| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.1e-48 | 45.34 | Show/hide |
Query: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
T NPA+ +W RQDRL+SSWLLGSM+E+IL+ M+ C SA+EIWETL+ I+S+ + MQ K +L N+KKG M +K+Y K+ VD+L ++ +S +H
Subjt: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
Query: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
I++IL+GLGSDY S++SVISA++ +QE+ +LL+T E++ E + S+ +LPSV++V Q EK + S T++ N+HN S N RGGR GRS
Subjt: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
+RG R N ++PQCQ C K G++A +C+ + NS ++P N
Subjt: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.1e-48 | 45.34 | Show/hide |
Query: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
T NPA+ +W RQDRL+SSWLLGSM+E+IL+ M+ C SA+EIWETL+ I+S+ + MQ K +L N+KKG M +K+Y K+ VD+L ++ +S +H
Subjt: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
Query: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
I++IL+GLGSDY S++SVISA++ +QE+ +LL+T E++ E + S+ +LPSV++V Q EK + S T++ N+HN S N RGGR GRS
Subjt: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
+RG R N ++PQCQ C K G++A +C+ + NS ++P N
Subjt: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
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| XP_022136882.1 dr1-associated corepressor homolog isoform X1 [Momordica charantia] | 8.3e-49 | 49.54 | Show/hide |
Query: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
+QD+L++SWL SM E+IL M+ CN+ARE+W+ LE +Y++ N ++MQLK +L+N+KKG + +KDY KVK+LVDSL A G K+++++HI+ IL+GL S
Subjt: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
Query: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
+++S VSVISA+++ + LQE+Y+LL++HE R ERN+ IN+DG+LPSV+L Q K+SNS + NNR +G + R R WN+N+
Subjt: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
Query: RPQCQFCGKFGHTAIKCY
RPQCQ GKFGHTA++CY
Subjt: RPQCQFCGKFGHTAIKCY
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| XP_022136883.1 dr1-associated corepressor homolog isoform X2 [Momordica charantia] | 8.3e-49 | 49.54 | Show/hide |
Query: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
+QD+L++SWL SM E+IL M+ CN+ARE+W+ LE +Y++ N ++MQLK +L+N+KKG + +KDY KVK+LVDSL A G K+++++HI+ IL+GL S
Subjt: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
Query: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
+++S VSVISA+++ + LQE+Y+LL++HE R ERN+ IN+DG+LPSV+L Q K+SNS + NNR +G + R R WN+N+
Subjt: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
Query: RPQCQFCGKFGHTAIKCY
RPQCQ GKFGHTA++CY
Subjt: RPQCQFCGKFGHTAIKCY
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| XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia] | 8.6e-54 | 48.61 | Show/hide |
Query: QNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHI
QNPA+ W +QD+L+S+WLLGSMNEDILS M+ C SAREIW LE ++++ ++MQLK +L+N KKG +S+KDY K+K+LVDSL G K+S ++HI
Subjt: QNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHI
Query: VFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGS--HTQQSNNNRGGRNGGRS
+ IL+GLG ++D+I+SVI+A++ P+ LQE+ +LL+ E R ERN +INSDGSLPSV+L N+++ K N H + QSN ++ GR
Subjt: VFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGS--HTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLHELNSQRFAPGFQNFQNFSP
S R W N++PQCQ CG+FGHTA++CY E N F N FSP
Subjt: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLHELNSQRFAPGFQNFQNFSP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-48 | 45.34 | Show/hide |
Query: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
T NPA+ +W RQDRL+SSWLLGSM+E+IL+ M+ C SA+EIWETL+ I+S+ + MQ K +L N+KKG M +K+Y K+ VD+L ++ +S +H
Subjt: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
Query: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
