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Sgr022246 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr022246
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionDNA polymerase delta subunit 4
Genome locationtig00154044:370976..374201
RNA-Seq ExpressionSgr022246
SyntenySgr022246
Gene Ontology termsGO:0000731 - DNA synthesis involved in DNA repair (biological process)
GO:0006261 - DNA-dependent DNA replication (biological process)
GO:0043625 - delta DNA polymerase complex (cellular component)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR007218 - DNA polymerase delta, subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143634.1 uncharacterized protein LOC101209940 [Cucumis sativus]1.4e-4782.93Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        S RGGLKDFYKQRK SGISKA K SKPSS+KTKSPAN+A+  SD VQP AL+SHGS DLQDDYG SEN L+QFDMN AYGPCLGMTRM RWERA +LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPKDI TLLKAGKVQLECLWDSR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

XP_008467236.1 PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo]3.3e-4984.55Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        S RGGLKDFYKQRK SGISKA K SKPSS+KTKSPAN+A+  S+ VQP AL+SHGS DLQDDYGESENML+QFDMNMAYGPCLGMTRM RWERA +LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPKDI TLLKAGKVQLECLWDSR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

XP_022957680.1 uncharacterized protein LOC111459143 [Cucurbita moschata]9.1e-4780.49Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        SARGG+KDFYKQRK SG+SK    SKPSS+KTKS AN+AT  SDGVQP ALISHGS DL+DDYGESEN+L+QFDMNMAYGPCLGMTRM+RWE A  LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPK+IETLLK GKVQLECLW SR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

XP_023532644.1 uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo]4.5e-4679.67Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        SARGG+KDFYKQRK SG+SK    SKPSS+KTKS AN+AT  SDGVQP  LISHGS DL+DDYGESEN+L+QFDMNMAYGPCLGMTRM+RWE A  LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPK+IETLLK GKVQLECLW SR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

XP_038875328.1 DNA polymerase delta subunit 4 [Benincasa hispida]2.0e-4985.48Show/hide
Query:  SARGGLKDFYKQRKKSGISKAN-KGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGL
        SARGGLKDFYKQRK SGISKAN K SKPSS+K KSPAN+A+  SD VQP ALISHGS DLQDDYG  ENML+QFDMNMAYGPCLGMTRM RWERA NLGL
Subjt:  SARGGLKDFYKQRKKSGISKAN-KGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGL

Query:  NPPKDIETLLKAGKVQLECLWDSR
        NPPKDIETLLKA KVQLECLWDSR
Subjt:  NPPKDIETLLKAGKVQLECLWDSR

TrEMBL top hitse value%identityAlignment
A0A0A0KND6 Uncharacterized protein6.8e-4882.93Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        S RGGLKDFYKQRK SGISKA K SKPSS+KTKSPAN+A+  SD VQP AL+SHGS DLQDDYG SEN L+QFDMN AYGPCLGMTRM RWERA +LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPKDI TLLKAGKVQLECLWDSR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

A0A1S3CT23 DNA polymerase delta subunit 41.6e-4984.55Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        S RGGLKDFYKQRK SGISKA K SKPSS+KTKSPAN+A+  S+ VQP AL+SHGS DLQDDYGESENML+QFDMNMAYGPCLGMTRM RWERA +LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPKDI TLLKAGKVQLECLWDSR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

A0A5A7UNL0 DNA polymerase delta subunit 41.6e-4984.55Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        S RGGLKDFYKQRK SGISKA K SKPSS+KTKSPAN+A+  S+ VQP AL+SHGS DLQDDYGESENML+QFDMNMAYGPCLGMTRM RWERA +LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPKDI TLLKAGKVQLECLWDSR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

A0A6J1H180 uncharacterized protein LOC1114591434.4e-4780.49Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        SARGG+KDFYKQRK SG+SK    SKPSS+KTKS AN+AT  SDGVQP ALISHGS DL+DDYGESEN+L+QFDMNMAYGPCLGMTRM+RWE A  LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPK+IETLLK GKVQLECLW SR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

A0A6J1K4T3 uncharacterized protein LOC1114911824.9e-4679.67Show/hide
Query:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN
        SARGG+KDFYKQRK SG+SK    SKPSS KTKS A++AT  SDGVQP ALISHGS DL+DDYGESEN+L+QFDMNMAYGPCLGMTRM+RWE A  LGLN
Subjt:  SARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLN

Query:  PPKDIETLLKAGKVQLECLWDSR
        PPK+IETLLK GKVQLECLW SR
Subjt:  PPKDIETLLKAGKVQLECLWDSR

SwissProt top hitse value%identityAlignment
O59835 DNA polymerase delta subunit 41.6e-0653.49Show/hide
Query:  ENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLL
        E +L  FD    YGP LGMTRM RW+RA N  LNPP+ +  +L
Subjt:  ENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLL

