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Sgr025580 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr025580
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionCoatomer, beta subunit
Genome locationtig00007935:1183011..1183588
RNA-Seq ExpressionSgr025580
SyntenySgr025580
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0005198 - structural molecule activity (molecular function)
InterPro domainsIPR016460 - Coatomer beta subunit (COPB1)
IPR029446 - Coatomer beta subunit, appendage platform domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581807.1 Coatomer subunit beta-1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-34100Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

XP_008463989.1 PREDICTED: coatomer subunit beta-1-like [Cucumis melo]5.1e-3498.73Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQAD+KLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

XP_022955587.1 coatomer subunit beta-1-like [Cucurbita moschata]1.4e-34100Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

XP_023528074.1 coatomer subunit beta-1-like [Cucurbita pepo subsp. pepo]1.4e-34100Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

XP_038881165.1 coatomer subunit beta-1-like [Benincasa hispida]3.9e-3498.73Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQ DNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

TrEMBL top hitse value%identityAlignment
A0A1S3CKI7 Coatomer subunit beta2.5e-3498.73Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQAD+KLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

A0A5A7VEK6 Coatomer subunit beta2.5e-3498.73Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQAD+KLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

A0A6J1GU24 Coatomer subunit beta6.5e-35100Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

A0A6J1IRJ3 Coatomer subunit beta6.5e-35100Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

A0A6J1K8T6 Coatomer subunit beta3.2e-3498.73Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQAD KLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

SwissProt top hitse value%identityAlignment
P45437 Coatomer subunit beta1.5e-2367.09Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEK---QADNKLSGYIRIRSKTQGIALSLGDKITLKQK
        +KSTNMKCLTP  AL G+CGF+AAN+YAKS+FGE+AL N+SIEK     D+K++G+IRIR+K+QG+ALSLGDKI+  QK
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEK---QADNKLSGYIRIRSKTQGIALSLGDKITLKQK

Q0JNK5 Coatomer subunit beta-22.4e-3492.41Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLTP SAL+GECGFLAANLYAKSVFGEDALVN+SIEKQ D KLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Q53PC7 Coatomer subunit beta-11.1e-3491.14Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLTP SAL+GECGF+AANLYAKSVFGEDALVN+S+EKQAD KLSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Q9SV20 Coatomer subunit beta-23.8e-3288.61Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLT  SA+ GECGFLAANLYAKSVFGEDALVN+SIEKQ D  LSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Q9SV21 Coatomer subunit beta-11.7e-3289.87Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLT  SA+EGECGFLAANLYAKSVFGEDALVNVSIEKQ D  LSGYIRIRSKTQGIALSLGDKITLKQKG S
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

Arabidopsis top hitse value%identityAlignment
AT4G31480.1 Coatomer, beta subunit1.2e-3389.87Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLT  SA+EGECGFLAANLYAKSVFGEDALVNVSIEKQ D  LSGYIRIRSKTQGIALSLGDKITLKQKG S
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

AT4G31480.2 Coatomer, beta subunit1.2e-3389.87Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLT  SA+EGECGFLAANLYAKSVFGEDALVNVSIEKQ D  LSGYIRIRSKTQGIALSLGDKITLKQKG S
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS

AT4G31490.1 Coatomer, beta subunit2.7e-3388.61Show/hide
Query:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
        +KSTNMKCLT  SA+ GECGFLAANLYAKSVFGEDALVN+SIEKQ D  LSGYIRIRSKTQGIALSLGDKITLKQKGGS
Subjt:  MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTCGACTAATATGAAGTGCCTGACGCCCATATCGGCATTAGAAGGTGAATGTGGTTTTCTTGCTGCTAACCTTTATGCAAAGAGTGTTTTTGGAGAAGATGCTTT
GGTGAATGTGAGTATTGAAAAGCAAGCAGATAATAAGTTGAGTGGGTACATCAGGATAAGAAGCAAAACTCAAGGTATTGCTCTCAGTCTTGGGGATAAGATCACTTTGA
AACAGAAGGGAGGCTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTCGACTAATATGAAGTGCCTGACGCCCATATCGGCATTAGAAGGTGAATGTGGTTTTCTTGCTGCTAACCTTTATGCAAAGAGTGTTTTTGGAGAAGATGCTTT
GGTGAATGTGAGTATTGAAAAGCAAGCAGATAATAAGTTGAGTGGGTACATCAGGATAAGAAGCAAAACTCAAGGTATTGCTCTCAGTCTTGGGGATAAGATCACTTTGA
AACAGAAGGGAGGCTCATGA
Protein sequenceShow/hide protein sequence
MKSTNMKCLTPISALEGECGFLAANLYAKSVFGEDALVNVSIEKQADNKLSGYIRIRSKTQGIALSLGDKITLKQKGGS