I++IL+GLGSDY S++SVISA++ +QE+ +LL+T E++ E + S+ +LPSV++V Q EK + S T++ N+HN S N RGGR GRS
Subjt: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
+RG R N ++PQCQ C K G++A +C+ + NS ++P N
Subjt: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.0e-48 | 45.34 | Show/hide |
Query: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
T NPA+ +W RQDRL+SSWLLGSM+E+IL+ M+ C SA+EIWETL+ I+S+ + MQ K +L N+KKG M +K+Y K+ VD+L ++ +S +H
Subjt: TQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEH
Query: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
I++IL+GLGSDY S++SVISA++ +QE+ +LL+T E++ E + S+ +LPSV++V Q EK + S T++ N+HN S N RGGR GRS
Subjt: IVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLV-QNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
+RG R N ++PQCQ C K G++A +C+ + NS ++P N
Subjt: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLH--ELNSQRFAPGFQN
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| A0A6J1C6N9 dr1-associated corepressor homolog isoform X1 | 4.0e-49 | 49.54 | Show/hide |
Query: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
+QD+L++SWL SM E+IL M+ CN+ARE+W+ LE +Y++ N ++MQLK +L+N+KKG + +KDY KVK+LVDSL A G K+++++HI+ IL+GL S
Subjt: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
Query: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
+++S VSVISA+++ + LQE+Y+LL++HE R ERN+ IN+DG+LPSV+L Q K+SNS + NNR +G + R R WN+N+
Subjt: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
Query: RPQCQFCGKFGHTAIKCY
RPQCQ GKFGHTA++CY
Subjt: RPQCQFCGKFGHTAIKCY
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| A0A6J1C8R2 dr1-associated corepressor homolog isoform X2 | 4.0e-49 | 49.54 | Show/hide |
Query: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
+QD+L++SWL SM E+IL M+ CN+ARE+W+ LE +Y++ N ++MQLK +L+N+KKG + +KDY KVK+LVDSL A G K+++++HI+ IL+GL S
Subjt: RQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSGLGS
Query: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
+++S VSVISA+++ + LQE+Y+LL++HE R ERN+ IN+DG+LPSV+L Q K+SNS + NNR +G + R R WN+N+
Subjt: DYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWNNNS
Query: RPQCQFCGKFGHTAIKCY
RPQCQ GKFGHTA++CY
Subjt: RPQCQFCGKFGHTAIKCY
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| A0A6J1DLT9 uncharacterized protein LOC111021757 | 4.1e-54 | 48.61 | Show/hide |
Query: QNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHI
QNPA+ W +QD+L+S+WLLGSMNEDILS M+ C SAREIW LE ++++ ++MQLK +L+N KKG +S+KDY K+K+LVDSL G K+S ++HI
Subjt: QNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHI
Query: VFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGS--HTQQSNNNRGGRNGGRS
+ IL+GLG ++D+I+SVI+A++ P+ LQE+ +LL+ E R ERN +INSDGSLPSV+L N+++ K N H + QSN ++ GR
Subjt: VFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGS--HTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLHELNSQRFAPGFQNFQNFSP
S R W N++PQCQ CG+FGHTA++CY E N F N FSP
Subjt: SRGGRQWNNNSRPQCQFCGKFGHTAIKCYSLHELNSQRFAPGFQNFQNFSP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.0e-04 | 23.53 | Show/hide |
Query: WSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLK-KGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSG
W + +R S ++ +++ L+ +AR+I E L+ +Y + + L+ +L +LK MS+ + L+ L A G KI + I +L
Subjt: WSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLK-KGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSG
Query: LGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWN
L S YD I++ I S +E L L++ I +D + S ++ ++NNNT K N T+ +G N
Subjt: LGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQWN
Query: NNSRPQCQFCGKFGHTAIKCY
+ + +C CG+ GH C+
Subjt: NNSRPQCQFCGKFGHTAIKCY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-04 | 22.53 | Show/hide |
