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Sgr023848 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr023848
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionGlycine-rich RNA binding protein
Genome locationtig00000892:7532909..7533753
RNA-Seq ExpressionSgr023848
SyntenySgr023848
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8708366.1 Glycine-rich RNA-binding protein GRP1A [Hibiscus syriacus]5.9e-2185Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATD +ALEEAFST+GEI+E+KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

KAG8474165.1 hypothetical protein CXB51_033732 [Gossypium anomalum]4.5e-2186.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA++DVEYRCFVGGLAWATD +ALEEAFS YGEIVE+KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

XP_022146146.1 glycine-rich RNA-binding, abscisic acid-inducible protein-like [Momordica charantia]1.2e-2190Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATDSQALEEAFS YG IVEAKIVNDR+TGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

XP_039006833.1 glycine-rich RNA-binding protein GRP1A-like [Hibiscus syriacus]5.9e-2185Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATD +ALEEAFST+GEIVE+KI+NDRETGRSRGFGF+TF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

XP_039015401.1 glycine-rich RNA-binding protein GRP1A-like [Hibiscus syriacus]4.5e-2186.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATD +ALEEAFST+GEIVE+KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

TrEMBL top hitse value%identityAlignment
A0A1U8M6S8 glycine-rich RNA-binding protein GRP1A-like2.2e-2186.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA++DVEYRCFVGGLAWATD +ALEEAFS YGEIVE+KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

A0A6A2ZF12 Blt801 protein2.2e-2186.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATD +ALEEAFST+GEIVE+KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

A0A6A3A376 Blt801 protein2.9e-2185Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATD +ALEEAFST+GEIVE+KI+NDRETGRSRGFGF+TF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

A0A6J1CYG2 glycine-rich RNA-binding, abscisic acid-inducible protein-like5.8e-2290Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MAA+DVE+RCFVGGLAWATDSQALEEAFS YG IVEAKIVNDR+TGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

G7JHA8 RNA-binding (RRM/RBD/RNP motif) family protein2.9e-2183.33Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA++DVEYRCFVGGLAWATDS+ALE+AFS YGEI+++KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

SwissProt top hitse value%identityAlignment
P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein5.2e-2072.88Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDE
        MAA+DVEYRCFVGGLAWAT +++LE AF++YGEI+++K++ DRETGRSRGFGFVTF  E
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDE

P49310 Glycine-rich RNA-binding protein GRP1A3.3e-2280Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA+ DVEYRCFVGGLAWATD +ALE AFS YGE++++KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

P49311 Glycine-rich RNA-binding protein GRP2A1.2e-2178.33Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA+ DVEYRCFVGGLAWATD ++LE AFS +GE+V++KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

Q03250 Glycine-rich RNA-binding protein 77.3e-2276.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA+ DVEYRCFVGGLAWATD +ALE AF+ YG+++++KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

Q03878 Glycine-rich RNA-binding protein1.5e-1973.68Show/hide
Query:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        ++VEYRCFVGGLAWAT+ ++LE+AFS +G+I ++KI+NDRETGRSRGFGFVTF DEK
Subjt:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 25.2e-2376.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA+ DVEYRCFVGGLAWATD +ALE AF+ YG+++++KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

AT2G21660.2 cold, circadian rhythm, and rna binding 25.2e-2376.67Show/hide
Query:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        MA+ DVEYRCFVGGLAWATD +ALE AF+ YG+++++KI+NDRETGRSRGFGFVTF DEK
Subjt:  MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

AT4G39260.1 cold, circadian rhythm, and RNA binding 12.0e-1968.42Show/hide
Query:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        S+VEYRCFVGGLAWAT+ + L+  FS +G+++++KI+NDRE+GRSRGFGFVTF DEK
Subjt:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

AT4G39260.2 cold, circadian rhythm, and RNA binding 12.0e-1968.42Show/hide
Query:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        S+VEYRCFVGGLAWAT+ + L+  FS +G+++++KI+NDRE+GRSRGFGFVTF DEK
Subjt:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK

AT4G39260.3 cold, circadian rhythm, and RNA binding 12.0e-1968.42Show/hide
Query:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK
        S+VEYRCFVGGLAWAT+ + L+  FS +G+++++KI+NDRE+GRSRGFGFVTF DEK
Subjt:  SDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTCTGATGTTGAGTACCGTTGCTTCGTGGGTGGCCTCGCCTGGGCCACTGACAGTCAAGCCTTAGAGGAGGCTTTCTCTACCTATGGCGAGATCGTGGAAGC
GAAGATTGTTAACGATCGTGAGACTGGAAGGTCGAGGGGATTTGGATTCGTGACGTTCGTCGACGAGAAGCAAGAGGAGGTGGCGGCGGTGGCGGCGGCGGATACAACCG
CAGTGGTGGTGGTGGATACGGCGGTGGACGCCGTGAAGGTGGAGGATACAGCCGCGGAGGTGGTGGCTATGGTGGTGGTGGAGGCGGATATGGAGGAGGTGGTTACGGTG
GTGGACGTGACCGTGGCTACGGCGGAGGTGATGGTGGTTCCCGCTACTCCAGGGGTGGAGGCGGCGGCGGATCTGAAGGAGGCTGGAGAAATTAGGTGGCGCCGGTGGCG
CGTTATGATTTTAGCTATGGATTTGGAAGTATTAGTGTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCTCTGATGTTGAGTACCGTTGCTTCGTGGGTGGCCTCGCCTGGGCCACTGACAGTCAAGCCTTAGAGGAGGCTTTCTCTACCTATGGCGAGATCGTGGAAGC
GAAGATTGTTAACGATCGTGAGACTGGAAGGTCGAGGGGATTTGGATTCGTGACGTTCGTCGACGAGAAGCAAGAGGAGGTGGCGGCGGTGGCGGCGGCGGATACAACCG
CAGTGGTGGTGGTGGATACGGCGGTGGACGCCGTGAAGGTGGAGGATACAGCCGCGGAGGTGGTGGCTATGGTGGTGGTGGAGGCGGATATGGAGGAGGTGGTTACGGTG
GTGGACGTGACCGTGGCTACGGCGGAGGTGATGGTGGTTCCCGCTACTCCAGGGGTGGAGGCGGCGGCGGATCTGAAGGAGGCTGGAGAAATTAGGTGGCGCCGGTGGCG
CGTTATGATTTTAGCTATGGATTTGGAAGTATTAGTGTGGTGA
Protein sequenceShow/hide protein sequence
MAASDVEYRCFVGGLAWATDSQALEEAFSTYGEIVEAKIVNDRETGRSRGFGFVTFVDEKQEEVAAVAAADTTAVVVVDTAVDAVKVEDTAAEVVAMVVVEADMEEVVTV
VDVTVATAEVMVVPATPGVEAAADLKEAGEIRWRRWRVMILAMDLEVLVW