; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr022617 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr022617
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionnuclear pore complex protein NUP1
Genome locationtig00000289:1637851..1638963
RNA-Seq ExpressionSgr022617
SyntenySgr022617
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016358.1 Nuclear pore complex protein NUP1 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0852.7Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGNKVTT TNE                 QA+  TTFKFGDK   PIPA+ A+E GN  AGSPF+FAS LV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

XP_022133602.1 nuclear pore complex protein NUP1 [Momordica charantia]7.5e-2551.19Show/hide
Query:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI---GIGSETTQHLEFTK------------------
        SSSS+   WEQG+++GS QGALKRRSSVLD++M SVGPI   +++SNL+F KGLSL ISGSSTSI   GIGSET Q  + TK                  
Subjt:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI---GIGSETTQHLEFTK------------------

Query:  ---------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                   SEMASKILEQLDKLT  K+ SSE KL    VRNNSPMKLSP
Subjt:  ---------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

XP_022133602.1 nuclear pore complex protein NUP1 [Momordica charantia]3.4e-0951.35Show/hide
Query:  PHLCFGNKVTTPTNEQ-----------------ATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGN VTTPTN+Q                 A V TTFKFGDK   PI  NA +E GN+N+GSPF+F+SPLV
Subjt:  PHLCFGNKVTTPTNEQ-----------------ATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

XP_022133602.1 nuclear pore complex protein NUP1 [Momordica charantia]3.7e-2450.6Show/hide
Query:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK--------------------
        +SSS+   W QG++LGS+QGALKRR+SVLDD+M SVGPI   + +SN LFPKGLSL  S +S  + GIGSET+QHL+ TK                    
Subjt:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK--------------------

Query:  -------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                 SEMASKILEQLDKLT  K+ SSELKLLS  VRNNSP KLSP
Subjt:  -------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

XP_038884353.1 nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida]1.9e-0752.7Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   F NK+TT TNE                 QA+  TTFKFGDK   PIPANAA+E GN+N GSP  FASPLV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

XP_038884353.1 nuclear pore complex protein NUP1-like isoform X1 [Benincasa hispida]3.7e-2450.6Show/hide
Query:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK--------------------
        +SSS+   W QG++LGS+QGALKRR+SVLDD+M SVGPI   + +SN LFPKGLSL  S +S  + GIGSET+QHL+ TK                    
Subjt:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK--------------------

Query:  -------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                 SEMASKILEQLDKLT  K+ SSELKLLS  VRNNSP KLSP
Subjt:  -------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

XP_038884354.1 nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida]1.9e-0752.7Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   F NK+TT TNE                 QA+  TTFKFGDK   PIPANAA+E GN+N GSP  FASPLV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

XP_038884354.1 nuclear pore complex protein NUP1-like isoform X2 [Benincasa hispida]3.7e-2450.6Show/hide
Query:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK--------------------
        +SSS+   W QG++LGS+QGALKRR+SVLDD+M SVGPI   + +SN LFPKGLSL  S +S  + GIGSET+QHL+ TK                    
Subjt:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK--------------------

Query:  -------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                 SEMASKILEQLDKLT  K+ SSELKLLS  VRNNSP KLSP
Subjt:  -------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

XP_038884355.1 nuclear pore complex protein NUP1-like isoform X3 [Benincasa hispida]1.9e-0752.7Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   F NK+TT TNE                 QA+  TTFKFGDK   PIPANAA+E GN+N GSP  FASPLV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

XP_038884355.1 nuclear pore complex protein NUP1-like isoform X3 [Benincasa hispida]1.8e-2350.3Show/hide
Query:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------
        +SS+   WEQG++L S QGALKRRSSVLDD++ SVGPI   + +SNLLFPKGLSL  S +S  + GIGSET+QHL+ TK                     
Subjt:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------

Query:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                SEMA KILEQLDKLT  K+ SSELKL S  VRNNSPMKLSP
Subjt:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

TrEMBL top hitse value%identityAlignment
A0A6J1BX57 nuclear pore complex protein NUP13.6e-2551.19Show/hide
Query:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI---GIGSETTQHLEFTK------------------
        SSSS+   WEQG+++GS QGALKRRSSVLD++M SVGPI   +++SNL+F KGLSL ISGSSTSI   GIGSET Q  + TK                  
Subjt:  SSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI---GIGSETTQHLEFTK------------------

Query:  ---------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                   SEMASKILEQLDKLT  K+ SSE KL    VRNNSPMKLSP
Subjt:  ---------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