Q3T0X9 DNA polymerase delta subunit 42.3e-0836.25Show/hide
Query:  HGSPDLQDDYGESE----------NMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLLKA--GKVQLEC-LW
        H   +L  D GE             +L+QFD+   YGPC G+TR+ RW RA  +GL PP ++  +L++  G  + +C LW
Subjt:  HGSPDLQDDYGESE----------NMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLLKA--GKVQLEC-LW

Q9CWP8 DNA polymerase delta subunit 49.5e-0739.08Show/hide
Query:  SKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLLKA
        S P  KK + P       S G   P L    +  L  +  E E +L+QFD+   YGPC G+TR+ RW RA  +GL PP ++  +LKA
Subjt:  SKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLLKA

Q9HCU8 DNA polymerase delta subunit 42.5e-0736.36Show/hide
Query:  SKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLLKA--GKVQLEC-LW
        S P  K+ + PA      S G   P L     P  +D+      +L+QFD+   YGPC G+TR+ RW RA  +GL PP ++  +LK   G  + +C LW
Subjt:  SKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIETLLKA--GKVQLEC-LW

Arabidopsis top hitse value%identityAlignment
AT1G09815.1 polymerase delta 41.3e-3562.02Show/hide
Query:  MATSARGGLKDFYKQRKKS---GISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERA
        MAT+A+  LK FYKQ K +   GISK    SKPSS+K  +P +AA   SD  QP ALISHGS DL +DY + E ML+QFDMN+ YGPCLGMTR+DRWERA
Subjt:  MATSARGGLKDFYKQRKKS---GISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERA

Query:  HNLGLNPPKDIETLLKAGKVQLECLWDSR
          LG+NPP +IE LLK GKVQ +CLW  R
Subjt:  HNLGLNPPKDIETLLKAGKVQLECLWDSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACATCGGCGCGAGGAGGCCTGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAGGCCAACAAGGGTTCCAAGCCCTCTTCTAAAAAGACGAAATC
TCCGGCCAACGCTGCAACTTTCGCCTCCGATGGCGTCCAACCGCCGGCTCTCATCTCTCACGGCTCCCCCGACCTTCAAGATGATTATGGTGAGTCTGAGAACATGCTGA
AGCAATTTGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACTAGAATGGATCGGTGGGAGCGTGCTCATAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACG
CTCTTAAAGGCTGGAAAAGTGCAGTTGGAATGCTTGTGGGATAGCCGATTCAAAGCTCTGGCTCCCTCTTTGCCTCCACCTTCACCTTCGTCGTCCCCTCTAAGGTTCCA
ACGCGAGACATTCACGCAAGCCGTTCTCTTTCATACTTCACTGGAGAGACCTTCGTGCGTGTTGCTCCTTTCAGATCTTGCGGCAAGGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACATCGGCGCGAGGAGGCCTGAAAGATTTCTACAAGCAAAGGAAAAAGAGTGGAATCTCCAAGGCCAACAAGGGTTCCAAGCCCTCTTCTAAAAAGACGAAATC
TCCGGCCAACGCTGCAACTTTCGCCTCCGATGGCGTCCAACCGCCGGCTCTCATCTCTCACGGCTCCCCCGACCTTCAAGATGATTATGGTGAGTCTGAGAACATGCTGA
AGCAATTTGATATGAACATGGCCTATGGACCTTGCCTTGGAATGACTAGAATGGATCGGTGGGAGCGTGCTCATAATCTTGGTTTGAACCCTCCAAAAGACATTGAGACG
CTCTTAAAGGCTGGAAAAGTGCAGTTGGAATGCTTGTGGGATAGCCGATTCAAAGCTCTGGCTCCCTCTTTGCCTCCACCTTCACCTTCGTCGTCCCCTCTAAGGTTCCA
ACGCGAGACATTCACGCAAGCCGTTCTCTTTCATACTTCACTGGAGAGACCTTCGTGCGTGTTGCTCCTTTCAGATCTTGCGGCAAGGCCTTAG
Protein sequenceShow/hide protein sequence
MATSARGGLKDFYKQRKKSGISKANKGSKPSSKKTKSPANAATFASDGVQPPALISHGSPDLQDDYGESENMLKQFDMNMAYGPCLGMTRMDRWERAHNLGLNPPKDIET
LLKAGKVQLECLWDSRFKALAPSLPPPSPSSSPLRFQRETFTQAVLFHTSLERPSCVLLLSDLAARP