CuGenDBv2

Gene ID	Sgr024318
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	40S ribosomal protein S13
Genome location	tig00001291:1710937..1717686
RNA-Seq Expression	Sgr024318
Synteny	Sgr024318
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005730 - nucleolus (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domains	IPR000589 - Ribosomal protein S15 IPR009068 - S15/NS1, RNA-binding IPR012606 - Ribosomal protein S13/S15, N-terminal IPR023029 - Ribosomal protein S15P

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7036084.1 40S ribosomal protein S13, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-66

95.65

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

XP_004147576.1 40S ribosomal protein S13 [Cucumis sativus]

1.1e-66

95.65

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

XP_022157239.1 40S ribosomal protein S13-like [Momordica charantia]

1.1e-66

95.65

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDV+DNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

XP_022922396.1 40S ribosomal protein S13-like [Cucurbita moschata]

1.1e-66

95.65

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

XP_038874585.1 40S ribosomal protein S13-like [Benincasa hispida]

4.9e-67

96.38

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KMS8 Ribosomal_S13_N domain-containing protein

5.3e-67

95.65

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A1S3ATA6 40S ribosomal protein S13-like

5.3e-67

95.65

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTG+KILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A6J1DVX9 40S ribosomal protein S13-like

5.3e-67

95.65

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDV+DNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A6J1E411 40S ribosomal protein S13-like

5.3e-67

95.65

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

A0A6J1HYG9 40S ribosomal protein S13-like

5.3e-67

95.65

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

SwissProt top hits

e value

%identity

Alignment

P46298 40S ribosomal protein S13

4.8e-65

90.58

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGIS+SALPY+RT PSWLKISS DV++ ICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ER RKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

P59223 40S ribosomal protein S13-1

5.3e-64

88.41

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKR+ PSWLK +  DV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

P59224 40S ribosomal protein S13-2

1.4e-64

89.13

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKR+ PSWLK +S DV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

P62302 40S ribosomal protein S13

7.9e-68

93.48

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGIS+SALPYKRTPPSWLKISS DVE+NICKFAKKGLTPSQIGVILRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

Q69UI1 40S ribosomal protein S13-2

8.7e-59

82.61

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Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGIS+SALPYKRTPPSWLK +++DVE+ I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

Arabidopsis top hits

e value

%identity

Alignment

AT3G60770.1 Ribosomal protein S13/S15

3.8e-65

88.41

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKR+ PSWLK +  DV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

AT4G00100.1 ribosomal protein S13A

9.9e-66

89.13

Show/hide

Query:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL
        + H   KGISASALPYKR+ PSWLK +S DV+++ICKFAKKGLTPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHL
Subjt:  KAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHL

Query:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
        ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Subjt:  ERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACGAACTCCTCGCCTGATCGTCGATCAACATGCTTGATCCATCTTCCCTTTCCTTCGCCGGAACCTGAATTTCCTCCGCTCGCAGCCACGTGCGCTATATCCAAACC
CTTCCCCACCGGCAGAAACGCCGATCGCACCAGCCGCCGCGTTCCGTTATCGATTCGCCAGTTTCAGCACTCGGCTGAAGTTCTTCCTCTGGCTATCCACCACCAGAAAA
TCTATCTCCGCCAGTCCATCCATCACCTCCTCCGGCTCTCCGACGATCACTTCCGTCGCCGAGCCCGCTCTCTCCATCGCTCCGGAATATTCTCCCCTCGATCTCTCGTC
GGGAACTATGCATACATGTCTCCCTCCGGTGTGACGGCTAGCCACCGCCAGACCAATGCTCGTCGCAATCGCTCCGCCACTCGACCACGTCTCGACGATGAATTGCGCGT
TCCATCCCGCTGCCATGGCGGAGATGAGCTCCGCGACGCCGGATTCTTGATGGAGATCACACTTCACACGAAACTGAAAAACATCAACCATAAGCTCGACCAAAAAAAGA
AACAAAATTCCGCATATATAAACGTTTCTTACAGATTGAACGGTGTCGATGTAGGCTTTGGAAGCCGTCTCCGGGGACCAAACAAGCTTCATATCTTCGGGTACGCTTCT
TCTTCTCTATTGATTCGTTATCTAGGGTTTTATTCTCTCTCTCTCTGTCTCTCCGATTTCTTCTTCTCCAAATTCGCAGTTTCGCTTTCGTTTCTGAAAACAGAAAGAAA
TGATAGGGAAGAAGATGAATTGGGGTTGGGGCTTTTATTCTCTAAGGCAGAAAAATCAGCGGAGCCGAAAGCTCACGAGATCAGTAAAGGTATTTCCGCCTCTGCATTAC
CCTACAAGAGGACGCCGCCAAGTTGGCTCAAGATCTCTTCTACTGATGTTGAAGATAATATCTGCAAGTTTGCAAAGAAGGGCTTAACGCCATCTCAGATCGGTGTCATT
CTTCGGGATTCTCACGGTATCGCTCAGGTCAAAAGCGTCACTGGCAGCAAAATCTTACGTATTCTTAAAGCCCATGGGCTGGCACCGGAGATTCCGGAGGATCTTTATCA
CTTGATCAAGAAAGCAGTTTCCATCCGTAAGCATTTGGAGAGGAATAGGAAGGACAAGGACTCCAAGTTCAGATTGATTCTTGTGGAGAGCAGAATTCACAGGCTTGCTC
GCTACTACAAGAAAACCAAGAAACTTCCACCAGTTTGGAAATA

mRNA sequence

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Protein sequence

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MTNSSPDRRSTCLIHLPFPSPEPEFPPLAATCAISKPFPTGRNADRTSRRVPLSIRQFQHSAEVLPLAIHHQKIYLRQSIHHLLRLSDDHFRRRARSLHRSGIFSPRSLV
GNYAYMSPSGVTASHRQTNARRNRSATRPRLDDELRVPSRCHGGDELRDAGFLMEITLHTKLKNINHKLDQKKKQNSAYINVSYRLNGVDVGFGSRLRGPNKLHIFGYAS
SSLLIRYLGFYSLSLCLSDFFFSKFAVSLSFLKTERNDREEDELGLGLLFSKAEKSAEPKAHEISKGISASALPYKRTPPSWLKISSTDVEDNICKFAKKGLTPSQIGVI
LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKX

Sgr024318 (gene) of Monk fruit (Qingpiguo) v1 genome