CuGenDBv2

Gene ID	Sgr022157
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	PHD finger protein
Genome location	tig00153894:828140..830319
RNA-Seq Expression	Sgr022157
Synteny	Sgr022157
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6595711.1 PHD finger protein, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-55

67.24

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI
        MVV+ RPLKRMKRRVTADL+DFLSFPSSSMS +        DHLFTGPFRTNV TFL+NHAL PPPSSLFPHLLTWQILFRVG+LVDGPDSQPAVVYLDI
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI

Query:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VEEDVARSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

KAG7027672.1 PHD finger protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.3e-55

67.24

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI
        MVV+ RPLKRMKRRVTADL+DFLSFPSSSMS +        DHLFTGPFRTNV TFL+NHAL PPPSSLFPHLLTWQILFRVG+LVDGPDSQPAVVYLDI
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI

Query:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VEEDVARSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

XP_022925287.1 PHD finger protein At1g33420-like [Cucurbita moschata]

1.3e-55

67.24

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI
        MVV+ RPLKRMKRRVTADL+DFLSFPSSSMS +        DHLFTGPFRTNV TFL+NHAL PPPSSLFPHLLTWQILFRVG+LVDGPDSQPAVVYLDI
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI

Query:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VEEDVARSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

XP_022966209.1 PHD finger protein At1g33420 [Cucurbita maxima]

1.3e-55

67.24

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI
        MVV+ RPLKRMKRRVTADL+DFLSFPSSSMS +        DHLFTGPFRTNV TFL+NHAL PPPSSLFPHLLTWQILFRVG+LVDGPDSQPAVVYLDI
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI

Query:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VEEDVARSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

XP_038881975.1 PHD finger protein At1g33420 [Benincasa hispida]

1.7e-55

66.11

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPA
        MVV+ RPLKRMKRRVTADLYDFLSFPSSSMS A              DHLFT PFRTNVRTFLS HALLPPPSSLFPHLLTWQILFRVG+LVDGPDSQPA
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPA

Query:  VVYLDIVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VVYLDIVEEDV RSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VVYLDIVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L117 PHD domain-containing protein

1.7e-53

64.41

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSA-----------ADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVY
        MVV+ RPLKRMKRRVTADL+DFLSFPSSS S+           +DHLFT PFR+NVRTFLS HALLPPPSSLFPHLLTWQILFRVG+LV GPDSQPAVVY
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSA-----------ADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVY

Query:  LDIVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        LDIVEEDV RSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  LDIVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

A0A1S3BNE7 PHD finger protein At1g33420

2.3e-53

64.57

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSA---------ADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLD
        MVV+ RPLKRMKRRVTADL+DFLSFPSSS S+         +DH+FT PFR+NVRTFLS HALLPPPSSLFPHLLTWQILFRVG+LV GPDSQPAVVYLD
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSA---------ADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLD

Query:  IVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        IVEEDV RSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  IVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

A0A5D3DVQ3 PHD finger protein

2.3e-53

64.57

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSA---------ADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLD
        MVV+ RPLKRMKRRVTADL+DFLSFPSSS S+         +DH+FT PFR+NVRTFLS HALLPPPSSLFPHLLTWQILFRVG+LV GPDSQPAVVYLD
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSA---------ADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLD

Query:  IVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        IVEEDV RSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  IVEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

A0A6J1EBC4 PHD finger protein At1g33420-like

6.4e-56

67.24

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI
        MVV+ RPLKRMKRRVTADL+DFLSFPSSSMS +        DHLFTGPFRTNV TFL+NHAL PPPSSLFPHLLTWQILFRVG+LVDGPDSQPAVVYLDI
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI

Query:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VEEDVARSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

A0A6J1HT23 PHD finger protein At1g33420

6.4e-56

67.24

Show/hide

Query:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI
        MVV+ RPLKRMKRRVTADL+DFLSFPSSSMS +        DHLFTGPFRTNV TFL+NHAL PPPSSLFPHLLTWQILFRVG+LVDGPDSQPAVVYLDI
Subjt:  MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAA--------DHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDI

Query:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        VEEDVARSRS+YCDQCRVVG                                   WSAHPVC KRYHFII+  G
Subjt:  VEEDVARSRSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

SwissProt top hits

e value

%identity

Alignment

Q9C810 PHD finger protein At1g33420

1.3e-26

42.77

Show/hide

Query:  GRPLKRMKR--RVTADLYDFLSFPSSSMSAADHLFTGPFRTNVRTFLSNHALLP-PPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDIVEEDVAR-S
        GR  KR +R  R++ADLYDF +FP++ ++  +     PFR  VRTFL+ HA +  PPS+LF  L+TWQI+ R G+  DG D    +V LD+VEEDV R S
Subjt:  GRPLKRMKR--RVTADLYDFLSFPSSSMSAADHLFTGPFRTNVRTFLSNHALLP-PPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDIVEEDVAR-S

Query:  RSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        RS+YC+ C VVG                                   WS+HPVC KRY FIIR  G
Subjt:  RSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

Arabidopsis top hits

e value

%identity

Alignment

AT1G33420.1 RING/FYVE/PHD zinc finger superfamily protein

9.5e-28

42.77

Show/hide

Query:  GRPLKRMKR--RVTADLYDFLSFPSSSMSAADHLFTGPFRTNVRTFLSNHALLP-PPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDIVEEDVAR-S
        GR  KR +R  R++ADLYDF +FP++ ++  +     PFR  VRTFL+ HA +  PPS+LF  L+TWQI+ R G+  DG D    +V LD+VEEDV R S
Subjt:  GRPLKRMKR--RVTADLYDFLSFPSSSMSAADHLFTGPFRTNVRTFLSNHALLP-PPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDIVEEDVAR-S

Query:  RSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG
        RS+YC+ C VVG                                   WS+HPVC KRY FIIR  G
Subjt:  RSIYCDQCRVVGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMG

Sequences

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CDS sequence

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ATGGTCGTTAGTGGCCGCCCCCTCAAGAGGATGAAGAGACGGGTCACTGCAGATCTCTACGACTTCCTCTCTTTCCCCTCCTCCTCCATGTCCGCCGCCGACCATCTCTT
CACCGGCCCCTTCCGAACCAACGTCCGCACCTTCCTCTCCAACCACGCCCTCCTCCCCCCTCCCTCCTCCCTCTTCCCTCACCTTCTCACATGGCAGATCCTCTTCCGCG
TCGGCGAGCTCGTCGACGGCCCCGATTCCCAGCCTGCCGTCGTCTATCTCGATATCGTCGAGGAGGATGTCGCCAGATCCAGATCCATCTACTGCGATCAGTGCCGAGTT
GTTGGTGAGTCCATCCATCCGTCGATTTCTCCTGCTCGCCGACCTTCTGGCGGCCGGCGAACTCTTGACTCGTTCTGGCTTTCCAAAATATCGCGATATGATTTACTTTG
TTGGAGTGCACACCCTGTGTGCGGGAAACGATACCATTTTATAATAAGGCTAATGGGAGTTCCATTGGAGGATACCACAAGCCATGCATGTGCTGTGGAGACGTCTTGCA
TCTCTCCGAGTCCAAGGTCAATGGAAGAGAGGGTGGTTCAAGGCACCTATCTGGAAGCCATATCATGGATTTTTGGGATCGATTTTGTAAATGCTTGGAGTCAG

mRNA sequence

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Protein sequence

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MVVSGRPLKRMKRRVTADLYDFLSFPSSSMSAADHLFTGPFRTNVRTFLSNHALLPPPSSLFPHLLTWQILFRVGELVDGPDSQPAVVYLDIVEEDVARSRSIYCDQCRV
VGESIHPSISPARRPSGGRRTLDSFWLSKISRYDLLCWSAHPVCGKRYHFIIRLMGVPLEDTTSHACAVETSCISPSPRSMEERVVQGTYLEAISWIFGIDFVNAWSQ

Sgr022157 (gene) of Monk fruit (Qingpiguo) v1 genome