A0A6J1BX57 nuclear pore complex protein NUP11.6e-0951.35Show/hide
Query:  PHLCFGNKVTTPTNEQ-----------------ATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGN VTTPTN+Q                 A V TTFKFGDK   PI  NA +E GN+N+GSPF+F+SPLV
Subjt:  PHLCFGNKVTTPTNEQ-----------------ATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

A0A6J1BX57 nuclear pore complex protein NUP19.0e-2450.3Show/hide
Query:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------
        +SS+   WEQG++L S QGALKRRSSVLDD++ SVGPI   + +SNLLFPKGLSL  S +S  + GIGSET+QHL+ TK                     
Subjt:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------

Query:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                SEMA KILEQLDKLT  K+ SSELKL S  VRNNSPMKLSP
Subjt:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

A0A6J1FF52 nuclear pore complex protein NUP1-like isoform X16.2e-0952.7Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGNKVTT TNE                 QA+  TTFKFGDK   PIPA+ A+E GN  AGSPF+FAS LV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

A0A6J1FF52 nuclear pore complex protein NUP1-like isoform X19.0e-2450.3Show/hide
Query:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------
        +SS+   WEQG++L S QGALKRRSSVLDD++ SVGPI   + +SNLLFPKGLSL  S +S  + GIGSET+QHL+ TK                     
Subjt:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------

Query:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                SEMA KILEQLDKLT  K+ SSELKL S  VRNNSPMKLSP
Subjt:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

A0A6J1FKS9 nuclear pore complex protein NUP1-like isoform X26.2e-0952.7Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGNKVTT TNE                 QA+  TTFKFGDK   PIPA+ A+E GN  AGSPF+FAS LV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

A0A6J1FKS9 nuclear pore complex protein NUP1-like isoform X22.0e-2350.3Show/hide
Query:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------
        +SS+   WEQG++L S QGALKRRSSVLDD++ SVGPI   + +SNLLFPKGLSL  S +S  + GIGSET QHL+ TK                     
Subjt:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------

Query:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                SEMA KILEQLDKLT  K+ SSELKL S  VRNNSPMKLSP
Subjt:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

A0A6J1JQT4 nuclear pore complex protein NUP1-like isoform X11.8e-0851.35Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGNKVTT TNE                 QA+  TTFKFGDK   PIPA+  +E GN  AGSPF+FAS LV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

A0A6J1K059 nuclear pore complex protein NUP1-like isoform X21.8e-0851.35Show/hide
Query:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV
        P   FGNKVTT TNE                 QA+  TTFKFGDK   PIPA+  +E GN  AGSPF+FAS LV
Subjt:  PHLCFGNKVTTPTNE-----------------QATVLTTFKFGDKVALPIPANAASEYGNQNAGSPFEFASPLV

A0A6J1K059 nuclear pore complex protein NUP1-like isoform X22.0e-2350.3Show/hide
Query:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------
        +SS+   WEQG++L S QGALKRRSSVLDD++ SVGPI   + +SNLLFPKGLSL  S +S  + GIGSET QHL+ TK                     
Subjt:  SSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQHLEFTK---------------------

Query:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP
                                SEMA KILEQLDKLT  K+ SSELKL S  VRNNSPMKLSP
Subjt:  ------------------------SEMASKILEQLDKLTSSKDISSELKLLSGDVRNNSPMKLSP

SwissProt top hitse value%identityAlignment
Q9CAF4 Nuclear pore complex protein NUP12.7e-0936.84Show/hide
Query:  EWEQGKILGSKQG---ALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQH----------------LEFTKSEMASKIL
        +WE+    GS+QG    LKRRSSVLD+D+ SVGP+   +++SN L  + L+L +S S  S+   G E T H                +    SEMASKIL
Subjt:  EWEQGKILGSKQG---ALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQH----------------LEFTKSEMASKIL

Query:  EQLDKLTSSKDISSELKLLSGDVRNNSPMKLSPWHPLPRSQKLPPISSLSSP
        +QLDKL S+              R  SP KLSP   + R   L  + ++ +P
Subjt:  EQLDKLTSSKDISSELKLLSGDVRNNSPMKLSPWHPLPRSQKLPPISSLSSP

