CuGenDBv2

Gene ID	Sgr025017
Organism	Siraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Description	protein PALE CRESS, chloroplastic
Genome location	tig00002854:1337787..1358460
RNA-Seq Expression	Sgr025017
Synteny	Sgr025017
Gene Ontology terms	GO:0009658 - chloroplast organization (biological process) GO:0009965 - leaf morphogenesis (biological process) GO:0010239 - chloroplast mRNA processing (biological process) GO:0042254 - ribosome biogenesis (biological process) GO:0071482 - cellular response to light stimulus (biological process) GO:0009501 - amyloplast (cellular component) GO:0009509 - chromoplast (cellular component) GO:0009513 - etioplast (cellular component) GO:0009537 - proplastid (cellular component) GO:0042644 - chloroplast nucleoid (cellular component) GO:0019843 - rRNA binding (molecular function) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR034563 - Protein PALE CRESS

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008449384.1 PREDICTED: protein PALE CRESS, chloroplastic [Cucumis melo]

5.6e-99

89.95

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLK FPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        FD+EGWLK CRKCM+DTFPREDPFSILVPAG DIDKHQGPLRPSL  EADNTLLRVDFVREVDELL EV   QS+VQN   NA   D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRTIRLVEALLDLAMNLKW
Subjt:  QRTIRLVEALLDLAMNLKW

XP_022159473.1 protein PALE CRESS, chloroplastic [Momordica charantia]

1.5e-104

93.55

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLKGFPEEDV KARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSLEADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQR
        FDDEGWLKDCRK M+DTFPREDPFSILVP GLDIDKHQGPLRPSLEADNTLLRVDFVREVDELL EVRPD+SEVQ   ANAGG D ESVASRLKQQEKQR
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSLEADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQR

Query:  TIRLVEALLDLAMNLKW
        TIRLVEALLDL++NLKW
Subjt:  TIRLVEALLDLAMNLKW

XP_022931090.1 protein PALE CRESS, chloroplastic [Cucurbita moschata]

3.9e-100

89.95

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLKGFPEEDV KARKLVSSFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREA+PAMRLLN+LLN+YD 
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        F+DEGWLKDCRKCMIDTFPREDPFSILVPAG DIDKHQG LRPSL  EADNTLLRVDFVREVDELL EVR DQSEVQN  ANA G D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRT+RLVE LL+LAMNL+W
Subjt:  QRTIRLVEALLDLAMNLKW

XP_038888470.1 protein PALE CRESS, chloroplastic isoform X1 [Benincasa hispida]

4.2e-102

92.24

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Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        FDDEGWLK+CRK M+DTFPREDPFSILVPAG DIDKHQGPLRPSL  EADNTLLRVDFVREVDELL EV  DQSEVQN   NA G D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRTIRLVEALLDLAMNLKW
Subjt:  QRTIRLVEALLDLAMNLKW

XP_038888471.1 protein PALE CRESS, chloroplastic isoform X2 [Benincasa hispida]

4.2e-102

92.24

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        FDDEGWLK+CRK M+DTFPREDPFSILVPAG DIDKHQGPLRPSL  EADNTLLRVDFVREVDELL EV  DQSEVQN   NA G D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRTIRLVEALLDLAMNLKW
Subjt:  QRTIRLVEALLDLAMNLKW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KJC6 Uncharacterized protein

4.6e-99

89.5

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLK FPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        FD+EGWLK CRKCM+DTFPREDPFSILVPAG DIDKHQGPLRPSL  E+DNTLLRVDFVREVDELL EV   QS+VQN   NA   D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRTIRLVEALLDLAMNLKW
Subjt:  QRTIRLVEALLDLAMNLKW

A0A1S3BMU2 protein PALE CRESS, chloroplastic

2.7e-99

89.95

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLK FPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        FD+EGWLK CRKCM+DTFPREDPFSILVPAG DIDKHQGPLRPSL  EADNTLLRVDFVREVDELL EV   QS+VQN   NA   D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRTIRLVEALLDLAMNLKW
Subjt:  QRTIRLVEALLDLAMNLKW

A0A5D3E2R9 Protein PALE CRESS

2.7e-99

89.95

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLK FPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLAR DDEKDA+RSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        FD+EGWLK CRKCM+DTFPREDPFSILVPAG DIDKHQGPLRPSL  EADNTLLRVDFVREVDELL EV   QS+VQN   NA   D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRTIRLVEALLDLAMNLKW
Subjt:  QRTIRLVEALLDLAMNLKW

A0A6J1DYX0 protein PALE CRESS, chloroplastic

7.4e-105

93.55

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLKGFPEEDV KARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLN+YDG
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSLEADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQR
        FDDEGWLKDCRK M+DTFPREDPFSILVP GLDIDKHQGPLRPSLEADNTLLRVDFVREVDELL EVRPD+SEVQ   ANAGG D ESVASRLKQQEKQR
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSLEADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQR

Query:  TIRLVEALLDLAMNLKW
        TIRLVEALLDL++NLKW
Subjt:  TIRLVEALLDLAMNLKW

A0A6J1EYI4 protein PALE CRESS, chloroplastic

1.9e-100

89.95

Show/hide

Query:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG
        MRLKGFPEEDV KARKLVSSFIRA EEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREA+PAMRLLN+LLN+YD 
Subjt:  MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDG

Query:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK
        F+DEGWLKDCRKCMIDTFPREDPFSILVPAG DIDKHQG LRPSL  EADNTLLRVDFVREVDELL EVR DQSEVQN  ANA G D ESVASRLKQQEK
Subjt:  FDDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEK

Query:  QRTIRLVEALLDLAMNLKW
        QRT+RLVE LL+LAMNL+W
Subjt:  QRTIRLVEALLDLAMNLKW

SwissProt top hits

e value

%identity

Alignment

Q39089 Protein PALE CRESS, chloroplastic

7.9e-88

75.69

Show/hide

Query:  RLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGF
        RLK FPE+D+RKARKLVSSFIRAAEEVEE+IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+A+PAM+LLN+LLN++DGF
Subjt:  RLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGF

Query:  DDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQ
        +D+ WLKDCRK M +TFPREDPFSIL+P G DID HQG LRP +  E DNTLLRVDFVREVD LL EVR ++     +K    GLDPE++A + KQQEKQ
Subjt:  DDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQ

Query:  RTIRLVEALLDLAMNLKW
        RTIR +EA+LDLA+NLKW
Subjt:  RTIRLVEALLDLAMNLKW

Arabidopsis top hits

e value

%identity

Alignment

AT2G48120.1 pale cress protein (PAC)

5.6e-89

75.69

Show/hide

Query:  RLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGF
        RLK FPE+D+RKARKLVSSFIRAAEEVEE+IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+A+PAM+LLN+LLN++DGF
Subjt:  RLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGF

Query:  DDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQ
        +D+ WLKDCRK M +TFPREDPFSIL+P G DID HQG LRP +  E DNTLLRVDFVREVD LL EVR ++     +K    GLDPE++A + KQQEKQ
Subjt:  DDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQ

Query:  RTIRLVEALLDLAMNLKW
        RTIR +EA+LDLA+NLKW
Subjt:  RTIRLVEALLDLAMNLKW

AT2G48120.2 pale cress protein (PAC)

5.6e-89

75.69

Show/hide

Query:  RLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGF
        RLK FPE+D+RKARKLVSSFIRAAEEVEE+IEEAAEKGEL ELVL++IWNRLDLARRDDEKDAIRSLDLLYRRVETEILKR+A+PAM+LLN+LLN++DGF
Subjt:  RLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGF

Query:  DDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQ
        +D+ WLKDCRK M +TFPREDPFSIL+P G DID HQG LRP +  E DNTLLRVDFVREVD LL EVR ++     +K    GLDPE++A + KQQEKQ
Subjt:  DDEGWLKDCRKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSL--EADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQ

Query:  RTIRLVEALLDLAMNLKW
        RTIR +EA+LDLA+NLKW
Subjt:  RTIRLVEALLDLAMNLKW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCGTTTGAAAGGATTTCCAGAAGAAGATGTCAGAAAAGCTCGAAAACTGGTTTCAAGCTTCATTAGAGCTGCTGAAGAAGTTGAAGAGAAAATTGAGGAAGCTGCTGA
GAAAGGGGAACTCACAGAGCTTGTTCTATTAGTCATATGGAATCGACTTGATTTAGCACGTCGTGATGATGAAAAGGATGCAATTAGAAGTCTTGATCTGTTATATCGAA
GGGTTGAGACGGAAATTCTCAAACGGGAGGCTACTCCTGCGATGAGACTGCTCAACGAACTTTTGAATTTGTACGACGGCTTTGATGATGAAGGGTGGCTCAAAGATTGC
AGAAAATGCATGATTGATACCTTTCCGCGGGAGGATCCATTTAGCATTCTCGTTCCAGCTGGATTAGACATTGATAAGCATCAAGGTCCATTACGGCCATCACTTGAAGC
TGATAATACCCTATTGAGAGTAGACTTCGTCAGAGAGGTTGATGAATTGCTATTAGAAGTTCGGCCCGATCAAAGTGAAGTGCAAAATGCAAAAGCAAATGCAGGTGGAT
TGGATCCGGAATCGGTGGCAAGTAGGTTGAAACAACAGGAGAAACAACGGACAATAAGGCTGGTAGAAGCGCTGCTAGATTTGGCAATGAACTTGAAGTGGTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRLKGFPEEDVRKARKLVSSFIRAAEEVEEKIEEAAEKGELTELVLLVIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKREATPAMRLLNELLNLYDGFDDEGWLKDC
RKCMIDTFPREDPFSILVPAGLDIDKHQGPLRPSLEADNTLLRVDFVREVDELLLEVRPDQSEVQNAKANAGGLDPESVASRLKQQEKQRTIRLVEALLDLAMNLKW

Sgr025017 (gene) of Monk fruit (Qingpiguo) v1 genome