DNA-directed RNA polymerase IV subunit 1 isoform X2 [Benincasa hispida] | 0.0e+00 | 89.87 | Show/hide |
Query: MIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKV
MIHMEDE+DGEL IPSGLLTG+ FSV+TQ+DTENI+V+TVDAA EVSDPKLGLPNPSYQC+TCG++ LK CEGHFGVIKFP+TIIHPYFLSEVAQVLNKV
Subjt: MIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKV
Query: CPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
CPGCK+IRQELWGKVEDPTS+YHRPKGCRYCFGSLK+WYPPMRFKLS+TDMFRKSM+MVEVKENMSKKYQK+VA+GGLP DYW+FIPKDEQQEESYCRPN
Subjt: CPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
Query: RKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
RKILTHAQV YLLKDIDPKFLKKFV TDSLFLN FPVTPN HRVTE+THSFSNGQRL+FDERTRAYKK+VDFRGTANELGSR+LDCLKISKLSPEKLQS
Subjt: RKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
Query: KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRV
KDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYL+LV KGEI+VRR GRLVRV
Subjt: KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRV
Query: RHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
R+VLELNMGDTIYRPLAD DVVL+NRPPSIHQHSLIAL VK+LPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVE+RELVSLDRQLINGQSGRN
Subjt: RHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
Query: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNL
LLSLSHDSLTAAHLIMEDGVSLN F+MQQLQMLALHQLLPPAIVKAP R+C WTGKQLFSILLP DFDYSSPSH V+IKNGELISSEGSYWLRD+GRNL
Subjt: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNL
Query: FQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLC
FQALIEHCEGK LD L DAQGVLCEWLSMRGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDIL+ G+DE NQ++LSI +E L
Subjt: FQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLC
Query: YEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRT
YEKQKS LNQASVDAFKKVFRDIQNLVYKYS KDNSLL M KAGSKGNLLKLVQH MCLGLQHSLV LSF LPHKL+CSAWNSQK P YI+KDGLPDRT
Subjt: YEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRT
Query: QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNV
QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIY AYDG+VRNAYGNQLVQFSYDIDR PTSVSNEL EN+N +
Subjt: QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNV
Query: IGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
IGG PVGSLAACA+SEAAYSALDQPISLLEASPLLNLK
Subjt: IGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| XP_038905045.1 DNA-directed RNA polymerase IV subunit 1 isoform X4 [Benincasa hispida] | 0.0e+00 | 89.38 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
MS A D +P Q+VMIHMEDE+DGEL IPSGLLTG+ FSV+TQ+DTENI+V+TVDAA EVSDPKLGLPNPSYQC+TCG++ LK CEGHFGVIKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
YFLSEVAQVLNKVCPGCK+IRQELWGKVEDPTS+YHRPKGCRYCFGSLK+WYPPMRFKLS+TDMFRKSM+MVEVKENMSKKYQK+VA+GGLP DYW+FIP
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
Query: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
KDEQQEESYCRPNRKILTHAQV YLLKDIDPKFLKKFV TDSLFLN FPVTPN HRVTE+THSFSNGQRL+FDERTRAYKK+VDFRGTANELGSR+LDC
Subjt: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Query: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
LKISKLSPEKLQSKDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYL+LV KG
Subjt: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
Query: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
EI+VRR GRLVRVR+VLELNMGDTIYRPLAD DVVL+NRPPSIHQHSLIAL VK+LPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVE+RELVS
Subjt: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
Query: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLN F+MQQLQMLALHQLLPPAIVKAP R+C WTGKQLFSILLP DFDYSSPSH V+IKNGELISS
Subjt: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
Query: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
EGSYWLRD+GRNLFQALIEHCEGK LD L DAQGVLCEWLSMRGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDIL+ G+DE
Subjt: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
Query: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
NQ++LSI +E L YEKQKS LNQASVDAFKKVFRDIQNLVYKYS KDNSLL M KAGSKGNLLKLVQH MCLGLQHSLV LSF LPHKL+CSAWNSQK
Subjt: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
Query: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
P YI+KDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIY AYDG+VRNAYGNQLVQFSYDIDR PTSVS
Subjt: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
Query: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
NEL EN+N + IGG PVGSLAACA+SEAAYSALDQPISLLEASPLLNLK
Subjt: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L2L4 DNA-directed RNA polymerase | 0.0e+00 | 88.43 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
MSS D RPGQ+VMIHMEDE+DGEL IPSGLLTG+ FSVS Q+D ENI+VITVDAA EVSDPKLGLPNPSYQC+TCG++ LK CEGHFGVIKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
YFLSEVAQVLNKVCPGCK++RQELWGKVEDPTS+Y+RPKGCRYCFGSLK+WYPPMRFKLS+TDMF+KSM+MVEVKENMSKKYQKRVA+GGLP DYW FIP
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
Query: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
KDEQQEESYCRPNRKILTHAQV YLLKDIDPKFLKKFV DSLFLN FPVTPN HRVTEM HSFSNGQRL+FDERTRAYKK+VDFRGTANELGSRVLDC
Subjt: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Query: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
LKISKLSPEKLQ+KDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYLHLVEKG
Subjt: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
Query: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
EIYVRR GRLVRVR+VLELNMGDTIYRPLAD D+VL+NRPPSIHQHSLIALSVK+LPVS+VLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVE+RELVS
Subjt: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
Query: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
LD+QL NGQSGRNLLSLSHDSLTAAHLI+EDGVSLN+F+MQQLQML LHQLLPPAIVK+P LR+C WTGKQLFSILLP DFDYSSPSH V+I+ GELISS
Subjt: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
Query: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
EGSYWLRD+GRNLFQALIEHCEGK LD LRDAQGVLCEWLS RGLSVSLSDLYLSVDSYSH+NMMDDIFCGLQEAEETCNLKQLMVDSHK+IL G+DE
Subjt: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
Query: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
NQ++LSIAVE L YEKQKSA LNQASVDAFKKVFRDIQNLVYKYS KDNSLL M KAGSKGNL+KLVQH MCLGLQHSLV LSF LPHKL+C+AWNSQK
Subjt: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
Query: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
P YI+KDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIY AYDG+VRNAYGNQLVQF YDIDR PTS S
Subjt: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
Query: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
EN+N + IGG PVGSLAACAISEAAYSALDQPISLLEASPLLNLK
Subjt: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| A0A5D3D780 DNA-directed RNA polymerase | 0.0e+00 | 86.61 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
MSSA D RPGQ+VMIHMEDE+DGEL IPSG LTG+ FSVS Q+D ENI+VITVDAA EVSDPKLGLPNPSYQC+TCG++ LK CEGHFGVIKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGK---------------------VEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMS
YFLSEVAQVLNKVCPGCK+IRQELWGK VEDPTS+Y+RPKGCRYCFGSLK+WYPPMRFKLS+TDMF+KSM+MVEVKENMS
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGK---------------------VEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMS
Query: KKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRA
KKYQKRVA+GGLP DYW FIPKDEQQEESYCRPNRKILTHAQV YLLKDIDPKFLKKFV DSLFLN FPVTPN HRVTEM HSFSNGQRL+FDERTRA
Subjt: KKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRA
Query: YKKLVDFRGTANELGSRVLDCLKISK------LSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAER
YKK+VDFRGTANELGSRVLDCLKISK LSPEKLQSKDLVYQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAER
Subjt: YKKLVDFRGTANELGSRVLDCLKISK------LSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAER
Query: LQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFR
LQISEHLS+WNMKKLSTSCYLHLVEKGEIYVRR GRLVRVR+VLELNMGDTIYRPLAD DVVL+NRPPSIHQHSLIALSVK+LPVS+VLSLNPLCCSPFR
Subjt: LQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFR
Query: GDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLF
GDFDGDCLHGYVPQSLEARVE+RELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI+EDGVSLN+F+MQQLQML LHQLLPPAIVK+P LR+C WTGKQLF
Subjt: GDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLF
Query: SILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQ
SILLP DF+YSSPSH V+I+ GELISSEGSYWLRD+GRNLFQALIEHCEGK LD LRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQ
Subjt: SILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQ
Query: EAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCL
EAEETCNLKQLMVDSHK+IL+ G+DE NQ++LSIAVE L YEKQKSA LNQASVDAFKKVFRDIQNLV+KYS KDNSLL M KAGSKGNL+KLVQH MCL
Subjt: EAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCL
Query: GLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYD
GLQHSLV LSF LPHKL+CSAWNSQK P YI++DGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIY AYD
Subjt: GLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYD
Query: GSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
G+VRNAYGNQLVQF YDIDR PTSVS+E EN N + IGG PVGSLAACA SEAAYSALDQPISLLEASPLLNLK
Subjt: GSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| A0A6J1CP02 DNA-directed RNA polymerase | 0.0e+00 | 92.43 | Show/hide |
Query: MIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKV
MIHMEDE+D EL IPSGL++GV FSVSTQEDTENISVI+VDA GEVSDPKLGLPNPSYQCSTCG++VLKCCEGHFG I+FPFTIIHPYFLSEVAQVLNKV
Subjt: MIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKV
Query: CPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
CPGCKTIRQELWGKVEDPTS+YHRPKGCRYCFGSLKEWYPPM+FKLSS+DMFRKS++MVEVKENMSKKYQKRVARGGLPPDYW+FIPKDEQQEESYCRPN
Subjt: CPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
Query: RKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
RKILTHAQVRYLLKDIDPKFLKKFV +TDSLFLNCFPVTPNCHRV+EM HSFSNGQRL+FDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
Subjt: RKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQS
Query: KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRV
KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS WNMKKLSTSCYLHLVEKGEI+VRRGGRLVRV
Subjt: KDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRV
Query: RHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
R+VLELNMGDTIYRPLADRDVVL+NRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSL+RQLINGQSGRN
Subjt: RHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
Query: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNL
LLSLSHDSLTAAHLIMEDGVSLN+F+MQQLQMLALHQL PAIVKAP+LRSC WTGKQLFSI LP DFDYSSP+HCVYI+NGELISSEGSYWLRDTGRNL
