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Sgr024106 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr024106
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionRNA exonuclease 4
Genome locationtig00001047:3246994..3251172
RNA-Seq ExpressionSgr024106
SyntenySgr024106
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578645.1 hypothetical protein SDJN03_23093, partial [Cucurbita argyrosperma subsp. sororia]2.6e-7186.08Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHS HEP CA+C KHCRSLDSLREHLIGPLPKQECKN+F+ RGCKFCLAILDSS SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRDGST  +DGGRTRG+G VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

XP_008458921.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]6.8e-7285.44Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHS HEP CAIC KHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDSS SQRLHQERCQFS    GLLAR A
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRDGST ++D GRTRG+GA+ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

XP_011656270.1 RNA exonuclease 4 [Cucumis sativus]8.9e-7286.08Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHS HEP CAIC KHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAI DSS SQRLHQERCQFS    GLLAR A
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRDGST V+D GRTRG+GA+ALACKYVGGG DGS+DICAKVCLIDE ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

XP_022134351.1 RNA exonuclease 4 isoform X1 [Momordica charantia]3.6e-7387.97Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHSVHEP CAIC KHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS  SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRD S +VVDGGR R TG VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

XP_022134352.1 RNA exonuclease 4 isoform X2 [Momordica charantia]3.6e-7387.97Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHSVHEP CAIC KHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS  SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRD S +VVDGGR R TG VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

TrEMBL top hitse value%identityAlignment
A0A1S3C947 RNA exonuclease 43.3e-7285.44Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHS HEP CAIC KHCRSLDSLREHLIGPLPKQEC+NIF TRGCKFCLAILDSS SQRLHQERCQFS    GLLAR A
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRDGST ++D GRTRG+GA+ALACKYVGGG DGSLDICAKVCL+DE ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

A0A6J1BXL4 RNA exonuclease 41.7e-7387.97Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHSVHEP CAIC KHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS  SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRD S +VVDGGR R TG VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

A0A6J1BZE0 RNA exonuclease 41.7e-7387.97Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHSVHEP CAIC KHCRSLDSLREHLIGPLPKQECKNIF TRGCKFCLAILDS  SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRD S +VVDGGR R TG VALACKYVGGGGDGSLDICAKVCLIDE+ENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

A0A6J1FEK0 RNA exonuclease 41.3e-7186.08Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHS HEP CA+C KHCRSLDSLREHLIGPLPKQECKN+F+ RGCKFCLAILDSS SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRDGST  +DGGRTRG+G VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

A0A6J1JZ30 RNA exonuclease 41.3e-7186.08Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAACFRQFNKIEHLV+HMR SFHS HEP CA+C KHCRSLDSLREHLIGPLPKQECKN+F+ RGCKFCLAILDSS SQRLHQERCQFS    GLLARLA
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
        NLGIRDGST  +DGGRTRG+G VALACKYV GGGDGSLD+CAKVCLIDESENVIFYSY
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein8.4e-3642.77Show/hide
Query:  KKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGP--LPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS
        K+  +  + +C AC++ FN+ EHLVEHM+IS+HS+H+P C +C+KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + + +   H+ +C  S
Subjt:  KKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGP--LPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS

Query:  DGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
             R      +   +  + G R +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++
Subjt:  DGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

AT2G48100.2 Exonuclease family protein8.4e-3642.77Show/hide
Query:  KKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGP--LPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS
        K+  +  + +C AC++ FN+ EHLVEHM+IS+HS+H+P C +C+KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + + +   H+ +C  S
Subjt:  KKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGP--LPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS

Query:  DGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
             R      +   +  + G R +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++
Subjt:  DGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

AT2G48100.3 Exonuclease family protein8.4e-3642.77Show/hide
Query:  KKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGP--LPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS
        K+  +  + +C AC++ FN+ EHLVEHM+IS+HS+H+P C +C+KHC+S +S+REHL  P  L K  CK IF  RGC  CL I + + +   H+ +C  S
Subjt:  KKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGP--LPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS

Query:  DGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
             R      +   +  + G R +   A+AL C+ VGGG DG++D CA VCL+D+ ENVIF ++
Subjt:  DGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

