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Sgr026320 (gene) of Monk fruit (Qingpiguo) v1 genome

Gene IDSgr026320
OrganismSiraitia grosvenorii cv. Qingpiguo (Monk fruit (Qingpiguo) v1)
DescriptionB3 domain-containing transcription factor VRN1-like
Genome locationtig00153031:3967836..3968617
RNA-Seq ExpressionSgr026320
SyntenySgr026320
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595061.1 B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4264.38Show/hide
Query:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT
        AS P FFRIVL  +LEDRKLMIPKKFV+D+G+ LS+SVRLKLPDGMEWK+GLT TA NG +WLQNGWH+FAEHY LEFGSLLVF+ DG STF T+IF+P+
Subjt:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT

Query:  GSEIEYACNPNDSPGDFE-DNDDSVQSLDSFPDIQRRGRRLHFPVV
        G E EY C  NDS  +F  + +DS ++ +S P  QR  +R + P V
Subjt:  GSEIEYACNPNDSPGDFE-DNDDSVQSLDSFPDIQRRGRRLHFPVV

XP_022132593.1 B3 domain-containing transcription factor VRN1-like [Momordica charantia]1.7e-4678.33Show/hide
Query:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE
        P FF+IVLQ++LE +KLMIPKKFV DYGKFLS+SVRL+L DGMEWK+GLT TA NGA+WLQNGWH FAEHY LEFGSLLVFRFDG STFHTTIF+ TGSE
Subjt:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE

Query:  IEYACNPNDSPGDFEDNDDS
        I+Y CN NDS GDFE+ DD+
Subjt:  IEYACNPNDSPGDFEDNDDS

XP_022132700.1 B3 domain-containing transcription factor VRN1-like [Momordica charantia]5.4e-4868.31Show/hide
Query:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE
        PHFF++VLQKS+ED++LMIPKKFVRDYGKFLSSS+ LKLPDGMEWK+GL KTATNG++WL+NGWH FAEHYCLE GS+LV R DG STFHT IF+ TGSE
Subjt:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE

Query:  IEYACNPNDSPGDF--EDNDDSVQSLDSFPDIQRRGRRLHFP
        IEY+ +  D  GDF  E +DDS +SL+SFP   ++  +  FP
Subjt:  IEYACNPNDSPGDF--EDNDDSVQSLDSFPDIQRRGRRLHFP

XP_022962674.1 B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata]2.6e-4263.09Show/hide
Query:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT
        AS P FFRIVL  +LEDRKLMIPKKFV+D+G+ LS+SVRLKLPDGMEWK+GLT TA NG +WLQNGWH+FAEHY LEFGSLLVF+ DG STF T+IF+P+
Subjt:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT

Query:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV
        G E EY C  NDS  +F    ED+D++ +S       QR  +R + P V
Subjt:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV

XP_022962675.1 B3 domain-containing transcription factor VRN1-like isoform X3 [Cucurbita moschata]2.6e-4263.09Show/hide
Query:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT
        AS P FFRIVL  +LEDRKLMIPKKFV+D+G+ LS+SVRLKLPDGMEWK+GLT TA NG +WLQNGWH+FAEHY LEFGSLLVF+ DG STF T+IF+P+
Subjt:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT

Query:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV
        G E EY C  NDS  +F    ED+D++ +S       QR  +R + P V
Subjt:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV

TrEMBL top hitse value%identityAlignment
A0A6J1BT74 B3 domain-containing transcription factor VRN1-like2.6e-4868.31Show/hide
Query:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE
        PHFF++VLQKS+ED++LMIPKKFVRDYGKFLSSS+ LKLPDGMEWK+GL KTATNG++WL+NGWH FAEHYCLE GS+LV R DG STFHT IF+ TGSE
Subjt:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE

Query:  IEYACNPNDSPGDF--EDNDDSVQSLDSFPDIQRRGRRLHFP
        IEY+ +  D  GDF  E +DDS +SL+SFP   ++  +  FP
Subjt:  IEYACNPNDSPGDF--EDNDDSVQSLDSFPDIQRRGRRLHFP

A0A6J1BWP5 B3 domain-containing transcription factor VRN1-like8.4e-4778.33Show/hide
Query:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE
        P FF+IVLQ++LE +KLMIPKKFV DYGKFLS+SVRL+L DGMEWK+GLT TA NGA+WLQNGWH FAEHY LEFGSLLVFRFDG STFHTTIF+ TGSE
Subjt:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE

Query:  IEYACNPNDSPGDFEDNDDS
        I+Y CN NDS GDFE+ DD+
Subjt:  IEYACNPNDSPGDFEDNDDS

A0A6J1HFG5 B3 domain-containing transcription factor VRN1-like isoform X11.2e-4263.09Show/hide
Query:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT
        AS P FFRIVL  +LEDRKLMIPKKFV+D+G+ LS+SVRLKLPDGMEWK+GLT TA NG +WLQNGWH+FAEHY LEFGSLLVF+ DG STF T+IF+P+
Subjt:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT

Query:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV
        G E EY C  NDS  +F    ED+D++ +S       QR  +R + P V
Subjt:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV

A0A6J1HFS2 B3 domain-containing transcription factor VRN1-like isoform X31.2e-4263.09Show/hide
Query:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT
        AS P FFRIVL  +LEDRKLMIPKKFV+D+G+ LS+SVRLKLPDGMEWK+GLT TA NG +WLQNGWH+FAEHY LEFGSLLVF+ DG STF T+IF+P+
Subjt:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT

Query:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV
        G E EY C  NDS  +F    ED+D++ +S       QR  +R + P V
Subjt:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV

A0A6J1HHR8 B3 domain-containing transcription factor VRN1-like isoform X21.2e-4263.09Show/hide
Query:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT
        AS P FFRIVL  +LEDRKLMIPKKFV+D+G+ LS+SVRLKLPDGMEWK+GLT TA NG +WLQNGWH+FAEHY LEFGSLLVF+ DG STF T+IF+P+
Subjt:  ASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPT

Query:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV
        G E EY C  NDS  +F    ED+D++ +S       QR  +R + P V
Subjt:  GSEIEYACNPNDSPGDF----EDNDDSVQSLDSFPDIQRRGRRLHFPVV

SwissProt top hitse value%identityAlignment
Q2QMT6 B3 domain-containing protein LOC_Os12g400801.0e-0937.93Show/hide
Query:  IPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIEYAC
        IP KF R++G  +S +V+L+  +G  +++ + K   N  L L++GW RFA  Y LE G +LVF + G+S F   I++P+  E    C
Subjt:  IPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIEYAC

Q84R27 B3 domain-containing protein At3g189601.2e-1031.09Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE
        FF++VL  +++D+ + IP +FV+  G  LS  V L+ P G +  + L +      +W   GW  FAE + +E G  L+F +  +S+F   IF  +  E +
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE

Query:  YACNPNDSPGDFEDNDDSV
        Y   P D+    + +DD +
Subjt:  YACNPNDSPGDFEDNDDSV

Q8L3W1 B3 domain-containing transcription factor VRN18.7e-1731.43Show/hide
Query:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE
        P F +++   ++++++L +P KFV  +   LS +V L +PDG  W++GL K   +  +W Q+GW  F + Y +  G LL+FR++G+S F   IF  + SE
Subjt:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE

Query:  IEYACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRRLHFP
        I Y      S G  +   +  +    F D++     + FP
Subjt:  IEYACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRRLHFP

Q9XIB4 B3 domain-containing protein At1g494755.4e-1131.2Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE
        F +I+L   + ++ + +P +FVR +G  L+ +V L+ P G +  + + +      +W + GW  FAE + L  G  L F ++G S F   IF+ + SEIE
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE

Query:  YACNPNDSPGDFEDNDDSVQSLDSF
        Y  +  D   + E  DD  Q    F
Subjt:  YACNPNDSPGDFEDNDDSVQSLDSF

Q9ZSH7 B3 domain-containing protein At4g015801.6e-1028.36Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE
        FF++VL  +++D+ + IP +FV+  G  LS  V L  P G +  + L +      +W   GW  FAE + +E G  L+F +  +S+F   IF  +  E  
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE

Query:  YACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRR
        Y   P D+    + +DD ++      D + + ++
Subjt:  YACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRR

Arabidopsis top hitse value%identityAlignment
AT1G49475.1 AP2/B3-like transcriptional factor family protein3.9e-1231.2Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE
        F +I+L   + ++ + +P +FVR +G  L+ +V L+ P G +  + + +      +W + GW  FAE + L  G  L F ++G S F   IF+ + SEIE
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE

Query:  YACNPNDSPGDFEDNDDSVQSLDSF
        Y  +  D   + E  DD  Q    F
Subjt:  YACNPNDSPGDFEDNDDSVQSLDSF

AT3G18960.1 AP2/B3-like transcriptional factor family protein8.6e-1231.09Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE
        FF++VL  +++D+ + IP +FV+  G  LS  V L+ P G +  + L +      +W   GW  FAE + +E G  L+F +  +S+F   IF  +  E +
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE

Query:  YACNPNDSPGDFEDNDDSV
        Y   P D+    + +DD +
Subjt:  YACNPNDSPGDFEDNDDSV

AT3G18990.1 AP2/B3-like transcriptional factor family protein6.2e-1831.43Show/hide
Query:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE
        P F +++   ++++++L +P KFV  +   LS +V L +PDG  W++GL K   +  +W Q+GW  F + Y +  G LL+FR++G+S F   IF  + SE
Subjt:  PHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSE

Query:  IEYACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRRLHFP
        I Y      S G  +   +  +    F D++     + FP
Subjt:  IEYACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRRLHFP

AT4G01580.1 AP2/B3-like transcriptional factor family protein1.1e-1128.36Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE
        FF++VL  +++D+ + IP +FV+  G  LS  V L  P G +  + L +      +W   GW  FAE + +E G  L+F +  +S+F   IF  +  E  
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIE

Query:  YACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRR
        Y   P D+    + +DD ++      D + + ++
Subjt:  YACNPNDSPGDFEDNDDSVQSLDSFPDIQRRGRR

AT5G60140.1 AP2/B3-like transcriptional factor family protein3.0e-0431.91Show/hide
Query:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQ-NGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFE
        FF+  L     D  L++P  F     K L  +V ++   G  WKLG  K       ++  +GW +      L  G LL F FDGS  F+ +IF+
Subjt:  FFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQ-NGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTTCCTCACTTCTTCAGAATCGTTTTGCAGAAAAGTCTTGAAGACCGAAAACTGATGATTCCGAAGAAGTTTGTTAGAGATTATGGGAAGTTTCTGTCAAG
TTCTGTGCGTCTCAAGCTTCCAGATGGCATGGAATGGAAACTAGGATTGACGAAGACCGCCACTAACGGCGCCCTTTGGCTGCAAAATGGCTGGCATAGATTTGCAGAAC
ATTACTGTTTAGAGTTTGGTTCGCTGTTGGTTTTCAGATTCGATGGAAGTTCGACTTTCCACACCACTATATTCGAGCCAACTGGATCAGAGATTGAATATGCTTGCAAC
CCTAACGATTCTCCTGGAGATTTTGAAGACAACGATGATTCTGTTCAAAGTCTGGACAGTTTCCCCGACATCCAAAGAAGAGGGAGAAGGCTTCATTTCCCTGTCGTCAA
ACTCGTAAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTTTCCTCACTTCTTCAGAATCGTTTTGCAGAAAAGTCTTGAAGACCGAAAACTGATGATTCCGAAGAAGTTTGTTAGAGATTATGGGAAGTTTCTGTCAAG
TTCTGTGCGTCTCAAGCTTCCAGATGGCATGGAATGGAAACTAGGATTGACGAAGACCGCCACTAACGGCGCCCTTTGGCTGCAAAATGGCTGGCATAGATTTGCAGAAC
ATTACTGTTTAGAGTTTGGTTCGCTGTTGGTTTTCAGATTCGATGGAAGTTCGACTTTCCACACCACTATATTCGAGCCAACTGGATCAGAGATTGAATATGCTTGCAAC
CCTAACGATTCTCCTGGAGATTTTGAAGACAACGATGATTCTGTTCAAAGTCTGGACAGTTTCCCCGACATCCAAAGAAGAGGGAGAAGGCTTCATTTCCCTGTCGTCAA
ACTCGTAAGAAGATGA
Protein sequenceShow/hide protein sequence
MASFPHFFRIVLQKSLEDRKLMIPKKFVRDYGKFLSSSVRLKLPDGMEWKLGLTKTATNGALWLQNGWHRFAEHYCLEFGSLLVFRFDGSSTFHTTIFEPTGSEIEYACN
PNDSPGDFEDNDDSVQSLDSFPDIQRRGRRLHFPVVKLVRR