Arabidopsis top hitse value%identityAlignment
AT3G10650.1 BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1)1.9e-1036.84Show/hide
Query:  EWEQGKILGSKQG---ALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQH----------------LEFTKSEMASKIL
        +WE+    GS+QG    LKRRSSVLD+D+ SVGP+   +++SN L  + L+L +S S  S+   G E T H                +    SEMASKIL
Subjt:  EWEQGKILGSKQG---ALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSI-GIGSETTQH----------------LEFTKSEMASKIL

Query:  EQLDKLTSSKDISSELKLLSGDVRNNSPMKLSPWHPLPRSQKLPPISSLSSP
        +QLDKL S+              R  SP KLSP   + R   L  + ++ +P
Subjt:  EQLDKLTSSKDISSELKLLSGDVRNNSPMKLSPWHPLPRSQKLPPISSLSSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCATCATCAACTCTGTTAGAATGGGAGCAAGGGAAAATTTTGGGGTCTAAACAAGGGGCTTTAAAACGCAGGAGTTCAGTTTTAGATGATGACATGAGATCTGT
TGGTCCTATTTGCAGTTTTCAAAAACAATCCAATCTCCTTTTCCCTAAAGGTTTGAGTTTACAGATTTCAGGCAGTTCCACTTCTATTGGAATTGGTTCTGAGACTACTC
AGCATTTGGAGTTTACAAAGAGTGAGATGGCCTCAAAAATATTAGAGCAGCTTGATAAATTAACCTCTTCAAAGGACATATCTTCTGAACTAAAGTTGCTTAGTGGTGAT
GTGAGGAATAACTCACCCATGAAGTTGTCACCATGGCATCCGCTCCCTCGCTCCCAAAAACTTCCCCCTATATCCTCCCTCTCCTCGCCCCCCGATGCCAACCTAGATAA
AGAAATCGTTGTCATACCGAATATTTGGGTTTGGAGATTAGTTGCCGTCGCGGAAGGAATTGATGATTGCTTGGGCCCCCACCTTTGCTTTGGAAACAAGGTTACCACCC
CAACAAACGAACAAGCTACTGTTCTTACCACTTTTAAATTTGGAGATAAAGTTGCACTTCCTATTCCCGCAAATGCTGCTTCAGAATATGGAAATCAGAATGCAGGGTCT
CCGTTTGAGTTTGCATCACCTTTAGTTCTTGCAG
mRNA sequenceShow/hide mRNA sequence
ATGTCATCATCATCAACTCTGTTAGAATGGGAGCAAGGGAAAATTTTGGGGTCTAAACAAGGGGCTTTAAAACGCAGGAGTTCAGTTTTAGATGATGACATGAGATCTGT
TGGTCCTATTTGCAGTTTTCAAAAACAATCCAATCTCCTTTTCCCTAAAGGTTTGAGTTTACAGATTTCAGGCAGTTCCACTTCTATTGGAATTGGTTCTGAGACTACTC
AGCATTTGGAGTTTACAAAGAGTGAGATGGCCTCAAAAATATTAGAGCAGCTTGATAAATTAACCTCTTCAAAGGACATATCTTCTGAACTAAAGTTGCTTAGTGGTGAT
GTGAGGAATAACTCACCCATGAAGTTGTCACCATGGCATCCGCTCCCTCGCTCCCAAAAACTTCCCCCTATATCCTCCCTCTCCTCGCCCCCCGATGCCAACCTAGATAA
AGAAATCGTTGTCATACCGAATATTTGGGTTTGGAGATTAGTTGCCGTCGCGGAAGGAATTGATGATTGCTTGGGCCCCCACCTTTGCTTTGGAAACAAGGTTACCACCC
CAACAAACGAACAAGCTACTGTTCTTACCACTTTTAAATTTGGAGATAAAGTTGCACTTCCTATTCCCGCAAATGCTGCTTCAGAATATGGAAATCAGAATGCAGGGTCT
CCGTTTGAGTTTGCATCACCTTTAGTTCTTGCAG
Protein sequenceShow/hide protein sequence
MSSSSTLLEWEQGKILGSKQGALKRRSSVLDDDMRSVGPICSFQKQSNLLFPKGLSLQISGSSTSIGIGSETTQHLEFTKSEMASKILEQLDKLTSSKDISSELKLLSGD
VRNNSPMKLSPWHPLPRSQKLPPISSLSSPPDANLDKEIVVIPNIWVWRLVAVAEGIDDCLGPHLCFGNKVTTPTNEQATVLTTFKFGDKVALPIPANAASEYGNQNAGS
PFEFASPLVLAX