Subjt: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISSEGSYWLRDTGRNL
Query: FQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLC
FQALIEHC+GK LDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDS+KDIL AGD+EGNQNVLSIAVE LC
Subjt: FQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLC
Query: YEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRT
+EKQKS LNQASVDAFKKVFRDIQNLVYKYSSKDNSLL M KAGSKGNLLKLVQH MCLGLQHSLVPLSFGLPH+L+CSAWNSQK PCYI+KDGL RT
Subjt: YEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRT
Query: QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNV
QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDG+VRNAYGNQLVQFSYDIDR S +SNE E++ AN V
Subjt: QSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNANNV
Query: IGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
GG PVGSLAACAISEAAYSALDQPISLLEASPLLNLK
Subjt: IGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| A0A6J1FKU9 DNA-directed RNA polymerase | 0.0e+00 | 88.33 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
M+ A R GQ+ M HMEDE+D EL IPSG+L GV FSVSTQ+D ENI+VI ++AA EVSDPKLGLPNPSYQC+TCG++VLKCCEGHFG IKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
YFLSEVAQVLNKVCPGCK+IR+ELWGKVEDPTS++HRPKGCRYCFGSLK+WYPPMRFKLS+TDMFRKSM+MVEVKENMSKKYQKRVARGGLPPDYW+FIP
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
Query: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
KDEQQEESYCRPNRK+LTHAQV YLLKDIDPKFLKKFVS TDSLFLN FPVTPNCHRVTEMTHSFS+GQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Subjt: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Query: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
LKISKLSPEKL+SKDL+YQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYL LVEKG
Subjt: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
Query: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
EI+VRR GRLVRVRHVLEL+MGDTIYRPLAD DVVL+NRPPSIHQHSLIALSV+VLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELV+
Subjt: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
Query: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
LDRQL+NGQSGRNLLSLSHDSLTAAHLIMEDGVSLN+F++QQLQM ALHQLLPPAIVKAP+ RSC WTGKQLFSI LP DFDYSSPSH V+IKNGEL+SS
Subjt: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
Query: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
EGSYWLRDTGRN FQALIEHCEG+ L+ L AQ VLCEWLSMRGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQEAEETCNL QLMVDSHKD+L+ GDDEG
Subjt: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
Query: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
NQ+VLSI VE L YEKQKSA LNQASVDAFK+VFR+IQNLVYKYS KDNSLL M KAGSKGNLLKLVQH MCLGLQHSLV LSFGLPHKL+CS+WNSQK
Subjt: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
Query: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
P YI+KDGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIYNAYD +VRNAYGNQLVQFSYD D SP S S
Subjt: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
Query: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
NEL GEN+N N IGGQPVGSLAACA+SEAAYSALDQPISLLE SPLLNLK
Subjt: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| A0A6J1KSL8 DNA-directed RNA polymerase | 0.0e+00 | 88.75 | Show/hide |
Query: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
M+ A R GQ+ M HMEDE+D EL IPSG+L GV FSVSTQ+D ENI+VI ++AA EVSDPKLGLPNPSYQC+TCG++VLKCCEGHFG IKFP+TIIHP
Subjt: MSSARDVRPGQQVMIHMEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHP
Query: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
YFLSEVAQVLNKVCPGCK+IR+ELWGKVEDPTS++HRPKGCRYCFGSLK+WYPPMRFKLS+TDMFRKSM+MVEVKENMSKKYQKRVARGGLPPDYW+FIP
Subjt: YFLSEVAQVLNKVCPGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIP
Query: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
KDEQQEESYCRPNRK+LTHAQV YLLKDIDPKFLKKFVS TDSLFLN FPVTPNCHRVTEMTHSFS+GQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Subjt: KDEQQEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDC
Query: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
LKISKLSPEKL+SKDL+YQQKKIKDTATSS GLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLS+WNMKKLSTSCYL LVEKG
Subjt: LKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG
Query: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
EI+VRR GRLVRVRHVLEL+MGDTIYRPLAD DVVL+NRPPSIHQHSLIALSV+VLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELV+
Subjt: EIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVS
Query: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
LDRQL+NGQSGRNLLSLSHDSLTAAHLIMEDGVSLN+F++QQLQM ALHQLLPPAIVKAP+ RSC WTGKQLFSI LP DFDYSSPSH V+IKNGEL+SS
Subjt: LDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELISS
Query: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
EGSYWLRDTGRN FQALIEHCEG L+ L AQ VLCEWLSMRGLSVSLSDLYLSVDS+SHKNMMDDIFCGLQEAEETCNL QLMVDSHKD L+ GDDEG
Subjt: EGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEG
Query: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
NQ+VLSI VE L YEKQKSA LNQASVDAFK+VFR+IQNLVYKYS KDNSLL M KAGSKGNLLKLVQH MCLGLQHSLV LSFGLPHKL+CS+WNSQK
Subjt: NQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKK
Query: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
P YIRKDGL DRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTR+LTFLMRDIYNAYDG+VRNAYGNQLVQFSYD D SPTS+S
Subjt: PCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVS
Query: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
NEL GEN+N N IGGQPVGSLAACAISEAAYSALDQPISLLE SPLLNLK
Subjt: NELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P11414 DNA-directed RNA polymerase II subunit RPB1 | 4.4e-50 | 24.34 | Show/hide |
Query: GEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGC-KTIRQELWGKVED------------PTSNYHRPKGCRY
G + DP+ G+ + +C TC N+ + C GHFG I+ + H FL + +VL VC C K + K++D T Y KG
Subjt: GEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGC-KTIRQELWGKVED------------PTSNYHRPKGCRY
Query: CFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLP-PDYWSFIPKDEQQEESYCRPNRKILTHAQV---RYLLKDIDPKFLKKFVS
C G M K L E +YQ R+ R GL W + +D Q+++ P R ++ + ++P++ +
Subjt: CFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLP-PDYWSFIPKDEQQEESYCRPNRKILTHAQV---RYLLKDIDPKFLKKFVS
Query: VTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDF-----RGTANELGSRVL-DCLKISKLSPEKLQSKDLVYQQKKIKDTATSSCGL
+ + + PV P R + + Q D+ T +V R N + V+ + +K+ + + +L + ++ + L
Subjt: VTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDF-----RGTANELGSRVL-DCLKISKLSPEKLQSKDLVYQQKKIKDTATSSCGL
Query: RW--------IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG-------EIYVRRGGRLVRVR----
+ ++ ++GKR D R V+ DPN+ + ++G+P +A + +E ++ +N+ +L LV +G + +R G + +R
Subjt: RW--------IKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKG-------EIYVRRGGRLVRVR----
Query: -HVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
L L G + R + D D+V+ NR P++H+ S++ V++LP S+ LN +P+ DFDGD ++ ++PQSLE R E++EL + R ++ QS R
Subjt: -HVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRN
Query: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLAL---HQLLPPAIVKAPTLRSCVWTGKQLFSILLP------------------ADFDYSSPSHC-VY
++ + D+LTA + V L E+ L M ++ PAI+K L WTGKQ+FS+++P + + SP V
Subjt: LLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLAL---HQLLPPAIVKAPTLRSCVWTGKQLFSILLP------------------ADFDYSSPSHC-VY
Query: IKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILR----DAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVD
++NGELI G + G + + DI R + Q V+ WL + G ++ + D DS +++++ + I Q+ E ++
Subjt: IKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILR----DAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVD
Query: SHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQH-SLVPLSFGL
+H + L GN +E Q + LN DA K Q + +Y N+ +M +G+KG+ + + Q +G Q+ + FG
Subjt: SHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQH-SLVPLSFGL
Query: PHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQL
H+ P +I+ D P+ VENS+L+GL P E F H++ R+ + G + RRL M + YD +VRN+ NQ+
Subjt: PHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQL
Query: VQFSYDID
VQ Y D
Subjt: VQFSYDID
|
|
| P35084 DNA-directed RNA polymerase II subunit rpb1 | 6.8e-51 | 24.17 | Show/hide |
Query: VTFSVSTQEDTENISVITVD----------AAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGCK------
V F + + ++ N+SV V+ AG + DP +G + + +C TC S + C GHFG I+ + H F+ V ++L VC C
Subjt: VTFSVSTQEDTENISVITVD----------AAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGCK------
Query: ---TIRQELWGKVEDPTSNYHRPKGC----RYC-FGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLP----PDYWSFIPKDEQQE
+ RQ L K+ + + C + C G +E LS TD E + K + LP D + + +
Subjt: ---TIRQELWGKVEDPTSNYHRPKGC----RYC-FGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLP----PDYWSFIPKDEQQE
Query: ESYCRPNRKILTHAQVRYLLKDIDPKFLKKF-----VSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLV---------DFRGTANE
ES + +L+ +V +LK I + + + D + PV P R + M + + G+ D+ T +V + G
Subjt: ESYCRPNRKILTHAQVRYLLKDIDPKFLKKF-----VSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLV---------DFRGTANE
Query: LGSRVLDCLKISKLSPEKLQSKDLVYQQ-------KKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNM
+ + L+ + + L Q K I+ G I+ ++GKR D R V+ DPN+ + ++G+P +A L E ++ +N+
Subjt: LGSRVLDCLKISKLSPEKLQSKDLVYQQ-------KKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNM
Query: KKLSTSCYLHLVEKG-------EIYVRRGGRLVRVRHV-----LELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFR
K+ L+ G + +R G +R V L G + R + D DVV+ NR PS+H+ S++ +KV+P S+ LN SP+
Subjt: KKLSTSCYLHLVEKG-------EIYVRRGGRLVRVRHV-----LELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFR
Query: GDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHL------IMEDGVSLNVFEMQQLQMLAL--HQLLPPAIVKAPTLRSC
DFDGD ++ +VPQ+LE R E+ E++ + RQ+++ QS R ++ + D+L + L ME + +N+ L L ++ PPAI+K L
Subjt: GDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHL------IMEDGVSLNVFEMQQLQMLAL--HQLLPPAIVKAPTLRSC
Query: VWTGKQLFSILLP--------ADFDYSSPSHC------VYIKNGELISSEGSYWLRD----TGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSV
WTGKQLFS+++P + + P+ C V I+ GEL++ G R G + + EH + Q V+ WL RG ++
Subjt: VWTGKQLFSILLP--------ADFDYSSPSHC------VYIKNGELISSEGSYWLRD----TGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSV
Query: SLSDLY--------LSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQN
+ D +++ S KN + ++ Q + C + ++++ +E++ + LN+A A +
Subjt: SLSDLY--------LSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQN
Query: LVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQH---SLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECF
S+DN+L AM AGSKG+ + + Q C+G Q+ +P F S+ P + + D P+ VENS+L GL P E F
Subjt: LVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQH---SLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECF
Query: AHSVTNRDSSFSDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNE
H++ R+ + G + RRL M D+ YD +VRN+ G+ ++QF+Y D V N+
Subjt: AHSVTNRDSSFSDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNE
|
|
| P36594 DNA-directed RNA polymerase II subunit rpb1 | 3.2e-56 | 24.4 | Show/hide |
Query: IPSGLLTGVTFSVSTQEDTENISVI------TVDAAGE------VSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVC
+P + V F + + E+ ++SV T+D +G+ + DP+LG + ++C TCG + C GHFG I+ + H FLS++ ++L VC
Subjt: IPSGLLTGVTFSVSTQEDTENISVI------TVDAAGE------VSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVC
Query: PGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSS-TDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
C ++ + + T Y PK ++ + LS+ +D F S + Q + + GL W + + + + P
Subjt: PGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSS-TDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPN
Query: RKILTHAQVRYLL-----KDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSP
+++L+ +V + +D+ L + + D + + PV P R + S G+ D+ T ++ +S+
Subjt: RKILTHAQVRYLL-----KDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSP
Query: EKLQSKDLVYQQKKI--KDTATSSCGLRWIKDV--------------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSC
+ LQ Y +I + A G R +K + ++GKR D R V+ GDPN+ L E+G+P +A+ L E ++ +N+ +L
Subjt: EKLQSKDLVYQQKKI--KDTATSSCGLRWIKDV--------------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSC
Query: YLHLVEKG-------EIYVRRGGRLVRVRH-----VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDC
LV G + +R G + +R+ + L G + R + D DVV+ NR PS+H+ S++ ++V+P S+ LN SP+ DFDGD
Subjt: YLHLVEKG-------EIYVRRGGRLVRVRH-----VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDC
Query: LHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAH--LIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLP
++ +VPQS E R E++E+ + +Q+++ QS + ++ + D+L + ++ ++ N L + +LPP ++ P + +WTGKQ+ S+++P
Subjt: LHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAH--LIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLP
Query: ------ADFDYSSPSH----CVYIKNGELI----------SSEG----SYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYL
D D S S+ + I+NGE+I +S+G + W ++ G E C+G Q V+ WL G S+ + D
Subjt: ------ADFDYSSPSH----CVYIKNGELI----------SSEG----SYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYL
Query: SVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKD-NSLLA
D+ M ++ ++EA + + + D+ + L E + +E + S LNQA RD ++S KD N++
Subjt: SVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKD-NSLLA
Query: MCKAGSKGNLLKLVQHGMCLG---LQHSLVPLSF---GLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSF
M AGSKG+ + + Q C+G ++ +P F LPH KD ++ FI ENS+L GL P E F H++ R+
Subjt: MCKAGSKGNLLKLVQHGMCLG---LQHSLVPLSF---GLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSF
Query: SDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELY
+ G + RRL M D+ YDG+VRNA G+ ++QF+Y D T V +++
Subjt: SDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELY
|
|
| Q5D869 DNA-directed RNA polymerase V subunit 1 | 1.2e-68 | 26.83 | Show/hide |
Query: MEDERDGELHIPSGLLTGVTFSVSTQED--TENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVC
ME+E E I G + G+TF++++ + ++IS ++ ++++ LGLP +C +CG+ CEGHFG I+ P I HP ++E+ Q+L+ +C
Subjt: MEDERDGELHIPSGLLTGVTFSVSTQED--TENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVC
Query: PGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKY--QKRVARGGLPPDYWSFIPK-DEQQEESYCR
C I+ + KG G L + +L S + ++ + + Y K +R L P W+F+ + + Y R
Subjt: PGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKY--QKRVARGGLPPDYWSFIPK-DEQQEESYCR
Query: PNRKILTHAQVRYLLKDIDPKFLKKFVS----VTDSLFLNCFPVTPNCHRVTEMTHSFS----NGQRLVFDERTRAYKKLVDFRGT-------------A
P L +V+ +L+ I + KK + + L PV PNC V E + FS + R+ E KK++ + + A
Subjt: PNRKILTHAQVRYLLKDIDPKFLKKFVS----VTDSLFLNCFPVTPNCHRVTEMTHSFS----NGQRLVFDERTRAYKKLVDFRGT-------------A
Query: NELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWN----MK
+E+ RV+D + + + ++ D+ Y KI D+++S ++ + + K S R V+ GD ++E+GIP +A+R+ E +S N K
Subjt: NELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWN----MK
Query: KLSTSCYLHLVEKGEIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVP
+ L + Y R G + EL G ++R + D DVV INRPP+ H+HSL AL V V ++V +NPL CSP DFDGDC+H + P
Subjt: KLSTSCYLHLVEKGEIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVP
Query: QSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSP
QSL A+ E+ EL S+++QL++ +G+ +L + DSL + +++E V L+ QQL M L PPA+ K+ + WT Q+ + P
Subjt: QSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSP
Query: SHCV----YIKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLK
V +K + + GS + + ++F +E + L Q +L E L G S+SL DL S S +M D+ L E + +
Subjt: SHCV----YIKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLK
Query: QLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPL
+L + S++D L + ++ + + K S+ + S + KLVQ LGLQ S
Subjt: QLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPL
Query: SFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAY
K RK G R S + +V+ F GL+P+E AHS+ R+ S PGTL + L ++RDI DG+VRN
Subjt: SFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAY
Query: GNQLVQFSYDIDRGSPTSVSNELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLN
N ++QF Y +D E + G+PVG LAA A+S AY A +L++SP N
Subjt: GNQLVQFSYDIDRGSPTSVSNELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLN
|
|
| Q9LQ02 DNA-directed RNA polymerase IV subunit 1 | 4.3e-287 | 55.32 | Show/hide |
Query: MEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPG
MED+ + EL +P G LT + FS+S D + +SV+ V+A +V+D +LGLPNP C TCGS K CEGHFGVI F ++II+PYFL EVA +LNK+CPG
Subjt: MEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPG
Query: CKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKI
CK IR++ + ED +P+ CRYC +L YP M+F++++ ++FR+S ++VEV E K +KR LPPDYWSF+P+D +ES +P R+I
Subjt: CKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKI
Query: LTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD
+THAQV LL ID + +KK + + +SL L FPVTPN +RVTE+ H F NG RL+FDERTR YKKLV F G EL SRV++C++ S+L E + SKD
Subjt: LTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD
Query: LVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRH
+K DT CGLR++KDV+LGKRSDH FR VVVGDP+++L+EIGIP +A+RLQ+SEHL+ N ++L TS L++ E++VRRG RLV ++
Subjt: LVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRH
Query: VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLL
V +L GD I+R L D D VL+NRPPSIHQHSLIA++V++LP +SV+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VEL ELV+LD+QLIN Q+GRNLL
Subjt: VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLL
Query: SLSHDSLTAAHLI-MEDGVSLNVFEMQQLQMLALHQLLPPAIVKA-PTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELIS-SEGSYWLRDTGRN
SL DSLTAA+L+ +E LN +MQQLQM QL PPAI+KA P+ WTG QLF +L P FDY+ P + V + NGEL+S SEGS WLRD N
Subjt: SLSHDSLTAAHLI-MEDGVSLNVFEMQQLQMLALHQLLPPAIVKA-PTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELIS-SEGSYWLRDTGRN
Query: LFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSA-GDDEGNQNVLSIAVES
+ L++H +GK LDI+ AQ +L +WL MRGLSVSL+DLYLS D S KN+ ++I GL+EAE+ CN +QLMV+S +D L+ G+D+ +V +A
Subjt: LFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSA-GDDEGNQNVLSIAVES
Query: LCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPD
CYE+QKSA L++ +V AFK +RD+Q L Y+Y + NS L M KAGSKGN+ KLVQH MC+GLQ+S V LSFG P +LTC+AWN P K
Subjt: LCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPD
Query: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNAN
T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA++PGTL+RRL F MRDIY AYDG+VRN++GNQLVQF+Y E D
Subjt: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNAN
Query: NVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
I G+ +GSL+ACA+SEAAYSALDQPISLLE SPLLNLK
Subjt: NVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G63020.1 nuclear RNA polymerase D1A | 3.0e-288 | 55.32 | Show/hide |
Query: MEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPG
MED+ + EL +P G LT + FS+S D + +SV+ V+A +V+D +LGLPNP C TCGS K CEGHFGVI F ++II+PYFL EVA +LNK+CPG
Subjt: MEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPG
Query: CKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKI
CK IR++ + ED +P+ CRYC +L YP M+F++++ ++FR+S ++VEV E K +KR LPPDYWSF+P+D +ES +P R+I
Subjt: CKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKI
Query: LTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD
+THAQV LL ID + +KK + + +SL L FPVTPN +RVTE+ H F NG RL+FDERTR YKKLV F G EL SRV++C++ S+L E + SKD
Subjt: LTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD
Query: LVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRH
+K DT CGLR++KDV+LGKRSDH FR VVVGDP+++L+EIGIP +A+RLQ+SEHL+ N ++L TS L++ E++VRRG RLV ++
Subjt: LVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRH
Query: VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLL
V +L GD I+R L D D VL+NRPPSIHQHSLIA++V++LP +SV+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VEL ELV+LD+QLIN Q+GRNLL
Subjt: VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLL
Query: SLSHDSLTAAHLI-MEDGVSLNVFEMQQLQMLALHQLLPPAIVKA-PTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELIS-SEGSYWLRDTGRN
SL DSLTAA+L+ +E LN +MQQLQM QL PPAI+KA P+ WTG QLF +L P FDY+ P + V + NGEL+S SEGS WLRD N
Subjt: SLSHDSLTAAHLI-MEDGVSLNVFEMQQLQMLALHQLLPPAIVKA-PTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELIS-SEGSYWLRDTGRN
Query: LFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSA-GDDEGNQNVLSIAVES
+ L++H +GK LDI+ AQ +L +WL MRGLSVSL+DLYLS D S KN+ ++I GL+EAE+ CN +QLMV+S +D L+ G+D+ +V +A
Subjt: LFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSA-GDDEGNQNVLSIAVES
Query: LCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPD
CYE+QKSA L++ +V AFK +RD+Q L Y+Y + NS L M KAGSKGN+ KLVQH MC+GLQ+S V LSFG P +LTC+AWN P K
Subjt: LCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPD
Query: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNAN
T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA++PGTL+RRL F MRDIY AYDG+VRN++GNQLVQF+Y E D
Subjt: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNAN
Query: NVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
I G+ +GSL+ACA+SEAAYSALDQPISLLE SPLLNLK
Subjt: NVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| AT1G63020.2 nuclear RNA polymerase D1A | 3.0e-288 | 55.32 | Show/hide |
Query: MEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPG
MED+ + EL +P G LT + FS+S D + +SV+ V+A +V+D +LGLPNP C TCGS K CEGHFGVI F ++II+PYFL EVA +LNK+CPG
Subjt: MEDERDGELHIPSGLLTGVTFSVSTQEDTENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPG
Query: CKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKI
CK IR++ + ED +P+ CRYC +L YP M+F++++ ++FR+S ++VEV E K +KR LPPDYWSF+P+D +ES +P R+I
Subjt: CKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKI
Query: LTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD
+THAQV LL ID + +KK + + +SL L FPVTPN +RVTE+ H F NG RL+FDERTR YKKLV F G EL SRV++C++ S+L E + SKD
Subjt: LTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKL-QSKD
Query: LVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRH
+K DT CGLR++KDV+LGKRSDH FR VVVGDP+++L+EIGIP +A+RLQ+SEHL+ N ++L TS L++ E++VRRG RLV ++
Subjt: LVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEKGEIYVRRGGRLVRVRH
Query: VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLL
V +L GD I+R L D D VL+NRPPSIHQHSLIA++V++LP +SV+SLNP+CC PFRGDFDGDCLHGYVPQS++A+VEL ELV+LD+QLIN Q+GRNLL
Subjt: VLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLL
Query: SLSHDSLTAAHLI-MEDGVSLNVFEMQQLQMLALHQLLPPAIVKA-PTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELIS-SEGSYWLRDTGRN
SL DSLTAA+L+ +E LN +MQQLQM QL PPAI+KA P+ WTG QLF +L P FDY+ P + V + NGEL+S SEGS WLRD N
Subjt: SLSHDSLTAAHLI-MEDGVSLNVFEMQQLQMLALHQLLPPAIVKA-PTLRSCVWTGKQLFSILLPADFDYSSPSHCVYIKNGELIS-SEGSYWLRDTGRN
Query: LFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSA-GDDEGNQNVLSIAVES
+ L++H +GK LDI+ AQ +L +WL MRGLSVSL+DLYLS D S KN+ ++I GL+EAE+ CN +QLMV+S +D L+ G+D+ +V +A
Subjt: LFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSA-GDDEGNQNVLSIAVES
Query: LCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPD
CYE+QKSA L++ +V AFK +RD+Q L Y+Y + NS L M KAGSKGN+ KLVQH MC+GLQ+S V LSFG P +LTC+AWN P K
Subjt: LCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLSFGLPHKLTCSAWNSQKKPCYIRKDGLPD
Query: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNAN
T+S++PY V+ENSFL+GLNP E F HSVT+RDSSFS NA++PGTL+RRL F MRDIY AYDG+VRN++GNQLVQF+Y E D
Subjt: RTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDIDRGSPTSVSNELYGENDNAN
Query: NVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
I G+ +GSL+ACA+SEAAYSALDQPISLLE SPLLNLK
Subjt: NVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLNLK
|
|
| AT2G40030.1 nuclear RNA polymerase D1B | 8.8e-70 | 26.83 | Show/hide |
Query: MEDERDGELHIPSGLLTGVTFSVSTQED--TENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVC
ME+E E I G + G+TF++++ + ++IS ++ ++++ LGLP +C +CG+ CEGHFG I+ P I HP ++E+ Q+L+ +C
Subjt: MEDERDGELHIPSGLLTGVTFSVSTQED--TENISVITVDAAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVC
Query: PGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKY--QKRVARGGLPPDYWSFIPK-DEQQEESYCR
C I+ + KG G L + +L S + ++ + + Y K +R L P W+F+ + + Y R
Subjt: PGCKTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKY--QKRVARGGLPPDYWSFIPK-DEQQEESYCR
Query: PNRKILTHAQVRYLLKDIDPKFLKKFVS----VTDSLFLNCFPVTPNCHRVTEMTHSFS----NGQRLVFDERTRAYKKLVDFRGT-------------A
P L +V+ +L+ I + KK + + L PV PNC V E + FS + R+ E KK++ + + A
Subjt: PNRKILTHAQVRYLLKDIDPKFLKKFVS----VTDSLFLNCFPVTPNCHRVTEMTHSFS----NGQRLVFDERTRAYKKLVDFRGT-------------A
Query: NELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWN----MK
+E+ RV+D + + + ++ D+ Y KI D+++S ++ + + K S R V+ GD ++E+GIP +A+R+ E +S N K
Subjt: NELGSRVLDCLKISKLSPEKLQSKDLVYQQKKIKDTATSSCGLRWIKDVVLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWN----MK
Query: KLSTSCYLHLVEKGEIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVP
+ L + Y R G + EL G ++R + D DVV INRPP+ H+HSL AL V V ++V +NPL CSP DFDGDC+H + P
Subjt: KLSTSCYLHLVEKGEIYVRRGGRLVRVRHVLELNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVP
Query: QSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSP
QSL A+ E+ EL S+++QL++ +G+ +L + DSL + +++E V L+ QQL M L PPA+ K+ + WT Q+ + P
Subjt: QSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLIMEDGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILLPADFDYSSP
Query: SHCV----YIKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLK
V +K + + GS + + ++F +E + L Q +L E L G S+SL DL S S +M D+ L E + +
Subjt: SHCV----YIKNGELISSEGSYWLRDTGRNLFQALIEHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLK
Query: QLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPL
+L + S++D L + ++ + + K S+ + S + KLVQ LGLQ S
Subjt: QLMVDSHKDILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPL
Query: SFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAY
K RK G R S + +V+ F GL+P+E AHS+ R+ S PGTL + L ++RDI DG+VRN
Subjt: SFGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRD--SSFSDNAEVPGTLTRRLTFLMRDIYNAYDGSVRNAY
Query: GNQLVQFSYDIDRGSPTSVSNELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLN
N ++QF Y +D E + G+PVG LAA A+S AY A +L++SP N
Subjt: GNQLVQFSYDIDRGSPTSVSNELYGENDNANNVIGGQPVGSLAACAISEAAYSALDQPISLLEASPLLN
|
|
| AT4G35800.1 RNA polymerase II large subunit | 3.0e-46 | 23.63 | Show/hide |
Query: VTFSVSTQEDTENISVITVD----------AAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGCKTI----
V F + + ++ +SVI V+ G +SD +LG + +C TC +N+ + C GHFG ++ + H F+ V ++ VC C I
Subjt: VTFSVSTQEDTENISVITVD----------AAGEVSDPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGCKTI----