Query: WSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKG-GMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSG
W+ D +S + +++D++++++ ++AR IW LE +Y + + LK QL L G + ++ L+ L +G KI ++ + +L+
Subjt: WSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKG-GMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILSG
Query: LGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNS-NNNTSKGNFHNGSHTQQSN
L S YD++ + I L+++ + L+ +E R N +L + +++++SSN+ + ++G N S ++ N
Subjt: LGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNS-NNNTSKGNFHNGSHTQQSN
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.8e-21 | 29.92 | Show/hide |
Query: PTQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQE
P NP + W RQD+L+ S +LG+++ + + +A +IWETL +IY+ + + QL+ QL+ KG +I DY+ + + D L +G + E
Subjt: PTQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQE
Query: HIVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
+ +L L +Y ++ I+AK P L EI+ L+ HE+++ ++S +P + ++ +NNN + GN +N NNN + +S
Subjt: HIVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRS
Query: SRGGRQWNNNSRP---QCQFCGKFGHTAIKC----YSLHELNSQRFAPGFQNFQ
S NN S+P +CQ CG GH+A +C + L +NSQ+ F +Q
Subjt: SRGGRQWNNNSRP---QCQFCGKFGHTAIKC----YSLHELNSQRFAPGFQNFQ
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 2.8e-15 | 27.92 | Show/hide |
Query: MPTQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQ
+P NP + W RQD+L+ S +LG+++ + + +A +IWETL +IY+ + + QL+ ++ + D L +G +
Subjt: MPTQNPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQ
Query: EHIVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGR
E + +L L DY ++ I+AK P L EI+ L+ E++L +NS +P + N N+N N ++ N G + +NNN +
Subjt: EHIVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGR
Query: SSRGGRQWNNNSRP---QCQFCGKFGHTAIKCYSLHELNS
SS G R N +P +CQ C GH+A +C LH+ S
Subjt: SSRGGRQWNNNSRP---QCQFCGKFGHTAIKCYSLHELNS
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 3.4e-08 | 28.05 | Show/hide |
Query: NPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSL
+P + W + + ++ WL+ SM + +L ++ +A ++WE L R++ +KI QL+ +L L++GG S+++Y K+ +
Subjt: NPAFVIWSRQDRLMSSWLLGSMNEDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSL
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.9e-06 | 25.69 | Show/hide |
Query: MPTQNPAFVIWSRQDRLMSSWLLGSMN-EDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISI
+PT N V W ++D ++ L G++ + V +++R+IW ++ + + + ++L +L+ G M + DY K+K L DSL V ++
Subjt: MPTQNPAFVIWSRQDRLMSSWLLGSMN-EDILSHMVGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISI
Query: QEHIVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINS---DGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGR
+ ++++L+GL +D+I++VI + + +L E+RL+R N D S S L + E +N S GN + NN GR
Subjt: QEHIVFILSGLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINS---DGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGR
Query: NGGRSSRGGRQWNNNSRP
G S +N+ +RP
Subjt: NGGRSSRGGRQWNNNSRP
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 9.6e-11 | 27.32 | Show/hide |
Query: WSRQDRLMSSWLLGSMNEDILSHM--VGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILS
W +D L+ W+ G++ + +L + VGC +AR++W +LE ++ + + +Q + +L+ +S+ +Y K+KSL D L V + IS + ++ +L+
Subjt: WSRQDRLMSSWLLGSMNEDILSHM--VGCNSAREIWETLERIYSTSNTVKIMQLKGQLQNLKKGGMSIKDYVAKVKSLVDSLHAVGNKISIQEHIVFILS
Query: GLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQW
GL YD I++VI KS E ++L+ E+RL + S S + + N + +HN + ++ GG SS G
Subjt: GLGSDYDSIVSVISAKSKPKPLQEIYALLMTHENRLERNAVINSDGSLPSVDLVQNFEKSSNSNNNTSKGNFHNGSHTQQSNNNRGGRNGGRSSRGGRQW
Query: NNNSR
NNN R
Subjt: NNNSR
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