; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sgr025286 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr025286
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
Descriptionprotein WHI4
Genome locationtig00004836:1220755..1224457
RNA-Seq ExpressionSgr025286
SyntenySgr025286
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148393.1 uncharacterized protein LOC111017052 isoform X1 [Momordica charantia]2.7e-11685.38Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPDP+YSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTER-SEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTER SE V+TP NA+S PYEHHEKTDGG CSTLFIANLGPNCNEDEL EVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTER-SEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE +EQA KVMEELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

XP_022148402.1 uncharacterized protein LOC111017052 isoform X2 [Momordica charantia]1.1e-11785.71Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPDP+YSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERSEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVLS
        ELARSNSRRKHKP                         GGSEPDEPSKKTERSE V+TP NA+S PYEHHEKTDGG CSTLFIANLGPNCNEDEL EVLS
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERSEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVLS

Query:  KYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        KYPGFNVLKLRAKSGMPVAFADFE +EQA KVMEELQGSMLPSSDRGGMHIE
Subjt:  KYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

XP_022964622.1 protein WHI4 [Cucurbita moschata]1.6e-11685.38Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPD +YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTE+S E VV PGN +SAPYEHHEK DGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE IEQASKV+EELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

XP_023000385.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucurbita maxima]6.0e-11685.38Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQ YDPYYLYHQPD +YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTE+S E VV PGN +SAPYEHHEK DGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE IEQASKVMEELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

XP_023513427.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucurbita pepo subsp. pepo]7.0e-11785.77Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPD +YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTE+S E VV PGN +SAPYEHHEK DGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE IEQASKVMEELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

TrEMBL top hitse value%identityAlignment
A0A5A7V0X3 Protein WHI44.2e-11584.58Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPDP+YSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKK ++S E VVTP +AISAPYEHHEK DGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
         KYPGFNVLKLRAKSGMPVAFADFE IEQASKVMEELQGS+LPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

A0A6J1D3Z3 uncharacterized protein LOC111017052 isoform X11.3e-11685.38Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPDP+YSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTER-SEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTER SE V+TP NA+S PYEHHEKTDGG CSTLFIANLGPNCNEDEL EVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTER-SEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE +EQA KVMEELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

A0A6J1D4Z1 uncharacterized protein LOC111017052 isoform X25.3e-11885.71Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPDP+YSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERSEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVLS
        ELARSNSRRKHKP                         GGSEPDEPSKKTERSE V+TP NA+S PYEHHEKTDGG CSTLFIANLGPNCNEDEL EVLS
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERSEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVLS

Query:  KYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        KYPGFNVLKLRAKSGMPVAFADFE +EQA KVMEELQGSMLPSSDRGGMHIE
Subjt:  KYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

A0A6J1HI97 protein WHI47.6e-11785.38Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQPYDPYYLYHQPD +YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTE+S E VV PGN +SAPYEHHEK DGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE IEQASKV+EELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

A0A6J1KI66 U2 small nuclear ribonucleoprotein B'' 22.9e-11685.38Show/hide
Query:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHQ YDPYYLYHQPD +YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKTE+S E VV PGN +SAPYEHHEK DGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKTERS-EVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVL

Query:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        SKYPGFNVLKLRAKSGMPVAFADFE IEQASKVMEELQGSMLPSSDRGGMHIE
Subjt:  SKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a3.4e-1340Show/hide
Query:  QPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + + S S    + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP+S   L +E A++N++
Subjt:  QPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q6ZRY4 RNA-binding protein with multiple splicing 23.7e-1241.67Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T R  Q V F  F +   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q8VC52 RNA-binding protein with multiple splicing 23.7e-1241.67Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T R  Q V F  F +   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9W6I1 RNA-binding protein with multiple splicing 21.7e-1241.67Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9YGP5 RNA-binding protein with multiple splicing 24.4e-1342.86Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF N   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-3538.55Show/hide
Query:  AHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      S   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSN--SRRKHKPGGSEPDEPSKKTERSE-----VVVTPGNAIS---------------------APYEHHEKTDGGPCSTLFIANLGPNCNEDELKEV
        LA+SN  S+R     G E  +  K    +         TPG + S                     AP          PC TLFIAN+GPNC E EL +V
Subjt:  LARSN--SRRKHKPGGSEPDEPSKKTERSE-----VVVTPGNAIS---------------------APYEHHEKTDGGPCSTLFIANLGPNCNEDELKEV

Query:  LSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRG
         S+  GF  LK++   G PVAF DF+ +  +S+ +  LQG++L SS  G
Subjt:  LSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRG

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-3538.55Show/hide
Query:  AHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      S   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSN--SRRKHKPGGSEPDEPSKKTERSE-----VVVTPGNAIS---------------------APYEHHEKTDGGPCSTLFIANLGPNCNEDELKEV
        LA+SN  S+R     G E  +  K    +         TPG + S                     AP          PC TLFIAN+GPNC E EL +V
Subjt:  LARSN--SRRKHKPGGSEPDEPSKKTERSE-----VVVTPGNAIS---------------------APYEHHEKTDGGPCSTLFIANLGPNCNEDELKEV

Query:  LSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRG
         S+  GF  LK++   G PVAF DF+ +  +S+ +  LQG++L SS  G
Subjt:  LSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRG

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-3538.55Show/hide
Query:  AHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      S   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSN--SRRKHKPGGSEPDEPSKKTERSE-----VVVTPGNAIS---------------------APYEHHEKTDGGPCSTLFIANLGPNCNEDELKEV
        LA+SN  S+R     G E  +  K    +         TPG + S                     AP          PC TLFIAN+GPNC E EL +V
Subjt:  LARSN--SRRKHKPGGSEPDEPSKKTERSE-----VVVTPGNAIS---------------------APYEHHEKTDGGPCSTLFIANLGPNCNEDELKEV

Query:  LSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRG
         S+  GF  LK++   G PVAF DF+ +  +S+ +  LQG++L SS  G
Subjt:  LSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRG

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.1e-7052.56Show/hide
Query:  HQPYDPYYLY-------HQPD--PSYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN
        HQPYDP+Y+Y       H P   P  +D    INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+Q                  VVAFATF +
Subjt:  HQPYDPYYLY-------HQPD--PSYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN

Query:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE----------PSKKTERSEVVVTPGNAIS
        H+ A+ A++ LNGVKFDPQ+GS LHIELARSNSRRK +PG                          S+PDE              T +SE    P +   
Subjt:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE----------PSKKTERSEVVVTPGNAIS

Query:  APYEHHEK-TDGG----PCSTLFIANLGPNCNEDELKEVLSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        +   H EK ++GG     CSTLFIANLGPNC EDELK++LS+YPGF++LK+RA+ GMPVAFADFE IEQA+  M  LQG++L SSDRGGMHIE
Subjt:  APYEHHEK-TDGG----PCSTLFIANLGPNCNEDELKEVLSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-7356Show/hide
Query:  HQPYDPYYLY-------HQPD--PSYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP
        HQPYDP+Y+Y       H P   P  +D    INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+QVVAFATF +H+ A+ A++ LNGVKFDP
Subjt:  HQPYDPYYLY-------HQPD--PSYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP

Query:  QSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE----------PSKKTERSEVVVTPGNAISAPYEHHEK-TDGG----P
        Q+GS LHIELARSNSRRK +PG                          S+PDE              T +SE    P +   +   H EK ++GG     
Subjt:  QSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE----------PSKKTERSEVVVTPGNAISAPYEHHEK-TDGG----P

Query:  CSTLFIANLGPNCNEDELKEVLSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE
        CSTLFIANLGPNC EDELK++LS+YPGF++LK+RA+ GMPVAFADFE IEQA+  M  LQG++L SSDRGGMHIE
Subjt:  CSTLFIANLGPNCNEDELKEVLSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSDRGGMHIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACCAGCCTTACGATCCTTACTACCTCTACCATCAACCGGATCCGAGCTACAGTGATAGGAGCAATATCAACACGCTCTTCATCTCTGGTCTCCCAGACGACGT
CAAGGCGCGCGAGATACACAACCTTTTCCGCCGCCGACCCGGCTTTGACTCTTGCCAGCTCAAGTACACTGGCCGTGGCAATCAGGTCGTGGCATTTGCAACCTTTTACA
ATCACCAATCAGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCAGTTCTGCATATTGAACTTGCTAGGTCAAACTCTAGGAGAAAA
CATAAACCAGGAGGCAGTGAACCTGATGAACCATCAAAAAAGACTGAACGAAGCGAAGTTGTGGTGACTCCTGGTAATGCTATATCTGCTCCATATGAGCATCATGAAAA
GACTGATGGAGGACCCTGCTCCACTTTGTTTATTGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTCCAAATATCCTGGATTCAACGTGCTCA
AATTGCGTGCCAAAAGTGGAATGCCGGTTGCATTTGCTGATTTTGAGGTAATTGAACAAGCTAGCAAGGTCATGGAGGAGCTTCAGGGAAGCATGCTGCCATCATCAGAC
CGTGGCGGCATGCATATAGAAGACTCAATTGCTGCTGCCGTGAAGTTTTGTGGCATTTATCAGTCTGGTATCGCTTCAAGTGCTTGCAAACTGCACATCACTGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCACCAGCCTTACGATCCTTACTACCTCTACCATCAACCGGATCCGAGCTACAGTGATAGGAGCAATATCAACACGCTCTTCATCTCTGGTCTCCCAGACGACGT
CAAGGCGCGCGAGATACACAACCTTTTCCGCCGCCGACCCGGCTTTGACTCTTGCCAGCTCAAGTACACTGGCCGTGGCAATCAGGTCGTGGCATTTGCAACCTTTTACA
ATCACCAATCAGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCAGTTCTGCATATTGAACTTGCTAGGTCAAACTCTAGGAGAAAA
CATAAACCAGGAGGCAGTGAACCTGATGAACCATCAAAAAAGACTGAACGAAGCGAAGTTGTGGTGACTCCTGGTAATGCTATATCTGCTCCATATGAGCATCATGAAAA
GACTGATGGAGGACCCTGCTCCACTTTGTTTATTGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTCCAAATATCCTGGATTCAACGTGCTCA
AATTGCGTGCCAAAAGTGGAATGCCGGTTGCATTTGCTGATTTTGAGGTAATTGAACAAGCTAGCAAGGTCATGGAGGAGCTTCAGGGAAGCATGCTGCCATCATCAGAC
CGTGGCGGCATGCATATAGAAGACTCAATTGCTGCTGCCGTGAAGTTTTGTGGCATTTATCAGTCTGGTATCGCTTCAAGTGCTTGCAAACTGCACATCACTGCATAA
Protein sequenceShow/hide protein sequence
MAHQPYDPYYLYHQPDPSYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRK
HKPGGSEPDEPSKKTERSEVVVTPGNAISAPYEHHEKTDGGPCSTLFIANLGPNCNEDELKEVLSKYPGFNVLKLRAKSGMPVAFADFEVIEQASKVMEELQGSMLPSSD
RGGMHIEDSIAAAVKFCGIYQSGIASSACKLHITA