CuGenDBv2

Gene ID	Sgr024897
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	30S ribosomal protein S1, chloroplastic
Genome location	tig00002486:3891053..3891590
RNA-Seq Expression	Sgr024897
Synteny	Sgr024897
Gene Ontology terms	GO:0005840 - ribosome (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052175.1 30S ribosomal protein S1 [Cucumis melo var. makuwa]

4.5e-42

86.41

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS +H  NK+RSL V AAVISGPIPS QTKERFKLKE+FE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KVL
        KV+
Subjt:  KVL

XP_004147619.1 30S ribosomal protein S1, chloroplastic [Cucumis sativus]

1.0e-41

86.27

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS +H  NK+RSL V AAVISGPIPS QT+ERFKLKE+FE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

XP_008438974.1 PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo]

7.8e-42

87.25

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS +H  NK+RSL V AAVISGPIPS QTKERFKLKE+FE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

XP_022138241.1 30S ribosomal protein S1, chloroplastic [Momordica charantia]

6.3e-44

91.18

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLS PFSPRH QNKARSL V AAVIS PIPS QTKERFKLKE+FEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

XP_038878013.1 30S ribosomal protein S1, chloroplastic-like [Benincasa hispida]

2.0e-42

88.24

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS RH Q+KARSL V AAVISGPIPS QTKERFKLKE+FE+AYERCRNAPVEGI+FTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5E7 Uncharacterized protein

4.9e-42

86.27

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS +H  NK+RSL V AAVISGPIPS QT+ERFKLKE+FE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

A0A1S3AXL6 30S ribosomal protein S1, chloroplastic

3.8e-42

87.25

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS +H  NK+RSL V AAVISGPIPS QTKERFKLKE+FE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

A0A5A7UEP7 30S ribosomal protein S1

2.2e-42

86.41

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLSKPFS +H  NK+RSL V AAVISGPIPS QTKERFKLKE+FE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KVL
        KV+
Subjt:  KVL

A0A6J1C966 30S ribosomal protein S1, chloroplastic

3.1e-44

91.18

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQFTGLRC PLSSSRLS PFSPRH QNKARSL V AAVIS PIPS QTKERFKLKE+FEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

A0A6J1F6H4 30S ribosomal protein S1, chloroplastic-like

6.0e-40

82.35

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Query:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT
        MASM QQF GLRC PLSSSRLSKPFS RH QN+ARSL V AAVI+ PIPS Q KERFKLKEIFE+AYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GT
Subjt:  MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGT

Query:  KV
        KV
Subjt:  KV

SwissProt top hits

e value

%identity

Alignment

P29344 30S ribosomal protein S1, chloroplastic

2.1e-29

63.11

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Query:  MASMVQQFT-GLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMG
        MAS+ QQ   GLRC PLS+S LSKPFSP+HT  K R   +++AV    + +AQT+ER KLK++FEDAYERCRNAP+EG+SFT++DFH AL+KYDF+SEMG
Subjt:  MASMVQQFT-GLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMG

Query:  TKV
        ++V
Subjt:  TKV

Q93VC7 30S ribosomal protein S1, chloroplastic

3.6e-26

59.05

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Query:  MASMVQQFTGLRCGPL-SSSRLSKPFSPRHTQNKARSLS--VLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSE
        MAS+ QQF+GLRC PL SSSRLS+  S    QNK+ S+S  ++AAV    + S QTKER +LK++FEDAYERCR +P+EG++FT++DF AA+E+YDF+SE
Subjt:  MASMVQQFTGLRCGPL-SSSRLSKPFSPRHTQNKARSLS--VLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSE

Query:  MGTKV
        +GT+V
Subjt:  MGTKV

Arabidopsis top hits

e value

%identity

Alignment

AT5G30510.1 ribosomal protein S1

2.6e-27

59.05

Show/hide

Query:  MASMVQQFTGLRCGPL-SSSRLSKPFSPRHTQNKARSLS--VLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSE
        MAS+ QQF+GLRC PL SSSRLS+  S    QNK+ S+S  ++AAV    + S QTKER +LK++FEDAYERCR +P+EG++FT++DF AA+E+YDF+SE
Subjt:  MASMVQQFTGLRCGPL-SSSRLSKPFSPRHTQNKARSLS--VLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSE

Query:  MGTKV
        +GT+V
Subjt:  MGTKV

Sequences

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CDS sequence

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ATGGCTTCCATGGTTCAGCAGTTCACTGGCTTGAGATGTGGGCCTCTGTCTTCATCGCGTCTCTCGAAGCCATTTTCTCCGAGGCATACGCAGAACAAGGCCCGTTCACT
TTCAGTTCTCGCCGCAGTTATATCGGGCCCCATTCCCAGTGCACAGACCAAGGAGCGTTTCAAGCTGAAGGAGATCTTCGAGGATGCCTATGAACGCTGCCGTAATGCCC
CCGTTGAAGGCATCTCCTTTACTCTCGAGGACTTCCATGCCGCTCTCGAGAAATACGATTTCGATTCTGAAATGGGAACCAAGGTGTTGTTACTGCTTCTTTCTCTTGTA
ATTAATTTTGTGGATTTTCTTGTCGATTACACTGGAAGGGATATTATGAGCTTGAATGTGTTATCTTCTAGTTCGTCGTGTAATTTTGTGAACTTTGTTGTCAATTTCAC
TGGAAGGGATGTTATGAACTTGAATG

mRNA sequence

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Protein sequence

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MASMVQQFTGLRCGPLSSSRLSKPFSPRHTQNKARSLSVLAAVISGPIPSAQTKERFKLKEIFEDAYERCRNAPVEGISFTLEDFHAALEKYDFDSEMGTKVLLLLLSLV
INFVDFLVDYTGRDIMSLNVLSSSSSCNFVNFVVNFTGRDVMNLNX

Sgr024897 (gene) of Monk fruit (Qingpiguo) v1 genome