AT3G27970.1 Exonuclease family protein4.9e-6065.82Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA
        +CAAC+RQFNK+EHLVEHM+IS+HS HEP C +C KHCRS +SLREHLIGPLPKQECKNIF+ RGC+FC+ IL+S NS+R+HQERCQFS    GL  R+A
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFS---DGLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
         LG+RD    ++D   +R    VAL+CK VGGG DGSLD+CA+VC+ DES+NVIF++Y
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY

AT5G40310.1 Exonuclease family protein2.2e-6067.09Show/hide
Query:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFSD---GLLARLA
        +C  C+RQFNK EHLVEHMRIS+HSVHEP C IC KHCRS DSLREHLIGPLPKQECKNIF+ RGC+FCL IL+S N++R+HQERCQ S+   GL+ R+A
Subjt:  QCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDSSNSQRLHQERCQFSD---GLLARLA

Query:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY
         LG+R+ ST  +D   +R    VAL+CK VGGG DGSLD+CA+VC+ DESENV+F++Y
Subjt:  NLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATTTCCATTCCTCCACCCCTTGGGGCTCAACGTTGGGGTGCAAAAGACCCCCGCATTAATGCCATTGGTCCTAAAAAAAATGATCTTGTGAAACAGGCACAGTG
CGCAGCTTGCTTCAGGCAATTCAACAAGATAGAACACTTGGTAGAGCATATGAGGATCTCGTTTCATTCGGTTCACGAACCCTTTTGCGCCATTTGCATGAAACACTGCA
GATCTCTCGATTCTCTCAGAGAACATCTCATTGGGCCACTTCCAAAACAAGAATGCAAAAACATCTTCAACACTCGTGGATGCAAGTTCTGCTTGGCCATCCTCGACAGC
TCTAACTCACAGAGGCTCCACCAAGAAAGATGCCAATTCTCGGATGGGCTTCTTGCTCGTCTGGCCAACTTGGGAATTCGTGACGGTTCGACCGTCGTCGTCGACGGCGG
AAGAACAAGAGGCACCGGCGCCGTCGCATTAGCCTGCAAATATGTAGGTGGCGGCGGTGATGGCTCGCTGGACATCTGCGCGAAGGTCTGCCTGATTGATGAGAGCGAAA
ATGTCATCTTCTATAGCTACGCAAGCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATTTCCATTCCTCCACCCCTTGGGGCTCAACGTTGGGGTGCAAAAGACCCCCGCATTAATGCCATTGGTCCTAAAAAAAATGATCTTGTGAAACAGGCACAGTG
CGCAGCTTGCTTCAGGCAATTCAACAAGATAGAACACTTGGTAGAGCATATGAGGATCTCGTTTCATTCGGTTCACGAACCCTTTTGCGCCATTTGCATGAAACACTGCA
GATCTCTCGATTCTCTCAGAGAACATCTCATTGGGCCACTTCCAAAACAAGAATGCAAAAACATCTTCAACACTCGTGGATGCAAGTTCTGCTTGGCCATCCTCGACAGC
TCTAACTCACAGAGGCTCCACCAAGAAAGATGCCAATTCTCGGATGGGCTTCTTGCTCGTCTGGCCAACTTGGGAATTCGTGACGGTTCGACCGTCGTCGTCGACGGCGG
AAGAACAAGAGGCACCGGCGCCGTCGCATTAGCCTGCAAATATGTAGGTGGCGGCGGTGATGGCTCGCTGGACATCTGCGCGAAGGTCTGCCTGATTGATGAGAGCGAAA
ATGTCATCTTCTATAGCTACGCAAGCCAATAA
Protein sequenceShow/hide protein sequence
MRISIPPPLGAQRWGAKDPRINAIGPKKNDLVKQAQCAACFRQFNKIEHLVEHMRISFHSVHEPFCAICMKHCRSLDSLREHLIGPLPKQECKNIFNTRGCKFCLAILDS
SNSQRLHQERCQFSDGLLARLANLGIRDGSTVVVDGGRTRGTGAVALACKYVGGGGDGSLDICAKVCLIDESENVIFYSYASQ