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Sgr022159 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr022159
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionhomeobox-DDT domain protein RLT3
Genome locationtig00153902:241447..243207
RNA-Seq ExpressionSgr022159
SyntenySgr022159
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR044977 - Homeobox-DDT domain protein RLT1/2/3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025078.1 Homeobox-DDT domain protein RLT3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2087.3Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSSL ELLQVVADFVGAINEDWF NF EGSSV  RD LASFASLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

XP_022144420.1 homeobox-DDT domain protein RLT3 isoform X1 [Momordica charantia]3.5e-3089.87Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVEGSEKQLEATCR
        RTSSLAEL+QVVADFVGAINEDWFCNFAEGSSV IRD LASFA LPQT SALA WLVK DALIALCVEGSEKQL+ATCR
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVEGSEKQLEATCR

XP_022936993.1 homeobox-DDT domain protein RLT3 [Cucurbita moschata]2.5e-2087.3Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSSL ELLQVVADFVGAINEDWF NF EGSSV  RD LASFASLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

XP_023546109.1 homeobox-DDT domain protein RLT3 isoform X1 [Cucurbita pepo subsp. pepo]5.5e-2085.71Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSSL ELLQVVADFVGA+NEDWF NF EGSSV  RD LASFASLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

XP_023546135.1 homeobox-DDT domain protein RLT3 isoform X2 [Cucurbita pepo subsp. pepo]5.5e-2085.71Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSSL ELLQVVADFVGA+NEDWF NF EGSSV  RD LASFASLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

TrEMBL top hitse value%identityAlignment
A0A0A0K3U2 DDT domain-containing protein1.3e-1986.89Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDA
        RTSS+AEL+QVVADFVGAINEDWFCN  E SSV I D LASFASLPQTTSALAFWLVKLDA
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDA

A0A5D3E8H6 Homeobox-DDT domain protein RLT3 isoform X12.3e-1982.54Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSS+AEL+QVVADFVGAINEDWFCN  E  SV I D LASFASLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

A0A6J1CRK0 homeobox-DDT domain protein RLT3 isoform X11.7e-3089.87Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVEGSEKQLEATCR
        RTSSLAEL+QVVADFVGAINEDWFCNFAEGSSV IRD LASFA LPQT SALA WLVK DALIALCVEGSEKQL+ATCR
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVEGSEKQLEATCR

A0A6J1FET2 homeobox-DDT domain protein RLT31.2e-2087.3Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSSL ELLQVVADFVGAINEDWF NF EGSSV  RD LASFASLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

A0A6J1IQ39 homeobox-DDT domain protein RLT33.5e-2085.71Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI
        RTSSL ELLQVVADFVGAINEDWF NF EGSSV  RD LASF SLPQTTSALAFWLVKLDA +
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALI

SwissProt top hitse value%identityAlignment
F4JRF5 Homeobox-DDT domain protein RLT34.4e-1251.47Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVE
        R+SS++E+ QV+ DFVGAINE+W  + ++     + + +  F S+PQTTSA+A WLVKLD LIA  VE
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVE

Arabidopsis top hitse value%identityAlignment
AT4G12750.1 Homeodomain-like transcriptional regulator3.1e-1351.47Show/hide
Query:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVE
        R+SS++E+ QV+ DFVGAINE+W  + ++     + + +  F S+PQTTSA+A WLVKLD LIA  VE
Subjt:  RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCGTACTTCCTCTTTGGCAGAACTTTTGCAGGTTGTTGCTGATTTTGTTGGTGCCATCAATGAGGATTGGTTCTGTAATTTTGCAGAAGGTTCTTCAGTCGGTATTCGAG
ATGCTTTAGCATCTTTTGCATCCTTGCCCCAAACTACGTCTGCTCTTGCATTCTGGTTGGTTAAATTGGATGCCTTAATTGCTTTATGTGTTGAAGGATCTGAAAAGCAG
CTAGAAGCCACTTGCAGAGTCGAGAGCATTGCATTTCATTGTCCACGTTGCTGCTCAATCTTGCCAGTAAAAAAGTACAGACCAGAGATAGATAATCCGAACACCCTCAC
CAACCCAACCCCTATTGAAGAATTTGTACAGGTTACCTGCAAAACCATAAGTGAGCACTGGCTATCGCTTTCGGTGTAG
mRNA sequenceShow/hide mRNA sequence
GCGTACTTCCTCTTTGGCAGAACTTTTGCAGGTTGTTGCTGATTTTGTTGGTGCCATCAATGAGGATTGGTTCTGTAATTTTGCAGAAGGTTCTTCAGTCGGTATTCGAG
ATGCTTTAGCATCTTTTGCATCCTTGCCCCAAACTACGTCTGCTCTTGCATTCTGGTTGGTTAAATTGGATGCCTTAATTGCTTTATGTGTTGAAGGATCTGAAAAGCAG
CTAGAAGCCACTTGCAGAGTCGAGAGCATTGCATTTCATTGTCCACGTTGCTGCTCAATCTTGCCAGTAAAAAAGTACAGACCAGAGATAGATAATCCGAACACCCTCAC
CAACCCAACCCCTATTGAAGAATTTGTACAGGTTACCTGCAAAACCATAAGTGAGCACTGGCTATCGCTTTCGGTGTAG
Protein sequenceShow/hide protein sequence
RTSSLAELLQVVADFVGAINEDWFCNFAEGSSVGIRDALASFASLPQTTSALAFWLVKLDALIALCVEGSEKQLEATCRVESIAFHCPRCCSILPVKKYRPEIDNPNTLT
NPTPIEEFVQVTCKTISEHWLSLSV