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Sgr024927 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr024927
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description50S ribosomal protein L18
Genome locationtig00002486:4282247..4285971
RNA-Seq ExpressionSgr024927
SyntenySgr024927
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR004389 - Ribosomal protein L18, bacterial-type
IPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018533.1 50S ribosomal protein L18, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]3.0e-7185.29Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        MS+ATAPLSFLGS+FL  S  Q LRNR Q N PA TSSSG+HSL V+AKATTRREDR ARH RIRKKVEGTSERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+++GPTIEVA+KVGEAIAKSCLEKGI+KVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

XP_008439021.1 PREDICTED: 50S ribosomal protein L18, chloroplastic [Cucumis melo]1.7e-7184.71Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        M++ TAP SFLG++FLSVS  Q + NRP  + PA TSSSGRHSLVVEAKATTRREDR ARH RIRKKVEGT+ERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+S+GPTIEVA+KVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

XP_022137866.1 50S ribosomal protein L18, chloroplastic [Momordica charantia]5.8e-7588.24Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        MS A +P SFLGS+FLSVS PQKLRNRPQ N P PTSSSGRHSL+VEAKATTRREDR ARH RIRKKVEGT ERPRLSV+RSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        +ASTMQKSISE LD+SSGPTIEVA+KVGE IAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

XP_022979945.1 50S ribosomal protein L18, chloroplastic-like [Cucurbita maxima]3.0e-7185.29Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        MS+ATAPLSFLGS+FL  S  Q LRNR Q N PA TSSSG+HSL V+AKATTRREDR ARH RIRKKVEGTSERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+++GPTIEVA+KVGEAIAKSCLEKGI+KVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

XP_038885362.1 50S ribosomal protein L18, chloroplastic-like [Benincasa hispida]3.2e-7386.47Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        M++ATAPLSFLG++FLSVS  Q LRNRP  + PA TSSSGRHSLVVEA+ATTRREDR+ARH RIRKKVEGT+ERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+S+GPTIEVA+KVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

TrEMBL top hitse value%identityAlignment
A0A0A0L9A4 Uncharacterized protein2.1e-7082.94Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        M++ TAP SFL ++FL+VS  Q + NRP  + P  TSSSGRHSLVVEAKATTRREDRTARH RIRKKVEGT+ERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+S+GPTIEVA+K+GEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

A0A1S3AXQ6 50S ribosomal protein L18, chloroplastic8.4e-7284.71Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        M++ TAP SFLG++FLSVS  Q + NRP  + PA TSSSGRHSLVVEAKATTRREDR ARH RIRKKVEGT+ERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+S+GPTIEVA+KVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

A0A5A7UA63 50S ribosomal protein L188.4e-7284.71Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        M++ TAP SFLG++FLSVS  Q + NRP  + PA TSSSGRHSLVVEAKATTRREDR ARH RIRKKVEGT+ERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+S+GPTIEVA+KVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

A0A6J1C7Y4 50S ribosomal protein L18, chloroplastic2.8e-7588.24Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        MS A +P SFLGS+FLSVS PQKLRNRPQ N P PTSSSGRHSL+VEAKATTRREDR ARH RIRKKVEGT ERPRLSV+RSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        +ASTMQKSISE LD+SSGPTIEVA+KVGE IAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

A0A6J1IUS1 50S ribosomal protein L18, chloroplastic-like1.4e-7185.29Show/hide
Query:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA
        MS+ATAPLSFLGS+FL  S  Q LRNR Q N PA TSSSG+HSL V+AKATTRREDR ARH RIRKKVEGTSERPRLSVFRSNKH+YVQVIDDSKMHTLA
Subjt:  MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLA

Query:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        + STMQKSISE LD+++GPTIEVA+KVGEAIAKSCLEKGI+KVAFDRGGYPYHGRVEALADAAREHGLQF
Subjt:  SASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

SwissProt top hitse value%identityAlignment
C5D3T3 50S ribosomal protein L182.0e-3364.41Show/hide
Query:  RREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPY
        R   R  RH R+RKK+ GT+ERPRL+VFRSNKHIY Q+IDD K  T+ SAST+ K    E D  S   IE A+KVGE +AK  LEKGI KV FDRGGY Y
Subjt:  RREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPY

Query:  HGRVEALADAAREHGLQF
        HGRV+ALADAARE GL+F
Subjt:  HGRVEALADAAREHGLQF

P82195 50S ribosomal protein L18, chloroplastic6.9e-5566.85Show/hide
Query:  MSTATAPLSFLGSAFLS--------VSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVID
        M+ AT+ LSF  S   S        +S P K  N     LP           +++AKA TRREDRTARH RIRKKVEGT ERPRL VFRSNKH+YVQVID
Subjt:  MSTATAPLSFLGSAFLS--------VSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVID

Query:  DSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        D+KMHTLA+ASTMQK+ISE +D+S+GPT+EVA+K+GE IAKSCLEKGITKVAFDRGGYPYHGRV+ALADAAREHGL F
Subjt:  DSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

Q5L3S3 50S ribosomal protein L181.5e-3365.25Show/hide
Query:  RREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPY
        R   R  RH RIRKK+ GT+ERPRLSVFRSNKHIY Q+IDD+K  T+ SAST+ K    E    S   IE A+KVGE +AK  LEKGI KV FDRGGY Y
Subjt:  RREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPY

Query:  HGRVEALADAAREHGLQF
        HGRV+ALADAARE GL+F
Subjt:  HGRVEALADAAREHGLQF

Q8SAY0 50S ribosomal protein L18, chloroplastic3.1e-4766.9Show/hide
Query:  PQPNLPAPTSSSGRHSLVVEA--KATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVAR
        P  + P+P+ +  R SLVV A  K +T + DR ARH R+RKKV GT+ERPRLSVFRSNKH+Y QVIDD+K  TL SASTM KS+S++L++S+GPT+EVA+
Subjt:  PQPNLPAPTSSSGRHSLVVEA--KATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVAR

Query:  KVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        K+GE IAKSCLEKGITKV FDRGG+ YHGR++ALADAARE+GL F
Subjt:  KVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

Q9SX68 50S ribosomal protein L18, chloroplastic2.0e-5479.71Show/hide
Query:  PAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIA
        P  +SS    S+VVEAK  T  EDR ARH RIRKKV GT+ERPRL VFRSNKH+YVQVIDD+KMHTLASAST QK ISEE D++SGPTIEVA+KVGE IA
Subjt:  PAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIA

Query:  KSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        KSCLEKGITKVAFDRGGYPYHGR+EALA AAREHGLQF
Subjt:  KSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

Arabidopsis top hitse value%identityAlignment
AT1G14205.1 Ribosomal L18p/L5e family protein1.4e-1535.98Show/hide
Query:  APLSFLGSAFLSVSCPQKLRNRPQPNLPAP-TSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASAST
        A L+ L +    VS     R +P P  P   T+ S     V+EA+  TR E    R+ R RKK  GT  +PRLSVF S+K +Y  ++DD     L  AST
Subjt:  APLSFLGSAFLSVSCPQKLRNRPQPNLPAP-TSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASAST

Query:  MQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKV-AFDRGGYPYHGRVEALADAAREHG
        +QKSI  +   +    IE A++VGE + K+ ++  I ++ ++DR G     R++A   A  +HG
Subjt:  MQKSISEELDFSSGPTIEVARKVGEAIAKSCLEKGITKV-AFDRGGYPYHGRVEALADAAREHG

AT1G48350.1 Ribosomal L18p/L5e family protein1.4e-5579.71Show/hide
Query:  PAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIA
        P  +SS    S+VVEAK  T  EDR ARH RIRKKV GT+ERPRL VFRSNKH+YVQVIDD+KMHTLASAST QK ISEE D++SGPTIEVA+KVGE IA
Subjt:  PAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSISEELDFSSGPTIEVARKVGEAIA

Query:  KSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        KSCLEKGITKVAFDRGGYPYHGR+EALA AAREHGLQF
Subjt:  KSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

AT3G17626.1 structural constituent of ribosome3.5e-0971.05Show/hide
Query:  SGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHG
        +G TIE+A+KVGE I KSC+E GITKVAFDR  Y YHG
Subjt:  SGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAGCCACCGCTCCTTTATCCTTCCTCGGCAGCGCCTTTCTAAGCGTCTCTTGCCCACAGAAGCTACGCAATCGTCCTCAGCCAAATCTGCCGGCACCCACTTC
AAGTTCCGGTCGACACTCTCTTGTTGTCGAAGCCAAAGCTACCACCAGAAGAGAGGACCGGACAGCTCGCCACTATCGCATTCGGAAGAAGGTTGAAGGAACATCAGAGA
GGCCAAGGTTGTCTGTATTCCGCTCCAACAAGCATATCTACGTCCAGGTTATTGATGACTCCAAGATGCATACGCTTGCTTCTGCTTCAACAATGCAGAAATCAATCTCT
GAGGAGTTAGACTTCAGTTCTGGCCCCACCATTGAAGTGGCAAGAAAGGTGGGTGAAGCGATTGCAAAATCTTGTTTGGAGAAAGGAATTACAAAAGTTGCTTTTGACCG
TGGGGGATATCCATATCATGGACGTGTGGAAGCCCTTGCTGATGCGGCTCGTGAACATGGCCTTCAGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACAGCCACCGCTCCTTTATCCTTCCTCGGCAGCGCCTTTCTAAGCGTCTCTTGCCCACAGAAGCTACGCAATCGTCCTCAGCCAAATCTGCCGGCACCCACTTC
AAGTTCCGGTCGACACTCTCTTGTTGTCGAAGCCAAAGCTACCACCAGAAGAGAGGACCGGACAGCTCGCCACTATCGCATTCGGAAGAAGGTTGAAGGAACATCAGAGA
GGCCAAGGTTGTCTGTATTCCGCTCCAACAAGCATATCTACGTCCAGGTTATTGATGACTCCAAGATGCATACGCTTGCTTCTGCTTCAACAATGCAGAAATCAATCTCT
GAGGAGTTAGACTTCAGTTCTGGCCCCACCATTGAAGTGGCAAGAAAGGTGGGTGAAGCGATTGCAAAATCTTGTTTGGAGAAAGGAATTACAAAAGTTGCTTTTGACCG
TGGGGGATATCCATATCATGGACGTGTGGAAGCCCTTGCTGATGCGGCTCGTGAACATGGCCTTCAGTTCTAA
Protein sequenceShow/hide protein sequence
MSTATAPLSFLGSAFLSVSCPQKLRNRPQPNLPAPTSSSGRHSLVVEAKATTRREDRTARHYRIRKKVEGTSERPRLSVFRSNKHIYVQVIDDSKMHTLASASTMQKSIS
EELDFSSGPTIEVARKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF