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Sgr023176 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr023176
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description50S ribosomal protein L20
Genome locationtig00000729:3501785..3504330
RNA-Seq ExpressionSgr023176
SyntenySgr023176
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER56026.1 50S ribosomal protein L20 [Striga asiatica]2.2e-0436.19Show/hide
Query:  GCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCAINCSGYSLPGRLSKNGVVQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVEREAL
        G AG      PA+ + VNR I + G SH     P +   +     + L GR+ +     G VPA+ P+        K+VVF  H AAVE N+ATV R AL
Subjt:  GCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCAINCSGYSLPGRLSKNGVVQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVEREAL

Query:  RKNST
         +  T
Subjt:  RKNST

KAG7020093.1 hypothetical protein SDJN02_16775, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-3742.04Show/hide
Query:  WYDGSSLVSLSSIVLSSMKGGLVGAGSCS---SFFVSICSTLDMVGRRDAISWVHRSPMCITLNISSFTLPSSS--------SSSISLFTAISLPSDRTP
        ++DG+SLVS SSIVLSSMKGGLVGAG+ +   + +V++  + +               +C  L+I  F LP  S        SS +SLF    LP     
Subjt:  WYDGSSLVSLSSIVLSSMKGGLVGAGSCS---SFFVSICSTLDMVGRRDAISWVHRSPMCITLNISSFTLPSSS--------SSSISLFTAISLPSDRTP

Query:  YINTYIEEEQ-----SQIIKSQRWSWELELLNCTFEAKKKKTCLINCAKSSLSKLVSLVERSCRLFKALASAFRKSRFEYLMKQPVFSARPS--DR----
         ++TY EEE      S  I +      +EL   T E             S  +    + E + R+    AS          ++ P F  R +  DR    
Subjt:  YINTYIEEEQ-----SQIIKSQRWSWELELLNCTFEAKKKKTCLINCAKSSLSKLVSLVERSCRLFKALASAFRKSRFEYLMKQPVFSARPS--DR----

Query:  ---GCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCAINCSGYSLPGRLSKNGV-VQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVE
           G AGAA QI PALSQQV+R I  S   H NSGIPS+VGC +NCS +SLPGRL K GV   G V AHSP+QR L F IKAVV SPHEAA++ENSAT+E
Subjt:  ---GCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCAINCSGYSLPGRLSKNGV-VQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVE

Query:  REALRKNSTCFRVT
        R+ALR++ST F +T
Subjt:  REALRKNSTCFRVT

TrEMBL top hitse value%identityAlignment
A0A5A7RFR7 50S ribosomal protein L201.1e-0436.19Show/hide
Query:  GCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCAINCSGYSLPGRLSKNGVVQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVEREAL
        G AG      PA+ + VNR I + G SH     P +   +     + L GR+ +     G VPA+ P+        K+VVF  H AAVE N+ATV R AL
Subjt:  GCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCAINCSGYSLPGRLSKNGVVQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVEREAL

Query:  RKNST
         +  T
Subjt:  RKNST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTGGTATGATGGCTCCTCGCTCGTGTCGTTGAGTTCCATTGTCCTCTCGTCCATGAAGGGTGGGTTGGTGGGGGCTGGAAGTTGCTCTTCTTTCTTCGTCAGCAT
CTGCAGTACCTTAGACATGGTGGGTCGCAGAGACGCAATCTCCTGGGTGCACAGAAGCCCTATGTGCATCACTCTCAATATCTCCTCTTTTACACTACCATCTTCCTCCT
CCTCAAGCATAAGCCTCTTCACAGCTATCTCTCTTCCATCCGACAGAACGCCCTACATCAACACATATATAGAAGAGGAACAATCACAGATAATAAAATCTCAGCGTTGG
AGTTGGGAGTTGGAGTTGCTTAATTGCACGTTTGAAGCAAAGAAAAAGAAGACTTGCCTTATAAACTGTGCCAAATCCTCCTTGTCCAAGCTTGTTAGCCTCGTTGAAAG
ATCCTGTCGCCTTTTCAAGGCTCTAGCTTCCGCATTTAGAAAGTCAAGGTTTGAGTATCTCATGAAGCAACCTGTGTTCAGTGCTCGCCCTTCAGATCGTGGATGTGCAG
GAGCTGCTATTCAAATTTCTCCAGCACTGAGCCAACAGGTAAACCGACGCATTTATAGTTCCGGGCAGAGCCACTTGAACTCTGGCATACCCTCCGTTGTTGGGTGCGCT
ATCAACTGCTCGGGCTACAGCCTGCCTGGCCGACTGTCCAAAAATGGAGTTGTTCAAGGAACTGTTCCCGCACACAGCCCCATCCAGAGGTCCCTCAAATTCTTCATAAA
AGCTGTAGTTTTCAGCCCTCATGAAGCAGCCGTCGAGGAAAATTCGGCCACCGTTGAAAGGGAAGCATTGAGGAAGAACAGTACGTGCTTCCGCGTAACACAACACACAA
TCCATCAGCGACAAATCTCCATAACATTGAGCGAGGCCATAGTTGGTGTCCAGCCCTTTGCCCACAACTGCAACTCCAAAACCACCAGTTCGCATTTGTTCACTAATTAC
CTGCATTGTGGCCACGAAATTCGGCACAAAAGCCGTAGTATTATGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTGGTATGATGGCTCCTCGCTCGTGTCGTTGAGTTCCATTGTCCTCTCGTCCATGAAGGGTGGGTTGGTGGGGGCTGGAAGTTGCTCTTCTTTCTTCGTCAGCAT
CTGCAGTACCTTAGACATGGTGGGTCGCAGAGACGCAATCTCCTGGGTGCACAGAAGCCCTATGTGCATCACTCTCAATATCTCCTCTTTTACACTACCATCTTCCTCCT
CCTCAAGCATAAGCCTCTTCACAGCTATCTCTCTTCCATCCGACAGAACGCCCTACATCAACACATATATAGAAGAGGAACAATCACAGATAATAAAATCTCAGCGTTGG
AGTTGGGAGTTGGAGTTGCTTAATTGCACGTTTGAAGCAAAGAAAAAGAAGACTTGCCTTATAAACTGTGCCAAATCCTCCTTGTCCAAGCTTGTTAGCCTCGTTGAAAG
ATCCTGTCGCCTTTTCAAGGCTCTAGCTTCCGCATTTAGAAAGTCAAGGTTTGAGTATCTCATGAAGCAACCTGTGTTCAGTGCTCGCCCTTCAGATCGTGGATGTGCAG
GAGCTGCTATTCAAATTTCTCCAGCACTGAGCCAACAGGTAAACCGACGCATTTATAGTTCCGGGCAGAGCCACTTGAACTCTGGCATACCCTCCGTTGTTGGGTGCGCT
ATCAACTGCTCGGGCTACAGCCTGCCTGGCCGACTGTCCAAAAATGGAGTTGTTCAAGGAACTGTTCCCGCACACAGCCCCATCCAGAGGTCCCTCAAATTCTTCATAAA
AGCTGTAGTTTTCAGCCCTCATGAAGCAGCCGTCGAGGAAAATTCGGCCACCGTTGAAAGGGAAGCATTGAGGAAGAACAGTACGTGCTTCCGCGTAACACAACACACAA
TCCATCAGCGACAAATCTCCATAACATTGAGCGAGGCCATAGTTGGTGTCCAGCCCTTTGCCCACAACTGCAACTCCAAAACCACCAGTTCGCATTTGTTCACTAATTAC
CTGCATTGTGGCCACGAAATTCGGCACAAAAGCCGTAGTATTATGCTCTAA
Protein sequenceShow/hide protein sequence
MFWYDGSSLVSLSSIVLSSMKGGLVGAGSCSSFFVSICSTLDMVGRRDAISWVHRSPMCITLNISSFTLPSSSSSSISLFTAISLPSDRTPYINTYIEEEQSQIIKSQRW
SWELELLNCTFEAKKKKTCLINCAKSSLSKLVSLVERSCRLFKALASAFRKSRFEYLMKQPVFSARPSDRGCAGAAIQISPALSQQVNRRIYSSGQSHLNSGIPSVVGCA
INCSGYSLPGRLSKNGVVQGTVPAHSPIQRSLKFFIKAVVFSPHEAAVEENSATVEREALRKNSTCFRVTQHTIHQRQISITLSEAIVGVQPFAHNCNSKTTSSHLFTNY
LHCGHEIRHKSRSIML