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Sgr023217 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr023217
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionphotosystem II 5 kDa protein, chloroplastic
Genome locationtig00000892:1099471..1099779
RNA-Seq ExpressionSgr023217
SyntenySgr023217
Gene Ontology termsNA
InterPro domainsIPR040296 - Photosystem II 5kDa protein, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143237.1 photosystem II 5 kDa protein, chloroplastic [Cucumis sativus]5.4e-2875.7Show/hide
Query:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MASMAMTASFLP TA K PS+ ARR +IVAKASTS+   S  N+EVKN+K    QGRRELVAAAVTVAAA+LAK AMADEP RG+ EAKQKYAP+CVTMP
Subjt:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICRK
        TA ICRK
Subjt:  TASICRK

XP_008449703.1 PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo]3.2e-2876.64Show/hide
Query:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MASMAMTASFLP TA K PSA  RR +IVAKASTS+ + S  NLEVKN+K    QGRRELVAAAVTVAAA+LAK AMADEP RG+ EAKQKYAP+CVTMP
Subjt:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICRK
        TA ICRK
Subjt:  TASICRK

XP_022148791.1 photosystem II 5 kDa protein, chloroplastic [Momordica charantia]2.4e-2873.58Show/hide
Query:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEV-KNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MAS A+ ASFLP+TAKHPSA  RR +IVAKAS ++ D SK NLE+ ++++    QGRRELVAAAVTVAAA+LAK AMADEPKRG+AEAKQKYAPVCVTMP
Subjt:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEV-KNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICR
        TA ICR
Subjt:  TASICR

XP_022944588.1 photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata]1.8e-2670.91Show/hide
Query:  MASMAMTASFLPVTAKHPS-AVARRGIIVAKASTSST---DGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCV
        MASM++TASFLP TA  PS A ARR + V KASTS+      S ANLE+KN+K    QGRRELVAAAVTVAAA+ AK AMADEP RG+AEAKQKYAP+CV
Subjt:  MASMAMTASFLPVTAKHPS-AVARRGIIVAKASTSST---DGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCV

Query:  TMPTASICRK
        TMPTA ICRK
Subjt:  TMPTASICRK

XP_038901593.1 photosystem II 5 kDa protein, chloroplastic [Benincasa hispida]3.8e-2976.64Show/hide
Query:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MASMAMTASFLP TA K PS  ARR ++VAKASTSS D S  NLE+KN+K    QGRRELVAAAVTVAAA+LAK AMADEP RG+ EAKQKYAP+CVTMP
Subjt:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICRK
        TA ICRK
Subjt:  TASICRK

TrEMBL top hitse value%identityAlignment
A0A0A0KIB2 Uncharacterized protein2.6e-2875.7Show/hide
Query:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MASMAMTASFLP TA K PS+ ARR +IVAKASTS+   S  N+EVKN+K    QGRRELVAAAVTVAAA+LAK AMADEP RG+ EAKQKYAP+CVTMP
Subjt:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICRK
        TA ICRK
Subjt:  TASICRK

A0A1S3BML8 photosystem II 5 kDa protein, chloroplastic1.5e-2876.64Show/hide
Query:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MASMAMTASFLP TA K PSA  RR +IVAKASTS+ + S  NLEVKN+K    QGRRELVAAAVTVAAA+LAK AMADEP RG+ EAKQKYAP+CVTMP
Subjt:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICRK
        TA ICRK
Subjt:  TASICRK

A0A5A7TID9 Photosystem II 5 kDa protein1.5e-2876.64Show/hide
Query:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MASMAMTASFLP TA K PSA  RR +IVAKASTS+ + S  NLEVKN+K    QGRRELVAAAVTVAAA+LAK AMADEP RG+ EAKQKYAP+CVTMP
Subjt:  MASMAMTASFLPVTA-KHPSAVARRGIIVAKASTSSTDGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICRK
        TA ICRK
Subjt:  TASICRK

A0A6J1D6G0 photosystem II 5 kDa protein, chloroplastic1.2e-2873.58Show/hide
Query:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEV-KNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP
        MAS A+ ASFLP+TAKHPSA  RR +IVAKAS ++ D SK NLE+ ++++    QGRRELVAAAVTVAAA+LAK AMADEPKRG+AEAKQKYAPVCVTMP
Subjt:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEV-KNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMP

Query:  TASICR
        TA ICR
Subjt:  TASICR

A0A6J1J874 photosystem II 5 kDa protein, chloroplastic8.5e-2770.91Show/hide
Query:  MASMAMTASFLPVTAKHPS-AVARRGIIVAKASTSST---DGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCV
        MASM++TASFLP TA  PS A ARR + V KASTS+      S ANLE+KN+K    QGRRELVAAAVTVAAA+ AK AMADEP RG+AEAKQKYAP+CV
Subjt:  MASMAMTASFLPVTAKHPS-AVARRGIIVAKASTSST---DGSKANLEVKNIK----QGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCV

Query:  TMPTASICRK
        TMPTA ICRK
Subjt:  TMPTASICRK

SwissProt top hitse value%identityAlignment
B3EWI4 Photosystem II 5 kDa protein, chloroplastic8.8e-1350Show/hide
Query:  MASMAMTASFL----PVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQGRRELVAAAVTVAAASLAKVAMAD-EPKRGTAEAKQKYAPVCVTMP
        MAS+ M +SFL       AK PSA  RRG+++ KA     +    +   ++   GRREL  A    AA S+AK AMAD EPKRGT EAK+KY+ VCVT P
Subjt:  MASMAMTASFL----PVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQGRRELVAAAVTVAAASLAKVAMAD-EPKRGTAEAKQKYAPVCVTMP

Query:  TASICR
        TA ICR
Subjt:  TASICR

P31336 Photosystem II 5 kDa protein, chloroplastic3.7e-1148.57Show/hide
Query:  MASMAMTASFLPVT--AKHPSAVARRGIIVAKAST-SSTDGSKANLEVKNI-KQGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMPT
        MAS+ MT SFL  T   K    + +R ++VA A+  +  +  + + E K     GRRE++ AA   A  S+A VA A EPKRG+AEAK+ YAPVCVTMPT
Subjt:  MASMAMTASFLPVT--AKHPSAVARRGIIVAKAST-SSTDGSKANLEVKNI-KQGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMPT

Query:  ASICR
        A ICR
Subjt:  ASICR

Q39195 Photosystem II 5 kDa protein, chloroplastic1.3e-1657.14Show/hide
Query:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQG--RRELVAAAVTVAAASLAKVAMA--DEPKRGTAEAKQKYAPVCVTMPT
        MASM MTA+F P  AK PSA   R + V +ASTS    S   LEVK       RR+L+  A   A  SLAKVAMA  +EPKRGT  AK+KYA VCVTMPT
Subjt:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQG--RRELVAAAVTVAAASLAKVAMA--DEPKRGTAEAKQKYAPVCVTMPT

Query:  ASICR
        A ICR
Subjt:  ASICR

Arabidopsis top hitse value%identityAlignment
AT1G51400.1 Photosystem II 5 kD protein1.1e-1856.19Show/hide
Query:  MASMAMTASFLPVTAKHP---SAVARRGIIVAKASTSSTDGSKANLEVKNIKQGRRELVAAAVTVAAASLAKVAMA-DEPKRGTAEAKQKYAPVCVTMPT
        MASM MT+SFLP  +  P   S+ +RR + V KAS S    S  N + +   + RR+LV  A   A  SLAKVAMA DEPKRGT  AK+KYAPVCVTMPT
Subjt:  MASMAMTASFLPVTAKHP---SAVARRGIIVAKASTSSTDGSKANLEVKNIKQGRRELVAAAVTVAAASLAKVAMA-DEPKRGTAEAKQKYAPVCVTMPT

Query:  ASICR
        A ICR
Subjt:  ASICR

AT3G21055.1 photosystem II subunit T9.3e-1857.14Show/hide
Query:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQG--RRELVAAAVTVAAASLAKVAMA--DEPKRGTAEAKQKYAPVCVTMPT
        MASM MTA+F P  AK PSA   R + V +ASTS    S   LEVK       RR+L+  A   A  SLAKVAMA  +EPKRGT  AK+KYA VCVTMPT
Subjt:  MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQG--RRELVAAAVTVAAASLAKVAMA--DEPKRGTAEAKQKYAPVCVTMPT

Query:  ASICR
        A ICR
Subjt:  ASICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCATGGCTATGACAGCCTCCTTCCTCCCCGTCACGGCCAAGCACCCCTCCGCCGTCGCCCGGAGAGGCATCATCGTCGCCAAGGCCTCCACCTCCAGTACTGA
TGGGTCCAAGGCCAACTTGGAAGTGAAGAACATCAAGCAGGGACGGAGGGAGTTGGTGGCGGCGGCCGTCACGGTGGCTGCGGCCAGCTTGGCGAAGGTGGCCATGGCGG
ACGAGCCGAAGCGCGGCACTGCAGAAGCCAAGCAGAAGTATGCGCCGGTGTGCGTCACAATGCCCACTGCAAGCATCTGTCGCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCATGGCTATGACAGCCTCCTTCCTCCCCGTCACGGCCAAGCACCCCTCCGCCGTCGCCCGGAGAGGCATCATCGTCGCCAAGGCCTCCACCTCCAGTACTGA
TGGGTCCAAGGCCAACTTGGAAGTGAAGAACATCAAGCAGGGACGGAGGGAGTTGGTGGCGGCGGCCGTCACGGTGGCTGCGGCCAGCTTGGCGAAGGTGGCCATGGCGG
ACGAGCCGAAGCGCGGCACTGCAGAAGCCAAGCAGAAGTATGCGCCGGTGTGCGTCACAATGCCCACTGCAAGCATCTGTCGCAAGTGA
Protein sequenceShow/hide protein sequence
MASMAMTASFLPVTAKHPSAVARRGIIVAKASTSSTDGSKANLEVKNIKQGRRELVAAAVTVAAASLAKVAMADEPKRGTAEAKQKYAPVCVTMPTASICRK