Query: -----RQELWGKVEDPTSNYHR----PKGCRYCFG-------SLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQ
+Q + K+++P + + K C G P++ + + + +K K Q+ + PD P + +
Subjt: -----RQELWGKVEDPTSNYHR----PKGCRYCFG-------SLKEWYPPMRFKLSSTDMFRKSMLMVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQ
Query: QEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKIS
Q R + + L +PKF + D + L P+ P R + M + S + D+ T ++ IS
Subjt: QEESYCRPNRKILTHAQVRYLLKDIDPKFLKKFVSVTDSLFLNCFPVTPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKIS
Query: KLSPEKLQSKDLVYQQKKI--KDTATSSCGLRWIKDV--------------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKL
+ + + LQ Y ++ + AT G R IK + ++GKR D R V+ DP I + E+G+P +A L E ++ +N+++L
Subjt: KLSPEKLQSKDLVYQQKKI--KDTATSSCGLRWIKDV--------------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKL
Query: STSCYLHLVEKG----------EIYVRRGGRLVRVRHVLE-----LNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFR
LV+ G + +R G+ + +R++ + L +G + R L D D VL NR PS+H+ S++ ++++P S+ LN SP+
Subjt: STSCYLHLVEKG----------EIYVRRGGRLVRVRHVLE-----LNMGDTIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFR
Query: GDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI--MEDGVSLNVFEMQQLQMLALHQLLP-PAIVKAPTLRSCVWTGK
DFDGD ++ +VPQS E R E+ EL+ + + +++ Q+ R ++ + D+L I + + +VF + +P PAI+K L WTGK
Subjt: GDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLTAAHLI--MEDGVSLNVFEMQQLQMLALHQLLP-PAIVKAPTLRSCVWTGK
Query: QLFSILLPADFD--------------YSSPSHC-VYIKNGELISSEGSYWLRDTGRNLFQALI--EHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLY
Q+F++++P + + +P V I+ GEL++ T +I E A L Q ++ WL G ++ +
Subjt: QLFSILLPADFD--------------YSSPSHC-VYIKNGELISSEGSYWLRDTGRNLFQALI--EHCEGKALDILRDAQGVLCEWLSMRGLSVSLSDLY
Query: LSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAG-DDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLL
D+ + + M+ I E N K + D + D E + + +E + + LN+A DA + + ++ N+L
Subjt: LSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKDILSAG-DDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSKDNSLL
Query: AMCKAGSKGNLLKLVQHGMCLGLQH---SLVPLSFG---LPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSS
AM AGSKG+ + + Q C+G Q+ +P F LPH KD ++ F VENS+L GL P E F H++ R+
Subjt: AMCKAGSKGNLLKLVQHGMCLGLQH---SLVPLSFG---LPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVTNRDSS
Query: FSDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDID
+ G + RRL M DI YDG+VRN+ G+ ++QF Y D
Subjt: FSDNAEV--PGTLTRRLTFLMRDIYNAYDGSVRNAYGNQLVQFSYDID
|
|
| AT5G60040.1 nuclear RNA polymerase C1 | 6.2e-39 | 23.29 | Show/hide |
Query: DPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGC------KTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPP
DP++G PN C+TC N + C GH+G +K + + + + + +L +C C + + ++ K+ +P +
Subjt: DPKLGLPNPSYQCSTCGSNVLKCCEGHFGVIKFPFTIIHPYFLSEVAQVLNKVCPGC------KTIRQELWGKVEDPTSNYHRPKGCRYCFGSLKEWYPP
Query: MRFKLSSTDMFRKSML-MVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKILTHAQVRYLLKDIDPK--FLKKFVSVTDSLFLNCFPV
R + M+ + + + + + GG + S I +Q + P +L V L K + K L ++L + C V
Subjt: MRFKLSSTDMFRKSML-MVEVKENMSKKYQKRVARGGLPPDYWSFIPKDEQQEESYCRPNRKILTHAQVRYLLKDIDPK--FLKKFVSVTDSLFLNCFPV
Query: TPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQSKDLV------YQQKKIKDTATS------SCGLRWIKDV
P R + M + + ++ T K+++ + +++ S+ SP+ +Q D V Y +++ S L+ +K
Subjt: TPNCHRVTEMTHSFSNGQRLVFDERTRAYKKLVDFRGTANELGSRVLDCLKISKLSPEKLQSKDLV------YQQKKIKDTATS------SCGLRWIKDV
Query: -------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEK--GEIYVR----RGGRLV---RVRHVLELNMGD
+ GKR + R V+ DPN++++E+GIP +A+ L E +S N++KL C + K G VR LV R R EL +G
Subjt: -------VLGKRSDHCFRMVVVGDPNIELSEIGIPCHVAERLQISEHLSAWNMKKLSTSCYLHLVEK--GEIYVR----RGGRLV---RVRHVLELNMGD
Query: TIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLT
+ R L + DVVL NR PS+H+ S++ +++P + L N C+P+ DFDGD ++ +VPQ+ EAR E L+ + L ++G L++ + D LT
Subjt: TIYRPLADRDVVLINRPPSIHQHSLIALSVKVLPVSSVLSLNPLCCSPFRGDFDGDCLHGYVPQSLEARVELRELVSLDRQLINGQSGRNLLSLSHDSLT
Query: AAHLIME-----DGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILL-------------PADFDYSSPSH-----------CVYIKN
++ LI D + ++ + L P I+K L WTGKQ+FS+LL + ++ H VY +N
Subjt: AAHLIME-----DGVSLNVFEMQQLQMLALHQLLPPAIVKAPTLRSCVWTGKQLFSILL-------------PADFDYSSPSH-----------CVYIKN
Query: GELISSE-GSYWLRDTGRN-LFQALIEHCEGKALDILRDAQGVL-CEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKD
ELIS + G L + ++ L+ L+ A + + L W+ + G S+ + D +Q EE + KD
Subjt: GELISSE-GSYWLRDTGRN-LFQALIEHCEGKALDILRDAQGVL-CEWLSMRGLSVSLSDLYLSVDSYSHKNMMDDIFCGLQEAEETCNLKQLMVDSHKD
Query: ILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSK--------DNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLS
+ G D+ ++ + +L Q A L+ A + + I N + + + K NS L M + GSKG+ + + Q C+G Q
Subjt: ILSAGDDEGNQNVLSIAVESLCYEKQKSAPLNQASVDAFKKVFRDIQNLVYKYSSK--------DNSLLAMCKAGSKGNLLKLVQHGMCLGLQHSLVPLS
Query: FGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIP--------YAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGT--LTRRLTFLMRDIYNAYD
N + P DG DR+ P V NSF SGL E F H++ R+ + T ++RRL + D+ YD
Subjt: FGLPHKLTCSAWNSQKKPCYIRKDGLPDRTQSFIP--------YAVVENSFLSGLNPFECFAHSVTNRDSSFSDNAEVPGT--LTRRLTFLMRDIYNAYD
Query: GSVRNAYGNQLVQFSYDIDRGSP
+VRNA G ++QF+Y D P
Subjt: GSVRNAYGNQLVQFSYDIDRGSP
|
|
